XLOC_045147 (gene) - C. hemisphaerica

Overview
NameXLOC_045147
Unique NameXLOC_045147
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_82:623365..633046-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045147 ID=XLOC_045147|Name=XLOC_045147|organism=Clytia hemisphaerica|type=gene|length=9682bp|location=Sequence derived from alignment at scaffold_82:623365..633046- (Clytia hemisphaerica)
GCTCCTTTTATGGAGTCTGGTCGTCGCGTTTCCCGAAATGGTAGCCTGCT
TAGAGTATTTCAAAGAATTCAGCTGAAGCACTGACCGCCCATTTCATCTG
CAAAAACAAGGAAACAGATAGAATATACATAATAATTCAAGCAAAATGGT
AAGTGTATGTTAAACCTACTTTTATTTAATTATAATTCATGCTTTCATTG
ATGCTCCTCGAATCTCCTCAATTAAATTTGATAACAACTATATTTATTTA
TGAAGAATCCAGTTCCTCCAAGAAGTTGTTGATTTTTAGAAGAATATTTA
TAGTGGTGTCATGAGGAGGTTTTGCTAATCTCCAAACAAATTGTGCCCTC
TGAATGCTATGGCGCCATATGCAGTCAACTGGCTATGTGCAAATTTGTAG
TAGTTTGATAGATCAAAGTACTGTAATTTGGTCTGATATCGACACCCCTT
TTCTAATTGGTAGGGTGGTCAGGCCAAAATTTTCCACTCAAATTTTGAAA
ACCAAACTAATTTTATTTGAAAGTCCTTACCTTTGTGAGAAAAATGAGGG
GTCATTTGTTAAAATTGGTTAAGTAGTTCCAAAGTTATTCCANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGCGGTCTGAAAAT
CGGCCCGATGACTGTTAAACTTTAGCCTATCGCTAATGAGCTGGAAATGA
TAGCTAAAAACAAATTTTACCAATGAAAAGCTGAAAACCTTAGCTTTCCA
ACGATATATGGTAGTCCTGATAAAAATTTCAGGAAAGTGCCGAAATATCG
AAATTTCTTTTTTTTTCTCAATTTAAAGACGGCCCATAGATTATCGAAAA
GGCTACCACGTGACAAACTAAAGTACTATCTTCCCTGCGTTTTATAAAAA
AAACCGCGAGTCTATAACTAATCCAGCTCAATAGCGATAGCCATTTGAAA
AATGGNATAAAAAAAACCGCGAGTCTATAACTAATCCAGCTCATTAGCGA
TAGCCATTTGAAAAATGGTGGTCAAGGTAGACGGGGGTGCCACGAATTCC
GAGTCACCATTTTTTCACCTTGATGTCTAATAAATGGTATATCTTTTTAT
TTAAGGTAGGTAATGGGATGGGGTTTTTTTCTTTGTTTTCTCTGATAAAT
TCTGAGTATTTAAAAAAAAAGAATGAACAAGTTTGGAGTTTTTAAGGATA
AGTTATGATGGATGGAATGTTCTAATTTTGATTTTCGACTTGTTCCACAC
AAAAAATGCCGACGAGTGCGCACCCTATAATTGGGCTCTTCCAGAAAAAA
ATTGATATAGGGGGTGGACGACAGGAATTTTCAGATAAAAAGCACTCGGA
AATCCAGTCAATTTTTCAAAGTGCTTTGGAAACTTCGCTCAATTTATTTG
AACCCTTGGAAATTCCACATCAGCTGGGGGGCGGCCTGGGAGACCCGTCT
AACTCCTGTTAGGGCAAAATTTCAAACACTCATCTATAATCACAAAATAG
GTCCATCTGAAAAAGGGTAAATAATGCAAGAAAATGAGGGGTCATAAAAC
ATAGACCTCTCAGAAAAAAGCGGTTCTGAAGATATGCCATTTTTAGTGGC
TTAAAAAACAGCTCTTTCAGTAACAAATGGCCTAGGCTAAATGGGTAAGA
