TCONS_00016415 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016415
Unique NameTCONS_00016415
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5435

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016415 ID=TCONS_00016415|Name=TCONS_00016415|organism=Clytia hemisphaerica|type=transcript|length=5435bp
cgctcataaaatgctgttatctgaaaaatatatgtgtgatttgaagtgcg
atatctcacgaatgaaaagtgcatgaaggttgcctgatacaaNAAGATTT
TCATTTACAACTTTCCAAGATATATTTGAAGATGACTGAACGTATCTCCA
AGGACCGTTTCACATACGACCCTTATACACGTCTCACGTATGGTTACCTT
GAATATTGTTTATGGAAAGAACAAAAAGATGATTGGGAAAGACTGAAGTC
GGGGAATAATGGAGCGAATAGTCAAGGCAACGAGGCTAAGAATTGTTGGT
CAAATTTtgaagacgaagaagaaaaagaagaagttcTAGAGACAGATACG
TCAGATCCAGTCGAACTGGTGTATCACGCGGACCGCGCGCTCAGACATTG
GAACAATATCGTGGAGAACACTGGTACATGGGATTTATTGCTACCCAAAT
ACATGGAGATTTTTTCCTCTTATAACATTGACAAAGAGGTCTGGAAACTA
CTTGAATTGCATGCTGGGAATAATTCGGACAATTATTTGTCGTACGTGTA
TCTGATCCTTTGGAACAACACTACAGGAGCAAATGAAATGGAAGACATGC
TTCACGTCTATGAAAAACTAGCATCCTTAAATCCGTCTAACGCCTTGTTG
CAAAGCTATATGGGTTATTTGAGAAAGTCGAAACATTTTGGTGCATTACT
AGACTTGTTGGTCAGGCGTTTATCATACACGGAGTGCTCTCGAAGTTTTT
TCGATTGGGATCTGCTGGCTTGTTTGCTGCAAGACAATCAACAGTTGGGT
CCACTCTTCCAGGGAAAACTCAGaGCGAAGAGGTATTGGTTTGACTTACA
CTACCAAAATAATCAACTTGCATCGCAAGAAGGGTCCAAAGaacatgaag
aagttgaagccttgaaaatgaaagtagcAAAAATCGCCGACCTATGCACT
TTATTTGCACCACAAGATGATGAAGAAGGAACACTCCCTAACAATCAAAT
AGAACATACAATACAACTACCTTCTTTTAATGACGAGGATGATGAACAGC
TCTCAACCTCTGCTTTGTCAGATACTGACAATGAGGATGAACTGGACTTT
GATGTCGATGATGAGCTCCAGTTTGATTTCTTTCTCCAATCTGATTGTGA
AGAAAACATCGATGTTGAACCTAACAGAGATAATGCAAATTGTGACGCTG
AAAATTACGGAGTTGATCAATCTATAGGAATATCGAATGGTGGAGATAAA
AGAGCTGATGGAATTGAATCTAGTGGAGATAACTCATTGTCTCAAAATAG
GAATGGAACTAGTGTCGAAAGCAATAAAACGATGAAAGTTGTCACTATCC
CAGTTGCATCTATTCCGAAACCCCGATCCCAATCCGAATTGGATGAACTG
ATGAAATCGGAACGTCAACAATATATGGATTTCGCTGAATGGCTAGAAGA
AGAACGGTTGCTACATGCTCAAAGAGACTTGCCTGTAAGTGTTCTTTTGA
ACGGAATTGAATATCGGTGTGAAAAGATTGAAAGGGAAGAATTTTTCACT
CATGTATCAAAAAATGACAATTCTCTTCGTGATCAGGAGGATGGATACGA
TGAGAATCTCCAGTTATTTAAAGACGAAGACTTTGTAACGATCCCAAAAC
CCGATCGGGAATCGGGTTACCATGGACGCAAGTTTATTGAAGAACCATTA
CCCGATTGGGACTTAAAATCAAATAGACACTGCTCGTTACCACAACCCGA
TCTGAACTTTAGCTTCAATGGAGAGGAATCCATCGAAGGCTTAACGTTGC
CTGGTCGGGACACGAATTACCATGATATTGAACCCAGTGACAGGCGCAAA
TCACCCGAACGGATAAATCACTTTAAGAACGATGCAAATTTTGATGAGAC
GACAAAAAGACGCGAGTTTAGCTTGACTGGATCCATAAATGTTAATGAGC
AGTTTCATTTGAGCTTTTCGTCAGACACGGAGGAGAGCAATCATGAAGTC
ATGTTTAAAAGAGAATCGAAAAGTGATGCCGCTCTCCCCAACTCTCTGCT
AAATCTACATGGAGAAGTTGTAGGAACAGATTCGATTGAGAATCTTGCCA
ATCTTGGTTCGAAAACAGTGAGGGAGGAGAGTTACGTAAAACGAAGACGA
