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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019073 ID=TCONS_00019073|Name=TCONS_00019073|organism=Clytia hemisphaerica|type=transcript|length=1053bp
AAAAAATGGCACTGAAGCTGATCATAAAAGCCGTTATAACAATAACTTCT
TGCTGGTGTATAGCTTTCTATTGTTCTATCTTGTCATCTATTGGTTACAA
TGATTCAGTAGCCAATGAGAAGAGGATGAGTATCGTCGATCGATGTCAAA
TGGTAGATGACACTCCACGCATGCGTGAAACTCAAAATGTAACTTATGGT
CTCGACTACTTGCAATTCAGATCGATTCCACAACTCCCGAATGGAGAACG
AACCAATGTTGCCTTTATCAATAATTCGTTACAATGTGCTGAAGTGTGTC
AAAGAGATGATCAAAAGATTGTTTTAATCACCCATTTGATCTCATTAACG
GAGCATGTTAAATCACTCGAATTTCAAAGAATAAAACCAAAAACAAGCAT
AATGGATCTTAGATGGCTTGAACTTATAAATATTTTACAACGTAATCTAA
ACCACGTGCAAATCAAACAGATTATTCTATTCACAGAATCAAAATCTGTT
GCAGATTATCTGTCAACGTTGAACCTAGATAACAGCCACAAACTTTCGAT
CCAGAATCTCCATAAAGAATTATCAGTACCAGATGCATTTGACCATGCTA
CAAGATGCTACAAAAATCACGTGATAGTCATAGCCAATCAAGACATCACA
TTCGGTGACGGTTGGCAACACTTAGATTACGAGCATTTGAGAACTAATCG
CCACGTGTATGCATTGACGCGTCACGATTCGCTATTAAACCCAAATTGTA
AGGGAAATTCACAAACGGGTTATTGCACCTATGATTACAATATGGCGCAT
GATGCATTTATATTTCATGTCAAAGACAGAATTCATAAGTCTTCTTTTCA
CGGTCTTGGTAATGAATTATACAATATACGTGGAATGGAAAATTATGTGA
TTTGGGTTTTGAGGCAGAAACTGTGTTATAATGTAACGAACCCGTGCATG
GTTTTGAAGATACATCATGAACATTGTGTTCCCATACGAAACGCTCGTGG
AACTTCAAAACAATTTGGTAATAGGACTGTATGGGAATATGCACAGCCTT
CAG Run BLAST on NCBI protein sequence of TCONS_00019073-protein >TCONS_00019073-protein ID=TCONS_00019073-protein|Name=TCONS_00019073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=350bp
KMALKLIIKAVITITSCWCIAFYCSILSSIGYNDSVANEKRMSIVDRCQM
VDDTPRMRETQNVTYGLDYLQFRSIPQLPNGERTNVAFINNSLQCAEVCQ
RDDQKIVLITHLISLTEHVKSLEFQRIKPKTSIMDLRWLELINILQRNLN
HVQIKQIILFTESKSVADYLSTLNLDNSHKLSIQNLHKELSVPDAFDHAT
RCYKNHVIVIANQDITFGDGWQHLDYEHLRTNRHVYALTRHDSLLNPNCK
GNSQTGYCTYDYNMAHDAFIFHVKDRIHKSSFHGLGNELYNIRGMENYVI
WVLRQKLCYNVTNPCMVLKIHHEHCVPIRNARGTSKQFGNRTVWEYAQPS Run BLAST on NCBI transcript from alignment at sc0000317:154027..155079 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019073 ID=TCONS_00019073|Name=TCONS_00019073|organism=Clytia hemisphaerica|type=transcript|length=1053bp|location=Sequence derived from alignment at sc0000317:154027..155079 (Clytia hemisphaerica)
CTGAAGGCTGTGCATATTCCCATACAGTCCTATTACCAAATTGTTTTGAA
GTTCCACGAGCGTTTCGTATGGGAACACAATGTTCATGATGTATCTTCAA
AACCATGCACGGGTTCGTTACATTATAACACAGTTTCTGCCTCAAAACCC
AAATCACATAATTTTCCATTCCACGTATATTGTATAATTCATTACCAAGA
CCGTGAAAAGAAGACTTATGAATTCTGTCTTTGACATGAAATATAAATGC
ATCATGCGCCATATTGTAATCATAGGTGCAATAACCCGTTTGTGAATTTC
CCTTACAATTTGGGTTTAATAGCGAATCGTGACGCGTCAATGCATACACG
TGGCGATTAGTTCTCAAATGCTCGTAATCTAAGTGTTGCCAACCGTCACC
GAATGTGATGTCTTGATTGGCTATGACTATCACGTGATTTTTGTAGCATC
