XLOC_044945 (gene) - C. hemisphaerica

Overview
NameXLOC_044945
Unique NameXLOC_044945
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:503210..506774+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044945 ID=XLOC_044945|Name=XLOC_044945|organism=Clytia hemisphaerica|type=gene|length=3565bp|location=Sequence derived from alignment at scaffold_77:503210..506774+ (Clytia hemisphaerica)
ATTTGAATGGAAAACATGTttaaaatagagaaaaaagCATTCATCTTGAT
CCTTCTCTGCGCCGTCTCTTTCATTTTTACCGCTCTTGGTACTGGTGGGA
ACGCATGGGTTCGACAAGAATTGAAAAGACAAGATGGTAGCCAAGTCACG
GTACGTGGCTTATGGAAATATTGTTCAACAACGTGTCTTAGTTATACTGT
TACATCTAGTAAGTTCGagtttgtttttgctttttcgGTGCcgtcgtttt
gcataagattcccTTTCCCGCACTAAGTTTCTCCTCGTATCTCCGAGATT
TTTCCACTATTTTCCCCGGGAAAGCCGGTacgagattggaaagggttttt
ttctgaagatacggaaaatcttgtgtttactcacgAAACAGTCtaacttt
tcttttcaaatatccgtattcaaatatcacttttctagcggaaaagACCA
GAGCTCCGGGTAGTTGAAATACgagcttcggaaagttaggcTATTTCGTA
AGCAAAACGACGGCACGGCCTTTTTATTACTTTCAAATagatattttcat
aaattacatcacgATTAAAATATTGCTATGAGGAATACTTCTATGAGGAT
TTTACGAGAAGTTTACCCTTTTTATAAAGATCAGTGATGGAAGTCAATTT
TTGCATCTggatcatagatttataaagccagaagggctagatatcgtgct
tttgctgaaaagtgtgccgtggctaggtaggaaattctacctaagtcacg
tgacattacaatagaatttcagcgcttgaccaaccaagcttcgcgggttt
tcgaaaacaatagcagcaatattttttgcgatattcacttttttttgctt
ggaagagcttaaagcactccatctagcccctcgggctttataaatctatg
gtctgGATGTGAAGGCATTCTGTTTACATACTTTCAGGTTACTTGATGGC
TTGTCGTGCTTTGACAGTCATTTCATCCATTTGTTCTTTCGTGGCCCTAT
GTTTGTCCGTGGTTGGTCACGCCTCACATATCAAACCGTACTTGCTACCC
GTAGCTACAATGGGATCGGGTACGTAAATACTTAGTATTACAGTCAATGA
GCTTTATATAGATCCATGAGGTAGTTTATCAATCCAGGCCAAGAAAAATC
TTTAGATTGGAGTTTTTTAGAAAGTGGTAGTAATGGTAGTACTCAAtagt
ggtgtaaatgcatcgagagcgctagatctactttcccccTTCATTGCTTC
CTtacgggtaccactttcaaaaaaactccaatcaaaggtGGCGGATTTGC
ATTGTGCAGGGGTTTATGAAGGTCAGCGATTACGGCACGTTCATCGGATT
AATTCTGCGACATATTACGTCATCTTTTAACAAAATATTGGATTTACATC
AAAAGATTTTAGAACAACTTAATTTTACAAAAACATAGATTTTTAGCATC
GCCTTTATGCTAAAAGACATTATAAGAGTATTAAACCTTAAACAGTGACT
AAtctgaatatattttttatggctagggacaattcttttgttttcaagtc
agaaaattcagtggtgaTGGAAAACATAGCAAAGTACTTTAAAATGAGGA
TtggtttgtttgattattttcagtggagacaaaaattggaggctAATTTC
CCATCGGGGACGATAATTTgtacaatttttccagtgggaagggttcttct
tgggtctgtgagaaggggatgtccTGCTAAACTTGATTCAATCCTCTTTG
ACCGTCCATAAGTGTTTGGTACCTGAAGGGGCAACTTGTCCTATTTTTGT