CGTCTAGTGTTTGAATCAGATACAGATGAAAGCTCTACGCGGGAGAGTGT
TGTGCAAGACTCTGAAGATGAATGTTTATTCTCACCGTCAACGTTGGAGA
GCGGAAAACGTCATCATTTGCACTCCTTATTTGACAAAGACGAAATTATA
acttcaacacaaaaagacgaAAAACAACCGAAATATGATTTCGAAAATCA
TGATAATAAAACTACGTTTCATCTTATCCATCAGAAGTATGAGACGGGAG
ACCTAGCTCCTTTGCTACCTTTCAATCGCACAGAAAACCGTGAACAAATT
TCAGAGCTACCTACACTTGTACAGGTAAACAAAGGACTGTACCATTGTGA
ACCTTATCACAGAAATGACTTTGTTAAAGCTATCAAGAATCAACAGAGAA
CGAAAACTCGACATAAACTTATTGTACATACTATGAAACCAGATTGGAAA
GCCAGGCGTAGGAAACGCACGCAAATGGCTGAAAACATTATTCAACGCTA
TTTTCGGAATTTGAAAAACGAAATTACGGAACGAAGATCTGGCGAGAGCT
CAAATGAAATTCTACCATATTTAAGTACAGATCTTGAACAGTCTATTGTT
AGTCATACCTCGATAAGTATTGATGTCGAAAACACAGGTCAAAAGTCTTT
GAAAAGGAAGAAGTGTACAAAACCTTTGCGTGGTGATAATAAAGAATCAA
CATGTCTTAAGAAGCGATACTTGCAAGTTAAACGCCGAAACCATACCAGG
CCTATAACGCAAGGCTCAATCTTGTTACGAAGGCAATTGAAAAAGAGACG
AGAGAAATTAGCGATGAGGAAGAAGAAAGAAGAGGAACATAAGACTCAAT
CGATTTGGGAAAGGACTCGAaattcattacgtaatgttaaaAATTTAATG
GAAATTGCTAATGAAATTCGATCGTTTGATAGGCGAAGCACCAAAGAATT
GACATCGTTTCTAGAACTTCAACACCGAGAGGAATTAATTAGAGTGCGTA
AATCGTTTGATGCTCCGAAAGGGTTTTCTTTTCACGATATATCGAAttta
tagtttgttttttttgcgtttttcatcaattttttaacGAATTNTATCGA
ATttatagtttgttttttacgtttttcataaattttttaaCGAATTTCAG
TCGACATAGAGTGGACTTTCATTCATTATTATTCTTCAGGCGAATTCAGT
GAATCCTTGAAGACAGTGAAACTTGGGGAAAACTAGGAAtgggcttttct
agaaaaaaattgaatataaggGTTGGAGGAtacaacattttttggaaatt
taccggacattgtgaattttgacccccccggacaacggatctaaccccct
ggacaagcatcagttgacccccggacattcaaaatcaacCCTAATCAGAG
AATGTTTGCCcctaaaacaaggcaaattttgcagatttttcactacccgg
acaaaatatccaaaatatcCTCCAACGCCATGTACAaagattttctggaa
gagcccaatgaagATTATAAGGAAACTTATACGAGCTAAAGTGATGACGC
TAAAGCTTCAAACTTACACATGCAGTCTTCATAGTACGAGTTTCATTTCA
TTGAAGGTTGAAGTTGAGCGAGTGAACTTGTTTTTTAATGACCAGCAACT
GAAATTCATTCCTTGcgtttttttcagaatttttgagttttgataaattt
gttaaCGTTTTTTagaattatatttatatatggtttattattcttaaatt
ttcaaaatgtttttttttgtatatcAGATTAAAAGGATATAACCACTTGT
AAGTGGGTCATTCAGGTAAAATGAGGTACAGGGATGCGCCACTGTTATGT
GCCAACTGTTCAGGGTCATTTTGTTAATCTCTGAAAATACCGGACAGGAT
GGCAAATTTGTTGAATCTTGAAAGCTCGAAATACTTCTGATAGGGTCCAA
ATTGCATTTGACAGGTTTGATTTTCGCTTAAAATTGACAGGTTTGATGTT
TTGAACTTCAATGGCCGTCAAAACCAGTACCTCCTGAATCCATAGGATTT
AGGATAGGATTTGGTTTGAGTTTGTCAAGCCTATAACAAACACAGACACT
CAGGATAATTTTATTCTCTGATGAACGCTTTTACACCCCCTGTGTCACAg
ctccggtggaactttttcccttggtagggataaaaattcctattgaaacc
CCGATTGGGATATAAATTCTCTTGTTCCAAAATCCAGTTGGGATGGTATT
GGAGTGCAATTCtttaacattgaattttgagtggggatgaaatcaaagtc
agttcccgagtggggctaaaattccagggtattttcccactggggcgaaa
tttttgacaaattttccagtggggctggggtcccattGGGTCTATGACAC
ACGGgtgtacacccctgtgtcacagacccggtggaaatagaccttatcgg
agtttttaattttttcaaaaaagcgatgcattgtgggattgtttcgagtg