GCTGATGGCACCAAAAACAGTGAAAAAAACAGGGGGGTCAGGGTCCAGGA
TACCAACCCAGGGCCCAAAAACCTGACTTTTTCGAGATTTGAAAGTAGTA
GACACCACCACCCCTATAAAAAGCCCCTGGTATCAATACCAACTTGAAAA
CCCCAATTTTCTAAAAAAGGGTTGACCCACCCCCCCTAAATTGGTATCGA
TACCAATATGAAAATCCTGATTTTCTGAAAAAGAGGGGATCCACCCCTTA
AATTGGTATCGATACAAACTTGAAAATCCCAATTTTTCTGAAAAAGGGGG
ACCCACCCCCCCCCTAAATTGGCAATCAGTAAAAGTAAGTAAGTATATGA
GTATATTCATTTGGTGGCTGTCGGTGGAGCCGGGAGTGAGGGAGTCTATC
CCCTTTTCTATTTGCGCTAGACCTGGGAGATCGAATGCTGAGGTGGAGCG
CCACACCTACTCCTAGCTCCCAGTAACTTACCGCTTAGATGTGGGGGGCG
TACGGTTTTTCGGAATTGCGGAAATCGGCCCTTTTTTCTTCGGAATTTCG
GAATTCATGCAAAATTCCTTCGGTATTTCGGAATTCTGAAACTGTTTCGG
TATTGGAAATCCATGAATTTTTGCTTCGAAATTTCGGTATTATTAAGTTT
TTATCCCCTTTTTTCGGAATTCATACATGAAAAATCAAATTTGATTAAAA
ATTAGTCAAAACGAGGAAAAAAACCCTAAAAAATCGGTATCGGAATTGCA
AGTATATTTTTATGGAATTTCGGAAATTTCGGCAAAATTATTCGGTATTT
CGGAAATCACAAACCCCGTACGCCCCCCCCCTTAGATCAGGTTACCCAAT
CTAAGCTACTCATCCGCTGAGTTGGCGGTGACCGGGATTGAACCCACAAA
CCTTAGATTGTAAGGTGAATGCTCTACTGACTGAGCTACCCGGTAAAAAT
GCAAGAAGTTATATGCATAGGATACTGCATACAAGGGATGCTAAACAAAA
TCTGTGGACGTTTTTATTCAAAGAACATTCCTCTTATTAATCACTTATAT
TATATTATGTACCCCACATTAGACTCCTGAAAATGAAAACAAGTTTTTCT
TATTCTAACACAACAAAAATTAAGTTTCTTGAACTGAATTGGCAAAATGT
ATCAAATTCATAAAACTAGTTGATAAACTAGACTAGATAAAAAACTCATT
GTAATAGGTGCGCCTATAGAGTCTTTGTAACATAGCCTATATGATCAACG
TTATGTACAGAAAAATTTCATTACGACTAAAAAAGTTCTAGGATCTGCTA
AGACTTGATTCAGTTTCTTCAACTCTAGTTTTGAATAAATTTTGGTTGAT
TGAAAGGATTGAGAGCAGCAAAAGTTAAATAAAAATTTTAATTAGAGAAT
GAAGAATGTNTAAATTTTGGTTGATTGAAAGGATTGAGAGCAGCAAAAGT
TAAATAAAAATTTTAATTACAGAATGAAGAATGCTTTTATATGGAATCAG
GGTATAGTGAAAACGATTCAAATGAGTTTTTATACTTACATTATACAACG
TTTTAAGTCAGATACCAATTTCAAATTCAGCAAAAATTAAAAAAAGGGGT
ACCCACCCCCTCATTTTGGTATCGAAACCAACTTAAAGATTCCCTAATTT
TCAAAAAAAGGGGGACCCACCCCCCCTGAAAAAAACAATTTTTCAGATTC
AAAATTTAATATCTTTTCAACGGCTTATTAGAAGGAGAGTTGGACATGGA
TGTAAGCTTCCAAGTTTTGAAAAAAAAATTAAACAATTATTTTCTGGAAC
ATGTGTATTTTACAGACCCACCAGCTAATTCAAAGATCAAATTAAAAATT
TGATCAAAAAAGGTGATTCCATGGTCCGATTTACCTGAAATTTTGCACAC
GAGCTGGGATTCATGAAACTAGTCTAAATCTGAAATTTCAAAATTTTCGG
AATATCTGGCAGTATTTTACAGACCAGTCTTTCTACACAATTTGCTCAAT
CTAGCGTGTACCTAATGCGCAAATTTTGCACACGAGCCACATATCAAAAT
