XLOC_045745 (gene) - C. hemisphaerica

Overview
NameXLOC_045745
Unique NameXLOC_045745
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_97:619307..622662+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045745 ID=XLOC_045745|Name=XLOC_045745|organism=Clytia hemisphaerica|type=gene|length=3356bp|location=Sequence derived from alignment at scaffold_97:619307..622662+ (Clytia hemisphaerica)
ttagaaaagaaaaaatgaaatttgagaaaatacaaaaTGTACGTAATAGC
AGTTTTAATATTGAGTTTGATAATGACTACACAAATACATGGAAACTGTT
TAACATCTTGCCAAGATGAAGCTGGATGTGTGGATAATTTGGATCCTATC
TCAAGAAGTATAGGAATTAACAATGGTTTCATCTGCTATCAATATAATAC
ATGTTTCAATAAATCATCGAGCAATAGTTCAAAAGTTCCAGTCCAACAAC
ATCCATTAGAAATATTATATGGACAAAATATAACTTTCAGTATCAGTGAT
TTTGGATTCAATAATTTCACTTTTAGAGTTTTTCAAAGTTCACGCTACAC
AGATTTTGCGACATGCAATTTATCCATACCTTTGCAGTATAGCATCATAA
ACAATAGCTTAATAGAGCTACCACCTATGAAGTCAGGCATTCATTATCTT
ATGTTTGAAAGTAACCATATATTATACACTTGTCAGTTTGGTTTTCGTAT
ACAGTTGACGATTTATGAAAATGAATGCCATTTTCAGAACAATAAAGACC
CTTGTTCTTTGAAAGGATTATGTAAATTAAATCGAGAATATAATAAATAT
CAGTGTCACTGCTGTGAACCTTATTACGGTAAATCATGTCAAGAAATAGA
TGGTTGTCTACTACAAACATCACCATGTTCTAATAATGGAGAATGTAATG
ATTATGTTGCAGGATTGATACATCCAGGCCTTAATTGCTCTTGTCATGAA
CAGTTCCATGGTACCACGTGTGATCAATGTATTTCTGGTTATACAGGAGC
TAATTGTTCTATTGATATAAATGAATGTAATCAAACTTCAACCATTTGTA
ATTATGGGCAATGTAACAATACTGAAGGTAGTTTTCTTTGTCAATGTCCT
GTCAATGTTACGGGGAAATTATGTGACACAGATTTATACGATAATTGTCT
ATCATCACCTTGCCAAGGAACAAATAAGACATGTATTGATAAATATGGTG
GCTTTGAATGTCAATGTCCTGTGGATTTTACAGGGAAGTTTTGTGAAACA
AAGATTGATAATTGTAAAGATGGGAGCTGCGATGTTGAAGGTACTTTGAA
TTGTGTTGATGGCTTTGGTGATTACAAGTGCAATTGTAAATCAGGATATA
CAGGTATATATATAACCTAATTTTAAGTGTTCCATATTCCCCATAGGCTG
AAATTTGTCTCAATAAGATCcaaattttcaactttccaTTTTGTCAGTAT
TAGGTTTTCCACCACATAACCTTCTCTTCTAGACCCCTTGCTTATAGCCA
CATAAAGATAATTTCTTAAAAGTTCTCAATGTTGTATTGACAGCTACAGC
ACCCAAAATCTGCTAATCTTTAATTAAAATCACTTGCTACAGTTTTTCCA
GCTATCATAAAGAATTACTGTGTGAAATgtaattttattatttgttattt
taatttttcaggaaaaaactAACTATCATAAATACAATTTCTAAATAGTG
TTTCACTCTGGCGCAAACTTCAGACAATGCAGTATATTGTagattttaat
tcaattttacaTTACATATTATTACTTCTTGCAttatattatttgaattt
aATCTGCAAAGGGCTTTTCCCGAAAAACTTTTTACCCCGCCCattgttga
ggatattgatttttcgaagtatcaaaCCCcttggatatcctctcttatca