tattacaatagaattccctagaggaattcctaagagatttctattgtaat
acactcgaaactatcccacaatgcatcgcttttttagaaaaattaaaaac
tccgataaggtctattgaatcagattgaatttgttttcatccccatttga
aattcaatgaaaaaaaaaacatctccactggattttttgacttttgaaca
ataaaatttctatccatATTGGGATTTTGATAAACATTTTCATCCTCAAC
AAGGGAGAAAGTCCCAcggggtctgtgacacaggggtgttaaatgataaa
atgataaaaattctcATTCTAACTGTGagaagaagttccaccggggtcAC
GAGACTGGAGTGTCATATAGCTTTTTTGTCAAAGGATGCTGTATAGTATA
TAGTGTAATAAGAACAAAACGGGTTTTGCATTTATAACTGAACTTACTAT
AGAGGGATTGATGTTGGCAACCTATTCAGACACAACAGTATTTTCTATGA
AAATGTCAGCGGTTGGTATTTTTAAGAATtagtgttttttgaaaattatt
tttagaatttatcaATAATAATCAGCCAGACGGTAATGTAAATAATTTAA
AACGATATATCTATAGAGAGATTTGCTTGCttgctataatttttgaaaat
gtctttCTTAGAAAAGAATCGTTTTTGAAACGTTGACTCATTTAACTTTG
TACTAATGTTTAGCTTATGTAACCACGGTTATACTTCATTCAAGTCAAGA
GTCTGATTTTGCAATATCTTCTTAACAAGACCTCA
Run BLAST on NCBI

transcript from alignment at sc0000237:190727..201276+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016415 ID=TCONS_00016415|Name=TCONS_00016415|organism=Clytia hemisphaerica|type=transcript|length=10550bp|location=Sequence derived from alignment at sc0000237:190727..201276+ (Clytia hemisphaerica)
cgctcataaaatgctgttatctgaaaaatatatgtgtgatttgaagtgcg atatctcacgaatgaaaagtgcatgaaggttgcctgatacaaNAAGATTT TCATTTACAACTTTCCAAGATATATTTGAAGATGACTGAACGTATCTCCA AGGACCGTTTCACATACGACCCTTATACACGTCTCACGTATGGTTACCTT GAATATTGTTTATGGAAAGAACAAAAAGATGATTGGGAAAGACTGAAGTC GGGGAATAATGGAGCGAATAGTCAAGGCAACGAGGCTAAGAATTGTTGGT CAAATTTtgaagacgaagaagaaaaagaagaagttcTAGAGACAGGTATG GATTGGTTACcgtattacacgaatattactaggcaagtattcaacggcct tgaaatttgaacGATCTGAAATTAGCActaatttttctgctttttcaagg aaacagcggctggttttaattaacgcggtttttattaacacgaaattttt caattcgtgttaataaaatgactagtaatgttcgtgtaataaggtaatta ATTTCATCTATTCATTAGGAAAATTTTTATCATAATGTGTTCATATACTT AAAAGATTCAAACCCCTTTACTGAGTTTTGTAGTTGTGAAAGTCTCCATT GTGCGTGATTCTTGGTACTCTGTatcagagtgtatctcacgtttatcgtt tcgtagtacatgtgcgcattgtctgtttgatgaagaatttcccgtacgga gacctctgcgatgaagtatgatttataaatagcaacacttctcttatCAT CTctcctctctcaccaacactccatcgcagcggtcggttttaaaaatctc aaatgagaaaagacaatgacattTGAGACAACAGACCTTCTACGGCAATG AGTTTTGAAAATAGCTGTAGGTCTGTATACAGATAAGATTCTTGGATGTA TGAGACGTATTCAATCGTATGAAATTGGTAGATTTTTCCGTGCTGTATAG ATTCCTAAAAACTTGTAAATACAGAATGGTGATCTTAAATAGGTTGGTTA CTTTCTTTGCACCTACAGATACGTCAGATCCAGTCGAACTGGTGTATCAC GCGGACCGCGCGCTCAGACATTGGAACAATATCGTGGAGAACACTGGTAC ATGGGATTTATTGCTACCCAAATACATGGAGATTTTTTCCTCTTATAACA TTGACAAAGAGGTCTGGAAACTACTTGAATTGCATGCTGGGAATAATTCG GACAATTATTTGTCGTACGTGTAAGTCAATTACCATTTGTTTGTAATAGT AATGATATGACATTGAGGGAAATTAGGGATTAATACCCcgagtttcattt