TGAAAACCTAATTAAATAGTCCCACCCCATGTCTGAAACTTTATGAGATT
TTATGAGATTTCCAAAACTATGCCATTAGTTAACAAGTTTTTTCCCAATT
TCTTGAAAAAAAATTTGCAAAGCAGATTCGAGAGTTTCTTTTCTTAGAAA
AATTTCCTCGCAGAGAGGTCCAATAAAATTTGAAACTGGCAACTCGTGAT
ACAAAATTTCTACAGGTTGATTAAGTTTGGAGAAGTTTTTGCTTCTTTGA
AATGAAAGTTTTCATTTTCCTATGAAAATTTGAGGGCTTTCCTATTTTAG
AAACGTTTGTATCTGGAGGGGATAAATAAGCTGAGACAAATCATTGTATG
TTGCTTTGTTGGAGCTAACATCCCAAAAATCTGGAATTTTCAGTTAGTTT
GTTTACATTTTCTGCCATTTTGAGAAAGAAAAAAAGACCAATCAAAAGGC
AATCAAAAGTTCAAACGTCAAATGACGTCACATACAAATCAAAAAATTTG
AAAAAAGTTAATGAGAAAATTTGTTTTACCATACCATAGAAAAACTGACT
CATACGTTTGAGCAGAATAAGTTTTGGAAAGACAAATTATATGGCTGAAT
AGCAGAAGCATTCAGCTTTGATTTGATGCCATGCATTAGTAAAAATGTTG
TGAAATTCCTACCAAAAATTTCAAACCAAAACTTAGTTTTCAATTTCTTG
GCTCTTGGAGATCCTTCTTTTTTTCATGCGTGGATTCAAAACAAACTTGA
ATCACTAGGGAAGACAATAGTGAAAAAATTATAGCATTTAGTTACGAATG
ATAATAGAAAAAACGGTAGCCAGGTATTTTTGTAGATGCCAAATCTGGTC
GCAGAATTTTATTGGCCTTTAAACAATTGTTGAAATCACGTGATATTATT
GTTGGACCTACCTCGGTGGAGGTCCTATAAATTAACCGTTGTATGTTCGT
TCGTTCGTCCATCCGTTCGTTTGTTCGTTAGTTACTAGCTTTTCTCGAGA
TTGGCTCATTAGTTTTTTCTGATTTTTTACACAAAGATGCACAACTATAA
ACCCTCGAAAAAAATTTTCGGCAAATTTGGGCCAAAAAACGGCTAAAAAA
CTGGTTTTTTGGACTTCGTGAAATATTGGATCATTGTTTTTTTCTGATTT
TTTGGATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTAAAAAAA
GAATTTTTCGGCTCAAAAATTGCATGTTTATCTATAAGAATCACTCACTA
TTAATAAGCATACATCAATGTTCTCTTAGTCAAATTACTCAATTTTTTTA
TGAGATAGATGTTTTTTTGCTCACAAGGGCTTACTTTTGAAGAATATGTG
TGTTTAGACATGGAATTTTGGCTGCTTGGCGTGTTTTTATAGAAAAACTG
GCCAAATTCGATATTTTTTGTAAGCACATTATCAATTACTTAGGTATTAG
CTTTACTCGAGGTTGGCGCTTTCATTCTTTATGATTTTTTGCACAAATAT
GTATAACTATAAACCCTCGAATGTGACGGAGCCCCATTTTTGAAAAAAAA
AATTGGGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGAGATTTTGAA
CTTGGTGAAATATTGGATCATTGTTTTTTTCTGATTTTTTGCATTAAAGA
AGGGAAAATATGGCTCAAGCAGATTTTTGTAAAAAACGAATTTTTCAGCT
CAAATAACNAGGTAAAAGATGGCTCAAGCAGATTTTTGTAAAAAACGAAA
TTTTCAGCTCAAATAATGCACATTTATCTATAAGAATCACTATTAATAAG
CATACATCAATGTTCTTAGTCAAATTACTCAATTTGTTTTAACTTTTATG
AGGTAGATGTTTTTTTGCTTGCTTGAATATATGAAATGAATATTTCAAGA
GCATGAAATTTTGGTTTCTAAATGATTTTTTATAAGAAACAAACAACTAA
TTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTCAC
GCTCACATAGATATCAATTGTATGTGTTAAATGCATAACTAGGTAGGTCC
