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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001995 ID=TCONS_00001995|Name=TCONS_00001995|organism=Clytia hemisphaerica|type=transcript|length=1000bp
AAAAGAGTCAGTGCAGTATCTCAAGCAAGAGTATAATATTAGCTACATGG
CGGttatttatttcaaagaaaGTGACAAAGATAATGAGTTGGTtcgaaaa
ccttgtaaaaaTCGCCCTGAAACTGCCTTTTGCTTTTACGTTGATGCTGA
CAAGAACAATCAGAATGATTGTATCAAAGAATTGTTTTTGGATATCAATG
ATAAGGATGCCGTTAGTAAAGCAATGAATTTCATGGTGAAAGACCCTCAT
TTAAGAGTACTTATGGCGTATGGATTTGGATCAACTATCTTTAGATTTGA
ACACCAAGCAGGTAGTAGAGAGTACACTAATGTGAACGGAGGTGACTTCT
ATATTTCCTATTTTGAAAGGAAATTGACAGATATAGCCTCTCTAGATGAA
AATGGCAAGACCAGATGGGGAAGATCAATTATCAACATCCCAGGAGAGCA
TGCTATCAACGAATTTTTGGGTTATGTTTATGAGCTGACAAAGAAATTGG
TCAACAACAAATGGGTCTTTTCGGCCTTAGAAAACACTGGTGTTATTGCT
GACTTAGCTCAGAAAcatgaaaatgttttgaagCTTTTGTTAAAAGACTG
GAAGACTGGTGATCAATTGTCATTCGATGATTGGAAACAAATACCTGAAG
CTTTTCGAAAACAAATAGCTGTTGAGATCAGTCAAAATCGAATATTAATC
AAGAAGTTTATACAATATTGGAAACAATCGACCTATCTTAACATTGTAAC
CCCAGAGGACCTATTAGCAATGAGGGTTTACAGTCCAAAGAAAGCACTTG
AAGCCAAACCATACTgtaatatgacaatacctagaTGTAGCAAAGGATTT
GAATTAAAACATTCACTTTATAAAGAAGAATTTTGGAACAATAGTTATGG
TTGGCATTGTGCTAAATGTCCTCCAATGACTTACAAAAATACCAAGGGCA
ATTCCGAATGTCAGCCATGTATAGTTCCTTTGCAAACAGATGAAGCTCGG Run BLAST on NCBI protein sequence of TCONS_00001995-protein >TCONS_00001995-protein ID=TCONS_00001995-protein|Name=TCONS_00001995-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
KESVQYLKQEYNISYMAVIYFKESDKDNELVRKPCKNRPETAFCFYVDAD
KNNQNDCIKELFLDINDKDAVSKAMNFMVKDPHLRVLMAYGFGSTIFRFE
HQAGSREYTNVNGGDFYISYFERKLTDIASLDENGKTRWGRSIINIPGEH
AINEFLGYVYELTKKLVNNKWVFSALENTGVIADLAQKHENVLKLLLKDW
KTGDQLSFDDWKQIPEAFRKQIAVEISQNRILIKKFIQYWKQSTYLNIVT
PEDLLAMRVYSPKKALEAKPYCNMTIPRCSKGFELKHSLYKEEFWNNSYG
WHCAKCPPMTYKNTKGNSECQPCIVPLQTDEAR Run BLAST on NCBI transcript from alignment at sc0000012:380879..381878 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001995 ID=TCONS_00001995|Name=TCONS_00001995|organism=Clytia hemisphaerica|type=transcript|length=1000bp|location=Sequence derived from alignment at sc0000012:380879..381878 (Clytia hemisphaerica)
CCGAGCTTCATCTGTTTGCAAAGGAACTATACATGGCTGACATTCGGAAT
TGCCCTTGGTATTTTTGTAAGTCATTGGAGGACATTTAGCACAATGCCAA
CCATAACTATTGTTCCAAAATTCTTCTTTATAAAGTGAATGTTTTAATTC
AAATCCTTTGCTACAtctaggtattgtcatattacAGTATGGTTTGGCTT
CAAGTGCTTTCTTTGGACTGTAAACCCTCATTGCTAATAGGTCCTCTGGG
GTTACAATGTTAAGATAGGTCGATTGTTTCCAATATTGTATAAACTTCTT
GATTAATATTCGATTTTGACTGATCTCAACAGCTATTTGTTTTCGAAAAG
CTTCAGGTATTTGTTTCCAATCATCGAATGACAATTGATCACCAGTCTTC