tgaaatagtttgAAATAGCACGAACGAAGTGAGGGCTATTTCAAACTATT TCACAATGATATGAGGGGTATTAATCCTAATTTCACGAAATGTCATATCA TTCCTGGttaattatatgactgattttattattttttaaagagctATCCG AAATGGGGATTCCAGAAGTGAGACAGAAAATTTATGATGTTTTGCTATAA AAATATGATGTATTGCTTCAAAACACAAATCACTTTCAAATTGTTGCAGA TATTtcataaatataatatcaaacaacaaaaccaataATCCAAAATAATC CATAATACAACAATATTATTGGGAAGAAGATTCTTCCAAATTGTTTTTTC GGCTCCTTTGCAAAGACACCTGCATTATTATCAGCGAGTCAGGTTCATAA TCAGTGTCATTATTCTTTCTTTCGTATCTCCACACAAAATGTTCACAAAT GAAGTGTTCAAATTAGCTATCCTATATGATGGTTCGTATATTCTTTCGGA TATGTCCAATGTTCTCCCGTTCTCCTCAAGCCCACGAAACTCCGCCCATT TCTGAAAAGCATTTATCCAAATGTTCgcgtttttgtttttagaattttgc caTAATAAAAGAACAACATCATCCAATAGCTTGAATTTGTCGTcttcttt gtaaatttttcttgTACTTTTCCTCCTTTGACCAGACAGCTACTCAAAAT ATTTGTATCGAataatgtttactttttttgtgATCGAATGTTGCCAAAaa taatcgaatgttttgaaaattcgaaCGTACGTGGCGCGTGAAATTACGTT AGGAGAAAATggttttgatcaaaaatatttaggCGGGAGCGGGGTATTAC AAATCAAGCGGGGTATTACGAAATAATACCCCGCCGAAGGATAAGGGCAT GCAACCTAAATAAAACCAGTCATATAATTACAAGTTTGAATagagatttt taagaaaattaaaagctttaaactAAAGGAATTGCGACTACAGGCAGCAC AATGATACCTTTCCTCTTGTCAGTTGATGAGAGTTTTGAGtgtaatattt atttattaattttctcaaaatctcatttaaatagaccttttcataagtta cgtcacgaacatcacttgcctcgtattcaaacaattaccatggtgataaT GTCccttaagacatttttttttataaatataaagtagttttaataaaatc cgctgagAGTTAATCACCTGGTAatagtttcaaaacgaggcaagtgatgt tcgtgacgtaatttatgaaaaggtctattgttacATATTTCTAAATTCCT GATTTGCTTTATTTAAATATACTTCCAAATATGGACATTGGAAATGCATC CATTAGCAAGAATAATTCCTTTCTAAAGAACTAGTCCTTTTTTGCAATAG ATATCATTTCCAATATGTTTCGGCCTATACTGTCCTCAAGGACCAAAAAT AGGTGTGAACATTTCCTACTttcgaaaatttcgaaattcctAATATGGCG AAACTGGCTTTTTGGATATCTTCACCTTAATCTCTTGGGTATACTTTGGT TTTCTACGAAGCTGCACATACACTCAAACTAACCCAAGAATTTATAAGCG CTCTCAGGAACGTATCCCTCCCTCACTGAACAAGATTCAAGCTAGACTAG GTACCTCTCTCTCTTTCAGGTATCTGATCCTTTGGAACAACACTACAGGA GCAAATGAAATGGAAGACATGCTTCACGTCTATGAAAAACTAGCATCCTT AAATCCGTCTAACGCCTTGTTGCAAAGCTATATGGGTTATTTGAGAAAGT CGAGTAAGCAAATCTGTttttgaatacacgtttttttataagaacaaact gtataagaacgtaaggcttcgatggccaaaatgttaagaacatttcaagg ctttatggaccctaaaacacccaatttcttaggaaaatggacgaaaatac ccaaaaatggtgaaaaccaaaacatgttaagaacatttaagcttaaaaat aaaaaagttaaaggttttgttttaaataagagtgatatcgtttgcttact catcaattttgattcacCAGCTTTTTAACATCGTACGGATGTGGagtaag attggtcagaaagaggaaaagaaaaacagttttttgcttatatcagcata atataacaaaagggagacactgtcctggtatgaaatatgtgtctgatatg aaacaggaacacttatttaagaataaaacctttaagaataGAAGACTTCA AAGatcttggatgttcttatgaaaaatgtgtAAACATGTTCATGAATATT CTATACAATTAACAATATCTCAACATGCTTTGTCAGgcataaataaaaaa gtataaagcGCCTCCCTTTCTCTCCGCAGAACATTTTGGTGCATTACTAG ACTTGTTGGTCAGGCGTTTATCATACACGGAGTGCTCTCGAAGTTTTTTC GATTGGGATCTGCTGGCTTGTTTGCTGCAAGACAATCAACAGTTGGGTCC