TTGTAGCATGGTCAAATGCATCTGGTACTGATAATTCTTTATGGAGATTC
TGGATCGAAAGTTTGTGGCTGTTATCTAGGTTCAACGTTGACAGATAATC
TGCAACAGATTTTGATTCTGTGAATAGAATAATCTGTTTGATTTGCACGT
GGTTTAGATTACGTTGTAAAATATTTATAAGTTCAAGCCATCTAAGATCC
ATTATGCTTGTTTTTGGTTTTATTCTTTGAAATTCGAGTGATTTAACATG
CTCCGTTAATGAGATCAAATGGGTGATTAAAACAATCTTTTGATCATCTC
TTTGACACACTTCAGCACATTGTAACGAATTATTGATAAAGGCAACATTG
GTTCGTTCTCCATTCGGGAGTTGTGGAATCGATCTGAATTGCAAGTAGTC
GAGACCATAAGTTACATTTTGAGTTTCACGCATGCGTGGAGTGTCATCTA
CCATTTGACATCGATCGACGATACTCATCCTCTTCTCATTGGCTACTGAA
TCATTGTAACCAATAGATGACAAGATAGAACAATAGAAAGCTATACACCA
GCAAGAAGTTATTGTTATAACGGCTTTTATGATCAGCTTCAGTGCCATTT
TTT Coding sequence (CDS) from alignment at sc0000317:154027..155079 >TCONS_00019073 ID=TCONS_00019073|Name=TCONS_00019073|organism=Clytia hemisphaerica|type=CDS|length=1050bp|location=Sequence derived from alignment at sc0000317:154027..155079 (Clytia hemisphaerica)
TGAAGGCTGTGCATATTCCCATACAGTCCTATTACCAAATTGTTTTGAAG
TTCCACGAGCGTTTCGTATGGGAACACAATGTTCATGATGTATCTTCAAA
ACCATGCACGGGTTCGTTACATTATAACACAGTTTCTGCCTCAAAACCCA
AATCACATAATTTTCCATTCCACGTATATTGTATAATTCATTACCAAGAC
CGTGAAAAGAAGACTTATGAATTCTGTCTTTGACATGAAATATAAATGCA
TCATGCGCCATATTGTAATCATAGGTGCAATAACCCGTTTGTGAATTTCC
CTTACAATTTGGGTTTAATAGCGAATCGTGACGCGTCAATGCATACACGT
GGCGATTAGTTCTCAAATGCTCGTAATCTAAGTGTTGCCAACCGTCACCG
AATGTGATGTCTTGATTGGCTATGACTATCACGTGATTTTTGTAGCATCT
TGTAGCATGGTCAAATGCATCTGGTACTGATAATTCTTTATGGAGATTCT
GGATCGAAAGTTTGTGGCTGTTATCTAGGTTCAACGTTGACAGATAATCT
GCAACAGATTTTGATTCTGTGAATAGAATAATCTGTTTGATTTGCACGTG
GTTTAGATTACGTTGTAAAATATTTATAAGTTCAAGCCATCTAAGATCCA
TTATGCTTGTTTTTGGTTTTATTCTTTGAAATTCGAGTGATTTAACATGC
TCCGTTAATGAGATCAAATGGGTGATTAAAACAATCTTTTGATCATCTCT
TTGACACACTTCAGCACATTGTAACGAATTATTGATAAAGGCAACATTGG
TTCGTTCTCCATTCGGGAGTTGTGGAATCGATCTGAATTGCAAGTAGTCG
AGACCATAAGTTACATTTTGAGTTTCACGCATGCGTGGAGTGTCATCTAC
CATTTGACATCGATCGACGATACTCATCCTCTTCTCATTGGCTACTGAAT
CATTGTAACCAATAGATGACAAGATAGAACAATAGAAAGCTATACACCAG
CAAGAAGTTATTGTTATAACGGCTTTTATGATCAGCTTCAGTGCCATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019073-exon-sc0000317-1491911889:154027..155079 | TCONS_00019073-exon-sc0000317-1491911889:154027..155079 | Clytia hemisphaerica | exon |
| TCONS_00019073-exon-sc0000317-1510915933:154027..155079 | TCONS_00019073-exon-sc0000317-1510915933:154027..155079 | Clytia hemisphaerica | exon |
| TCONS_00019073-exon-sc0000317-1575043694:154027..155079 | TCONS_00019073-exon-sc0000317-1575043694:154027..155079 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000317 | supercontig | sc0000317:154027..155079 . |
Blast
The following BLAST results are available for this feature:
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