CAGTCTTTTAACAAAAGcttcaaaacattttcatgTTTCTGAGCTAAGTC
AGCAATAACACCAGTGTTTTCTAAGGCCGAAAAGACCCATTTGTTGTTGA
CCAATTTCTTTGTCAGCTCATAAACATAACCCAAAAATTCGTTGATAGCA
TGCTCTCCTGGGATGTTGATAATTGATCTTCCCCATCTGGTCTTGCCATT
TTCATCTAGAGAGGCTATATCTGTCAATTTCCTTTCAAAATAGGAAATAT
AGAAGTCACCTCCGTTCACATTAGTGTACTCTCTACTACCTGCTTGGTGT
TCAAATCTAAAGATAGTTGATCCAAATCCATACGCCATAAGTACTCTTAA
ATGAGGGTCTTTCACCATGAAATTCATTGCTTTACTAACGGCATCCTTAT
CATTGATATCCAAAAACAATTCTTTGATACAATCATTCTGATTGTTCTTG
TCAGCATCAACGTAAAAGCAAAAGGCAGTTTCAGGGCGAtttttacaagg
ttttcgaACCAACTCATTATCTTTGTCACtttctttgaaataaataaCCG
CCATGTAGCTAATATTATACTCTTGCTTGAGATACTGCACTGACTCTTTT
Coding sequence (CDS) from alignment at sc0000012:380879..381878 >TCONS_00001995 ID=TCONS_00001995|Name=TCONS_00001995|organism=Clytia hemisphaerica|type=CDS|length=999bp|location=Sequence derived from alignment at sc0000012:380879..381878 (Clytia hemisphaerica)
CCGAGCTTCATCTGTTTGCAAAGGAACTATACATGGCTGACATTCGGAAT
TGCCCTTGGTATTTTTGTAAGTCATTGGAGGACATTTAGCACAATGCCAA
CCATAACTATTGTTCCAAAATTCTTCTTTATAAAGTGAATGTTTTAATTC
AAATCCTTTGCTACAtctaggtattgtcatattacAGTATGGTTTGGCTT
CAAGTGCTTTCTTTGGACTGTAAACCCTCATTGCTAATAGGTCCTCTGGG
GTTACAATGTTAAGATAGGTCGATTGTTTCCAATATTGTATAAACTTCTT
GATTAATATTCGATTTTGACTGATCTCAACAGCTATTTGTTTTCGAAAAG
CTTCAGGTATTTGTTTCCAATCATCGAATGACAATTGATCACCAGTCTTC
CAGTCTTTTAACAAAAGcttcaaaacattttcatgTTTCTGAGCTAAGTC
AGCAATAACACCAGTGTTTTCTAAGGCCGAAAAGACCCATTTGTTGTTGA
CCAATTTCTTTGTCAGCTCATAAACATAACCCAAAAATTCGTTGATAGCA
TGCTCTCCTGGGATGTTGATAATTGATCTTCCCCATCTGGTCTTGCCATT
TTCATCTAGAGAGGCTATATCTGTCAATTTCCTTTCAAAATAGGAAATAT
AGAAGTCACCTCCGTTCACATTAGTGTACTCTCTACTACCTGCTTGGTGT
TCAAATCTAAAGATAGTTGATCCAAATCCATACGCCATAAGTACTCTTAA
ATGAGGGTCTTTCACCATGAAATTCATTGCTTTACTAACGGCATCCTTAT
CATTGATATCCAAAAACAATTCTTTGATACAATCATTCTGATTGTTCTTG
TCAGCATCAACGTAAAAGCAAAAGGCAGTTTCAGGGCGAtttttacaagg
ttttcgaACCAACTCATTATCTTTGTCACtttctttgaaataaataaCCG
CCATGTAGCTAATATTATACTCTTGCTTGAGATACTGCACTGACTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001995-exon-sc0000012-1491911889:380879..381878 | TCONS_00001995-exon-sc0000012-1491911889:380879..381878 | Clytia hemisphaerica | exon |
| TCONS_00001995-exon-sc0000012-1510915933:380879..381878 | TCONS_00001995-exon-sc0000012-1510915933:380879..381878 | Clytia hemisphaerica | exon |
| TCONS_00001995-exon-sc0000012-1575043694:380879..381878 | TCONS_00001995-exon-sc0000012-1575043694:380879..381878 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:380879..381878 . |
Blast
The following BLAST results are available for this feature:
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