ACTCTTCCAGGGAAAACTCAGGTACGTTGACATTCATACCACAATCTCCA CCGACGCTTCTACTAACTTTCAAAGATTCCTCCAACCTTCAAATATTCTT CTAACCTTCAGGGCTCGAAGTagcggtcggacatcggacattgtccgacc caatttGCAACCCCTgtcggacattttgtccgacccagttgaaatcgtta tttcgagccatGAACCTTAACAGATTTTTCCAACTTTGAAAGATTCTTCG AACCTATCACGGACGGAAAAATTTGTATCTCTGCCACCTTAAAAAAGTGG AAAGTAGCATTTCcaagtttggaatttttttcagagACAAATGATAGATA AACAGTTAATATAAAGTTTCTATTGACCGCTAGGTGTATAAGAAATTATC TTCTTCTTATTGTAAATGTGGGATCTAGACTGATCTAGAATCTTCGTCTT CGCAACGAAAACAAAAGTGTCATTTGCCGCCTTTGGAAGCCACATCAATC CTAGTCTCAATCACAGAACTTGACAAAACCGCCGGTAGCATAGACAAAAG AAATTTAGCTTATCAAGCATCCTTTGttaggagcacgaatccgttagtgg gtGTCTGCAGCCTAACGTAACACTGCCATACCAATGTAGTTATTTAACGG TCCAAGTTATCATGCTCAACAAAATCTTTGATACCCAACAGTCCTTACAA CGTACACAGTAAACTTTGAGAATTAGTTAAAATTATAGAAATGCTTGGAT AATAGAGGTTTCAATTAGCAAGAGTCAACTATCATGAAATGGTTCAGTGA TAATACTGTATATCTTAAAGGTATTTGGCAATAAAGTAAATATCCAATAA TAAGAAAGCAAGGCAATTTGCGTTATGAATTGAGCTATGGAAGGTATAAA ATGGTTTTAATCTGTAACGTACGTGTGAACAGGGTCTAAATTGATTCCAt gatttttcattatttcagaGCGAAGAGGTATTGGTTTGACTTACACTACC AAAATAATCAACTTGCATCGCAAGAAGGGTCCAAAGaacatgaagaagtt gaagccttgaaaatgaaagtagcAAAAATCGCCGACCTATGTGAGTTACT ATTCCGAGTAAAATCCACTGAATCCTACACACTTTATAAGAAATATCAGA TTTGTAGCATAGGTTTTGCACTCACTTTGTGGTAAAATTGAGATCCTATT TTTTTGTTCTCCGCTAGATGAGACAGTGACACTATAGTCTCTATTAGGAA GAAATGTGTTTGTTGTTGGTGGTTTTTAGATCTCCCTAACGTCTACCTTA AGAGGacttattttggtattttgcctaactaacttcttgagttcacaaaa aagcttcaaataaggcaaaatagaacagatttacgctgtcatttgccaaa attagttcccgccaaaattaaaaagattaatCAATCGCAaaaagttctcg ccaaaattaaaaattctcaGGATTTTTGCcactcgtcaaaattagttccc gccaaaataagttcccttatgGTATTTTAGAATCTGCaagatttttcttt gaatttaaacttttgaCTCTTTTGAAATTCTGTTCCGGAATTCAAAAAAG TGTCGGAAAgtcatttttatttaattacaAGAGATACTTTCGAGATTGGT AATCTTCCATACNAAATCCACTGAATCcactttataaaaaatatcagatT TGTAGCATAGGTTTTGCACTCACTTGGTGGTAAAATTGAGATCCTATTTT TTTGTTCTCCGCTAGATGAGACAGTGACACTATAGTCTCTATTAGGAAGA AATGTGTTTGTTGTTGGTGGTTTTTTGATCTCCCTAACGTCTACCTTAAG AGGacttattttggtattttgcctaactaacttcttgagttcacaaaaaa gcttcaaataagacaaaatagaacagatttacgctgtcatttgccaaaat tagttcccgccaaaattaaaaagattaatcaatcacaaaaagttctcgcc aaaattaaaaattctcaGGATTTTTGCcactcgtcaaaattagttccctt atgGTATTTTAGAATCTGCaagatttttctttgaatttaaacttttgaCT CTTTTGAAATTCTGTTCCGGAATTCAAAAAAGTGTCGGAAAgtcattttt atttaattacaAGAGATACTTTCGAGATTGGTAATCTTCCATACCCTCTT TTCTCTGTAGGCACTTTATTTGCACCACAAGATGATGAAGAAGGAACACT CCCTAACAATCAAATAGAACATACAATACAACTACCTTCTTTTAATGACG AGGATGATGAACAGCTCTCAACCTCTGCTTTGTCAGATACTGACAATGAG GATGAACTGGACTTTGATGTCGATGATGAGCTCCAGTTTGATTTCTTTCT CCAATCTGATTGTGAAGAAAACATCGATGTTGAACCTAACAGAGATAATG