ACATTTCTTTTCTTATGAGAGTTAGGGGCAACTCATACtaatacacccct
tctcacagatctgctgggaacccttcccactggaaaaattggccaaaata
tcgtctccggtgggaaattatcctccaatgtttttccccactgaaaatga
tcaaataaacaaatccttcATGCAAAAtaatatgctatttttcccatccc
cactgaactttttgacttgaaacaaaagaatttaaattcaGCCAAAAAGA
TATGTAAATAAAAATGCCCATCTcagtttcagttcgttattttcatcccc
atcaggcgtagtggtatagtggttatcgtgcttgacttctgtccaggagg
cccgagttcgataccGACTGTGGCACTACAATTCAATTGGTAAGTGAATG
CTccttcacccgggtcaacccatgccatatgaggggaattgggtacaaTA
ACTCTGATATAAGAGTATGAGTAGATattccagacattgtggtgtgcttG
TGAGACACTTCTAtctattttcatccccactggatggAAAAATTCTACCG
GGGCTTCTAATCTTTTTGTACattctctttttatttttccatagtTGTGT
CAATGTTCATCGCAATTCTTGTTTACATCAGCAAAAATATCTGGATTTCA
TTTCTTTATACTTCGTATGGTTGGACCTTTATCATTGCTTGGTTAGCTAT
CGTTTTGAACCTTCTAACTGCAATCGTATCTTTAATATTCACTCGACAAC
AAGAATCATAAACGACTTTTACATTTACATACTTCAGTCAATTTTTTTAC
TGGATATATTTGGATCATATTCCTCTACACATCTTATGGTTGGACCTTTA
TCATAGCTTTTGGTTAGCTATCGTTTTGAACCTACTGACAGCAATTGTAT
CTTTGATATTCACTCGACAGCAAGAATCATAAACAACTTTTTCATTTATA
TGCTTCAGACAAtcttttaccaaaaatatttggatttcgTTTCTCTATAC
TTAGTATGGTTGGACATTTATCATTGCTTGGTTGGCTATCGTTTTGAACC
TTCTAACTGCAATCGTATCTTTAATATTCACTCGAAAGCAAAAATAATAA
ACGACTTTTTCATTTATATACTTCAGACAATCTATTACCAAAGATTTTTG
GATTCCATCGTTTTAAATCTACTTACATTTTATAACATTTTATATGCTTC
AGACAATTTATTACAGGAAATATCTGGATTTCGTTTTTCTATACATCTTA
TGGCTGGACATTTATTATTGCTTGGCTAGCTATCGTTTTGAACCTACTGA
CTGCAATTGTATCTTTGATATTTACTCGACAGCAAGAATCGTAAACGACT
TTTACATTTATATACTTCAGACAATTTTcgaccaaaaatttttgaatttc
attccTTTACATATCGTATGATTGGTTCTAAAATCGAGTGGTAATACATT
TTGAAcgttttttctgacttttctgAAATCAAATCGCAAAGCTTGAGCAA
CCAGCTTTTTTAATTCGTGATTTTGCAACACGGAATATAAAAAAGACCAA
GGCGTAAGAATGTTGGATGGTAAACTAAATTTAACCATGCTGTTCTTCTG
AAAATCtttgtatattttatattttctataaATTATTTTCTATAAATTCA
TTTTTGTTAATTATTGAATTAATATAATATTGCCCTCAGTCCTCGCAAgt
tcggtcgttacttgacctcgggcaatatttctcggTGCAGCcatcactaa
ccggtcattattgta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072383TCONS_00072383Clytia hemisphaericatranscript
TCONS_00072384TCONS_00072384Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072383-proteinTCONS_00072383-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:503210..506774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18	0.99	0.28	0.11	0	0	0	0.06	0.12	0.05	0	0.48	7.77	4.71	0.07	0	0.44	0.57	10.81	12.98	2.71	3.19	1.38	1.13	0.48	1.36	0.35	0	0.9	0.61