agatgcttaccccctggatatccgatatccgatatcctcaataCACAGCA
TTGTCTAAAAATTGCGCTAGCATGAAGCACCATGTAGCAAGTTGATTGTT
AAAATCTGATATTTTGttcaaatcttttcaaattttctcgAACACTTTgt
gattttgtttatttcacTATGATTTTCTAGGACAACATTGTGAGCAAAAC
ATCAACGATTGTATTGAGGTGAATACCAAAAATAGTAGTAAATGTCAAAA
TGGTGGCATCTGTATTGATTTATTGAACGGCTTCAATTGTCATTGTTTAC
CTGGGTACGACGGTGATCAATGTCAGAATATAGCCAACAAATGTCAAGCC
TTAGAACCATGTAGAAATGGGACTTGTGTACGCATTGGAACCAATAAACG
AGATTATGTTTGCAATTGTTTCGAAGGATACGAAGGACAGAATTGCACTG
AGATTGTCAATAAATGTCGGATATTTCCCTGTCAAAATAATTCCACGTGT
AATTTTACGTTTAACGATTACACATGTGACTGCTTGCNCCCTGTCAAAAT
AATTCTACGTGTAATTTTACGTTTAACGATTATACATGCGACTGCTTGCC
AGGCTGGGAAGATAAGAATTGTAGCTCTAATATAGATGCATGTGAATTGT
TGAAACCATGTGAGAATAATGCAACTTGTGTTGATTCTATACATGATTTC
GATTATGTTTGCCAATGTTTGACTGGTTTCACAGGGCAGAATTGCTCCGT
TAATATTGATGATTGTATTGGCGTGAATTGCATTAATGGGCAATGTATTG
ATGGTATCAATTCAAGTTATTGCCAATGCGATGATGGTTGGTTTGGTGAA
AAATGCAATGTTGATAAAGATTATTGTGGATTGTCACCCTGTGTAAATGA
GATTGAATGTATTAATGTACCAAATACACCTGGATTTAAATGTATATGCA
AATCTGGATATACTGGTCAAAGCTGTGTTGAAAATATTGATGATTGTATA
AACAACACGTGTCAAAACAATGCAGTATGTCGTGACTTGATAAATGACTA
CAATTGTACATGTGCACCTGGTTATCAAGGACAATTTTGCGAGATTGATA
TAAATGAATGTGATAATGACCCATGTTTAAACAATGCGACATGCCAAAAC
TTGGTAAATCAATATTTTTGTGCATGTAAGCCTGGCTTTGAAGgtaaaaa
ttgtgaaattaaCATTAATGAATGTATTTCAGACCCTTGCCAACATAATT
CAACTTGCATTGATAAAGTTAATGATTTCGAGTGTAATTGTACTGAAGCG
TATTCTGGAAAAGATTGTGGTATCCATGTATGTTCTTTGAATGATACATG
CTTGAATGGAGGGCAATGTGAGGATACCGGTACTGGTTTCAAATGTCATT
GCCCACAGGAATTTACCGGAAAATATTGTAATATCTCAGTCAATGAATGT
GAAAACTCTACCATATGTTTACATAATGGGGTATGTGTTGATTTATATAA
AGGATACCAATGTCGTTGTGTTTTTCCATTTAATGGAACCAACTGTGAAA
CTCATGAATGTGATACAGACATTTGTCAAAATAATGGATCTTGCATTAAA
AGTAATACAAATTTCACTTGTGATTGCGTTTATCCTTGGACAGGCCGTCA
TTGCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073668TCONS_00073668Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073668-proteinTCONS_00073668-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:619307..622662 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.89	0.91	1.72	1.37	10.88	6.73	4.95	5.94	3.22	2.72	3.37	3.09	0.84	0.54	0.26	0.3	0.36	0.72	1.04	1.39	1.96	2.11	0.69	1.65	2.12	2.55	2.08	1.25	0.43	0.49