ATAAAAGTATCACTTGTTTTGATTGGAAGTGCGCGAACCTGATTGGCTAA
CCTTATCAACGGCTTTTTTGGCTTTTTTGTCAAAAATACCATACTCTCAA
CGAATAGCTTCTGATGGGATTTTTGCTTATGTGGTGTAAGTTTGAATAGA
GAGTATGGATCTCCAGACTAATTATACATAATTTGTCAAAAGTTTGAAAA
TTCCAGAAATTCCATATTTTTCTACCAAAAAATTGATTTTGTATTGGAAA
TCCAGGAGTTTTAATTGCTTTTGTTTTGGAAATCCAGGAGTTTTAATTGC
TTTCGTATTGGAAATCCAGGAATTTCAAAAAAACATTTTGCCTCGGAATT
CTGCCGTAGTCCACCCCCCTGTAACAGACTTTTTTACTTTATTCTTCATG
GACATTCTCAAGTAAAAAAATTCGAAGTCTATTTTCTTTTGTCTACCTTT
TTTGTCTAACTTTCACATGAAGTTTTTCAGGGAGTTTCTAAACATCAACC
AGAAATTGCGACTACGACCAGCGACCACAACCGGCGACCAGATAAATTTG
TATTATAGAGTTTATCTGCTCTCTCCACCGTAGAGAATGTTTAAATCAGA
AATTCTAAAAAGTGACCTTTGAAGTAACCAGTCATTTTCTTGACAAAGTG
ACACTATTTGACAAAAATATTGACAGGGTCATTAAGTATGATGTTTGTAA
GCTTTGTCAAACCAAATATTTTAATTATGCTGAATGAGATGCCTTTAGTA
TGAATATAGACAGTTTTAGAGATATGAGTCTAATCGATTATCCTATTGTC
TTTATGCTGACAAAATGACTAATTTCAACAGAAATAACAATCTGATGACT
GATGATGAAATGCAGAGCTTCTCAAACCATTTTCAAAAAATTTTGTGCAA
CTAATTATTGTGATGCTGATAATACAAAAGGATAGAAATTGACACTATAA
TCAATTTCAAGAGGGTCGAAATGGTTGTTTTACGTATTTGGCACGTGGCT
TTAATTAGATGAGACAGGGGTGAGCTTACTCTTCAATATTAAATATATTC
AAATGATTAGTAGAGACACTCTACGTTGGAGAAAGAGAAAAAACTCGATA
AACCAAATTTATCTGGTCGCTGGTCGTGGTCATCATTTCTGGTCGACGTT
TAGAAACTCCCAGTTTTTCATTCATATTGGTTCATCAAACAAAAAGTATC
CACATTGTTTGCGTGAAAGGGAAAACCCGTGAGATGAAACTTTTATTAAA
AATTGTTGTCGGTAATAAGCCCTCCTCGAAGATGATGTGTAATACATACA
CGTGGCCTCTGTCGAGTAGCAACCCTTTAGAATTAGCAAGTCAATAAAAT
TTAAATCGACATTAACAAATAATTAAGAGAAGAAGCAAAAAAACAGATCT
TGAATATAATCGGAAATGAATTGATTCTAAAGCTTTGTTTGACGATATAA
AGACAAAACATTTACCCACTTACCGTCCCGTTTGAACGTCTCACTTAGCG
TCCAACTTGAGCGTCCTACTTGAGGGTCCCACTACCGTCCCATTTGAGCG
TCCCACTTATCCAGTATGCCCATTTTCGCATCAGAATCACAAAGTGCTCA
AGAAAGTTCGTAAAAATTGGAGCGAAATATTAAGAAGTAAAGAACTAACT
TACAATTGCTACACGATGTTTCATGCTGGTGCAATCATGAAACACTGTGT
AGCAATTGTAAGTTAGTTCTTTATGCCTTGATATTTTGAAAATAGGTTAT
TCAAGAACTACTGAACCAGGTTTAAAAGTTAACAGCTCAAAATTTAAGTT
AGAGCTTATTCTTCCTTATGTTTATGACATTCAATTCGAGTTCATATCTT
GATCCATTCTGTGTTACCAAACATCTTAAGTTTTTTTGGATCACCCGGTA
CTTTCTCAATTATTCTCAACTTAAGTCGAGCTAGCTGTTAGAACCTGAGA
TTGTCTATCTGTTCGTCTGTATTTATGTGCCAATACTTTGGCCAGCTTTA
GTTTTGGCTTTCAAAGATGTTTTTTTAGATTTACTTTTTCTTTATTTTAG