CAAATTGTGACGCTGAAAATTACGGAGTTGATCAATCTATAGGAATATCG AATGGTGGAGATAAAAGAGCTGATGGAATTGAATCTAGTGGAGATAACTC ATTGTCTCAAAATAGGAATGGAACTAGTGTCGAAAGCAATAAAACGATGA AAGTTGTCACTATCCCAGTTGCATCTATTCCGAAACCCCGATCCCAATCC GAATTGGATGAACTGATGAAATCGGAACGTCAACAATATATGGATTTCGC TGAATGGCTAGAAGAAGAACGGTTGCTACATGCTCAAAGAGACTTGCCTG TAAGTGTTCTTTTGAACGGAATTGAATATCGGTGTGAAAAGATTGAAAGG GAAGAATTTTTCACTCATGTATCAAAAAATGACAATTCTCTTCGTGATCA GGAGGATGGATACGATGAGAATCTCCAGTTATTTAAAGACGAAGACTTTG TAACGATCCCAAAACCCGATCGGGAATCGGGTTACCATGGACGCAAGTTT ATTGAAGAACCATTACCCGATTGGGACTTAAAATCAAATAGACACTGCTC GTTACCACAACCCGATCTGAACTTTAGCTTCAATGGAGAGGAATCCATCG AAGGCTTAACGTTGCCTGGTCGGGACACGAATTACCATGATATTGAACCC AGTGACAGGCGCAAATCACCCGAACGGATAAATCACTTTAAGAACGATGC AAATTTTGATGAGACGACAAAAAGACGCGAGTTTAGCTTGACTGGATCCA TAAATGTTAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACACGGAGGAG AGCAATCATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATGCCGCTCT CCCCAACTCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACAGATTCGA TTGAGAATCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGAGAGTTAC GTAAAACGAAGACGACGTCTAGTGTTTGAATCAGATACAGATGAAAGCTC TACGCGGGAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTATTCTCAC CGTCAACGTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTTATTTGAC AAAGACGAAATTATAacttcaacacaaaaagacgaAAAACAACCGAAATA TGATTTCGAAAATCATGATAATAAAACTACGTTTCATCTTATCCATCAGA AGTATGAGACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCGCACAGAA AACCGTGAACAAATTTCAGAGCTACCTACACTTGTACAGGTAAACAAAGG ACTGTACCATTGTGAACCTTATCACAGAAATGACTTTGTTAAAGCTATCA AGAATCAACAGAGAACGAAAACTCGACATAAACTTATTGTACATACTATG AAACCAGATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGGCTGAAAA CATTATTCAACGCTATTTTCGGAATTTGAAAAACGAAATTACGGAACGAA GATCTGGCGAGAGCTCAAATGAAATTCTACCATATTTAAGTACAGATCTT GAACAGTCTATTGTTAGTCATACCTCGATAAGTATTGATGTCGAAAACAC AGGTCAAAAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTGCGTGGTG ATAATAAAGAATCAACATGTCTTAAGAAGCGATACTTGCAAGTTAAACGC CGAAACCATACCAGGCCTATAACGCAAGGCTCAATCTTGTTACGAAGGCA ATTGAAAAAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAAGAAGAGG AACATAAGACTCAATCGATTTGGGAAAGGACTCGAaattcattacgtaat gttaaaAATTTAATGGAAATTGCTAATGAAATTCGATCGTTTGATAGGCG AAGCACCAAAGAATTGACATCGTTTCTAGAACTTCAACACCGAGAGGAAT TAATTAGAGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTCTTTTCAC GATATATCGAAtttatagtttgttttttttgcgtttttcatcaatttttt aacGAATTNTATCGAATttatagtttgttttttacgtttttcataaattt tttaaCGAATTTCAGTCGACATAGAGTGGACTTTCATTCATTATTATTCT TCAGGCGAATTCAGTGAATCCTTGAAGACAGTGAAACTTGGGGAAAACTA GGAAtgggcttttctagaaaaaaattgaatataaggGTTGGAGGAtacaa