GATTCAGGAATTAAAATCGAGAAGACATCATTAGAGTCTCTACAGGACTT
TAAAGAAATAGCAAAGAATCCTTATGATTTTGTTATTTTGAAAATCAGAC
CAATTGCTGATGCACCACCACCAAAAGGCAATCGCTCACCCCCAGAAGAA
GTTGCTATCATTAAAAGCGTCATGAAAGGAGAAAGTGCTAAAGAATATGA
AGGACAACACGGTGATATACCTGCCATTTATTACGCTGTTCATCAATACT
TTAAAGAAAGCCAAGATGATTGTGCAATAGCAGTTTTCTACATTGAATAT
CCACTCCCTAGTGGCGCCACTAAATCTAAGTTAATTGCTATCAACTGGTA
AGATCTGTTCAAAATTATGAAGCCTGCTGATTATTTATTTTAAATTATAT
CTTAGTAGGTTTAATAATCTTCTCATTGAGTACTTTTTTAAAGTCTGATG
TTCATCAGCTGTCTCCATAATTTGGAAAGTCGCTAGCCGGGGGAATTCTA
AGGTGTACAAAGTGAGAAAAACGAAATTGTTTTGATTTTTGGAAAATCTA
GCCGATTTTTATTTTAGAATGGATAAATAAATGGATAAACCTTTATGGCT
TGGGGACAAGAGAAATTTTTTCGCGTTGGTGCAATGCAACATGCTCCATC
CCACCACACAAGAACAATGTGCGTGTCCCATGGTTTCTTTTTTACGCTGA
TTTCGTCCCTGGGACAAAAGTGAGAGAAACACAAATTGTATTAAAAGTGT
TCTCGATTTCAGTTTTATTGGTAGAAAAAAAATGGGATGGAGACACGAGA
AAACGTTTCAGGTTGAAGGGATGGGGCAAGTTGCATTGCACCAACGCAAA
AAACCTTCTCGTATCCCCAAACCTTTAGAACATGCACCTGTATGCACCGC
AAGGGTCGATTTTTTGTTAAATTAGTTTAACTTTTCTTTGCACTGTTTTA
AAGGCCTACATTAGTAATTTTAAGCCGCACATGAGCAGCACCCCGGGTCG
ACAGTGCTGTTTAGTTTTAGTATCACATGCGCTTTTGAATTATCCTATAA
CGGGCCTATAACAAGACTACCTTTTATTTCTAGGTGTCCAGACACAGCCA
AGATGCAATTGAAAATGCGATACTCTTCTACTTTCAAAACTGTTTGTAAT
AAAGCACCCAAACTCAACGCAAAAGTTGAGGCTCACGACATGGACGATAT
ATCATACAAAGCTGTTGTCAATCAAGTCAGTAAATGAGGTTTTAATGACG
CTGTTAGTGTATGCGACACATTAAATTATCAGTTCACTTTGCAATAGTTA
TAGAGTCACTTTTTGGTCGGGAAAAAGCAAGGTCTTTTATAGATAATTCT
TGTATACTACAGGGTTCCTAGATTCAACACATCACATAGATTATTTGTTT
TTGTACAAAATAAATTTTTGTTCTAACCAGGTGTAACTTTTTGTAGAAAA
AAAGCATCATAGTTAATTTGATTTCACTTTGCGACTAATTTTTAACTTAT
TGTAAAGAATAATTCCCTTGCCTACTGTAGGATAATGCCCTAATTTCTGT
TTGATTTTAATTTGCTAGATGTTTTCTAGGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072737TCONS_00072737Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072737-proteinTCONS_00072737-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:623365..633046 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1221.43	1180.42	1410.49	1403.78	747.09	560.12	654.32	687.14	502.98	581.09	347.85	323.39	308.27	272.79	425.26	515.11	548.81	568.11	228.49	240.26	493.07	514.6	664.94	577.21	348.45	398.76	410.31	296.29	527.16	460.89