cattttttggaaatttaccggacattgtgaattttgacccccccggacaa cggatctaaccccctggacaagcatcagttgacccccggacattcaaaat caacCCTAATCAGAGAATGTTTGCCcctaaaacaaggcaaattttgcaga tttttcactacccggacaaaatatccaaaatatcCTCCAACGCCATGTAC AaagattttctggaagagcccaatgaagATTATAAGGAAACTTATACGAG CTAAAGTGATGACGCTAAAGCTTCAAACTTACACATGCAGTCTTCATAGT ACGAGTTTCATTTCATTGAAGGTTGAAGTTGAGCGAGTGAACTTGTTTTT TAATGACCAGCAACTGAAATTCATTCCTTGcgtttttttcagaatttttg agttttgataaatttgttaaCGTTTTTTagaattatatttatatatggtt tattattcttaaattttcaaaatgtttttttttgtatatcAGATTAAAAG GATATAACCACTTGTAAGTGGGTCATTCAGGTAAAATGAGGTACAGGGAT GCGCCACTGTTATGTGCCAACTGTTCAGGGTCATTTTGTTAATCTCTGAA AATACCGGACAGGATGGCAAATTTGTTGAATCTTGAAAGCTCGAAATACT TCTGATAGGGTCCAAATTGCATTTGACAGGTTTGATTTTCGCTTAAAATT GACAGGTTTGATGTTTTGAACTTCAATGGCCGTCAAAACCAGTACCTCCT GAATCCATAGGATTTAGGATAGGATTTGGTTTGAGTTTGTCAAGCCTATA ACAAACACAGACACTCAGGATAATTTTATTCTCTGATGAACGCTTTTACA CCCCCTGTGTCACAgctccggtggaactttttcccttggtagggataaaa attcctattgaaaccCCGATTGGGATATAAATTCTCTTGTTCCAAAATCC AGTTGGGATGGTATTGGAGTGCAATTCtttaacattgaattttgagtggg gatgaaatcaaagtcagttcccgagtggggctaaaattccagggtatttt cccactggggcgaaatttttgacaaattttccagtggggctggggtccca ttGGGTCTATGACACACGGgtgtacacccctgtgtcacagacccggtgga aatagaccttatcggagtttttaattttttcaaaaaagcgatgcattgtg ggattgtttcgagtgtattacaatagaattccctagaggaattcctaaga gatttctattgtaatacactcgaaactatcccacaatgcatcgctttttt agaaaaattaaaaactccgataaggtctattgaatcagattgaatttgtt ttcatccccatttgaaattcaatgaaaaaaaaaacatctccactggattt tttgacttttgaacaataaaatttctatccatATTGGGATTTTGATAAAC ATTTTCATCCTCAACAAGGGAGAAAGTCCCAcggggtctgtgacacaggg gtgttaaatgataaaatgataaaaattctcATTCTAACTGTGagaagaag ttccaccggggtcACGAGACTGGAGTGTCATATAGCTTTTTTGTCAAAGG ATGCTGTATAGTATATAGTGTAATAAGAACAAAACGGGTTTTGCATTTAT AACTGAACTTACTATAGAGGGATTGATGTTGGCAACCTATTCAGACACAA CAGTATTTTCTATGAAAATGTCAGCGGTTGGTATTTTTAAGAATtagtgt tttttgaaaattatttttagaatttatcaATAATAATCAGCCAGACGGTA ATGTAAATAATTTAAAACGATATATCTATAGAGAGATTTGCTTGCttgct ataatttttgaaaatgtctttCTTAGAAAAGAATCGTTTTTGAAACGTTG ACTCATTTAACTTTGTACTAATGTTTAGCTTATGTAACCACGGTTATACT TCATTCAAGTCAAGAGTCTGATTTTGCAATATCTTCTTAACAAGACCTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009168XLOC_009168Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016415-exon-sc0000237-1491911889:190727..191071TCONS_00016415-exon-sc0000237-1491911889:190727..191071Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1510915933:190727..191071TCONS_00016415-exon-sc0000237-1510915933:190727..191071Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1575043694:190727..191071TCONS_00016415-exon-sc0000237-1575043694:190727..191071Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1491911889:191795..191996TCONS_00016415-exon-sc0000237-1491911889:191795..191996Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1510915933:191795..191996TCONS_00016415-exon-sc0000237-1510915933:191795..191996Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1575043694:191795..191996TCONS_00016415-exon-sc0000237-1575043694:191795..191996Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1491911889:193746..193879TCONS_00016415-exon-sc0000237-1491911889:193746..193879Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1510915933:193746..193879TCONS_00016415-exon-sc0000237-1510915933:193746..193879Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1575043694:193746..193879TCONS_00016415-exon-sc0000237-1575043694:193746..193879Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1491911889:194456..194597TCONS_00016415-exon-sc0000237-1491911889:194456..194597Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1510915933:194456..194597TCONS_00016415-exon-sc0000237-1510915933:194456..194597Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1575043694:194456..194597TCONS_00016415-exon-sc0000237-1575043694:194456..194597Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1491911889:195545..195666TCONS_00016415-exon-sc0000237-1491911889:195545..195666Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1510915933:195545..195666TCONS_00016415-exon-sc0000237-1510915933:195545..195666Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1575043694:195545..195666TCONS_00016415-exon-sc0000237-1575043694:195545..195666Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1491911889:196787..201276TCONS_00016415-exon-sc0000237-1491911889:196787..201276Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1510915933:196787..201276TCONS_00016415-exon-sc0000237-1510915933:196787..201276Clytia hemisphaericaexon
TCONS_00016415-exon-sc0000237-1575043694:196787..201276TCONS_00016415-exon-sc0000237-1575043694:196787..201276Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000237supercontigsc0000237:190727..201276 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.04503 3.11639 1.1559 0.181269 7.75475 5.09128 3.94497 5.27631 3.12415 3.44682 1.88597 2.72539 2.2936 2.23063 2.45654 3.04427 3.75043 3.64786 1.45423 1.79741 3.81806 3.56722 3.36826 3.6565 2.59341 3.41888 1.52975 0.212956 2.60182 2.42046
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016415 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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