XLOC_044272 (gene) - C. hemisphaerica

Overview
NameXLOC_044272
Unique NameXLOC_044272
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:70946..79359+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044272 ID=XLOC_044272|Name=XLOC_044272|organism=Clytia hemisphaerica|type=gene|length=8414bp|location=Sequence derived from alignment at scaffold_60:70946..79359+ (Clytia hemisphaerica)
GTTAAGTGCTGGTTCTATCCATCTTAGTTCACTTGTCTGATAAACTTTAA CTGAACTTGCCACACTAATGTCTGATAGTTAAGTGGTAAAATGAGCATCA ACATGGTAATTTTAAAGAGCCTGTTATTATAGTCATTCAGTTTTTGGTAC TGAGGCTTGAAAGTCTCTTACGGTGTTGAAATGTTTCAGTTTTATGTTGT TTTAAAGAATTGTGAAGCCTTCGTTCTTTTGAGAAAAGGTTCTTagatga gcttttaaagtcgaCTGTTTTGTCTGAGATAATCTGTAGCTTGTTACATT CATCTACAGAACTTTCCattgacatttttttgtttatgctTTCTTTTACG TTCGTTGATTGTCAAGTCATGTTGGCCTGAGAGAAATAGAGTAATTTGCA TGatatgttttgttgaaagtgacTTGATTGAGGTGCATAGAAACATGTGA TGTCCAAGGGAAAAGCTTTACTGATTCAATCAATCAACGTTTTTGGCTGA AATCATAACTAGCTACCTCCTTTTCCTATTGTCTTTCTTAAAGTTGTTTA CAGTCCGTGCCGGCCCGGAGAAAATCCCGCTTAacggaaattttgacgtc ataaataaataaatcatagAGAGAGATAGAAAGCGAAACGAGTGAGAGAG TATAATtcatttcttgatttttattgTATGGAATGACGAAGTTNAAAGCG AAACGAGTGAGAGAGTATAATTCATTTCTTGATTTGTATTGTATGGAATG ACGAAgtaaaaaattgatgatgaagttATTTTTATCGCTTCTCTGTtctc aaaaaaaactttgttaATTGCTTTTGAAGAAGATGAAAGAAAAAGCTAGA CGCTGTGGTCATTAGCTCGGTGTGAAGGCCCCTTTTTAATGATCATTTGT AATTATTGTGGCGATTAATGAGTTCCAGTAATAATAATTAGCTTTTGATA AGAACTGGTGTTGTTCACTTTTCAATGGAGCTCAGTCAAGTGTTTACAAG TTGTCATTCTTTACGAAAGAAGATTTTTCTACATCTATaactttatttca ttttacatttttttattcataGAGTCGGTGGTTTATACAGTAACTTTTGG TTGAAAAACACATTAGAAGAAtagataaaatatattacaaaaattatttt ggaaaaCTCGAACATTATAAACAGATAAACAGAAACAAATGTATTGCAAA TTAGACGAGACTGAAATGACACCTAATAATTTCTCCATGAACACCATATT GACGTCAgagaaacaaaaaatggcagacGAACATCACGAAGAATTAAAAC TACAACATCTACAAATGGCACAACAACAAGCGGCACAACATCAACCGCTA ATGAGTTTACAACCACCACAAGGACAAATGGCGCCGCAACacccacaaca acaacaacctaaATATACAACAGACTGCAATGATAATGAGGAGATTCTCC AAGCGCCTCCACCACAGAAGAAACTGAAGAATTATGAAGATGAACTACCC AAGAAAGAAGANCCTCCACCACAAAAGAAACAGAAGAATTATGAAGATGA ACTACCCAAGAAAGAAGAATTATCTTCTGAAGCTAAACATGTCCATGTTC ATCTGGAGGACTCAGAGCTGTGGAAGAAATTCAAATCACTGACCAATGAA ATGATTGTGACTAAAAATGGAAGGTATGAATCAATTACTCATTTTTACGT TTCTTGATAAGCCACCGGGAAACTAGTTTTCGAATCTATGAATCTCCTTG TACTTTGTACGTTTCAGTAATACATATTTCAAACATGCGTTTCAAGGCTt taggaatttcaaaaaaatcagtgTATGTGCAATGGGTTATACCTAAATAC CTCTTAATTTTTACTTAGAAACACTTCGttatcaaaattcaaataacATG TGGTAGCTGTAATCGATGAACTTGGttacgaagaagaaaaaaatcttcaa aatattcTTCCTAGTCCCTTTCCTTTGGTGTCCTATTTCAAGCTTATGTG AAATCTCTTATCTTATCACACGATCAAGCTATCAGTTTTTTAAATCTCAT CATCTTTTTTCACGCTTCTACTCGTCTGACTTAGAATCTTAAAGATTAAG TCTTTTCTCATATGATTTCGAAACATTTTAGGTCTTAGATTTATGCTGTA CGCTCTGCCCCTGTACTACTAGTTTTTTGATTGACAGGTTAGTAAGCGTT AGATTGACGTCAGGCTTAACGAAATCCAAGGTTTCCAAACTTTATTACTA CAACATGCTTGTTAATGAGTAAGGGATTGAATCACCCACGTATTCagatt ttatgttttgaaaCGACTGAGGAATTTTCGGTAGAAGATCTTTTTGAAGG ATTTTTTCGCCGCAGGGTATAAGTTCAATAAAGTACCCAAATTTAATGTA TCATAAGttgggaaaaaatgaaataaaatgaacaaaaaatcaaaaagttc aaTGTTTAATCAATCTAATCCCGTAGAAATGCAAATAAACAAATATGAAT CGAATCTTGCTGTCGGTACTCTTTCATCTTATTACTCTAtcgaaaaaaag ggaaaaggcTTGTAAACGCGCCATATTGAAATTTCTAGTCctctaaaatt ttattaattttttttctcaaaaaaatgtatttgtgTTATTTTTTCAGGCG TATGTTTCCCGTATTGAAATTGAACATTAGAGGTCTGGAACCCAATGCTA TGTATTCCATCTTATTGGACTTCGTTGCTGTTGAAGACCACCGCTGGAAA TACGTTAACGGTGAATGGGTAGCCGGTGGAAAACCCGAACCCGCAACCAC AAGTTCCGTATATATTCACCCGGACTCGCCAAATTTCGGAAATCATTGGA TGAAAAATTCAGTCGCGTTTACCAAAGTTAAACTGACCAATAAAATGAAC GGCGAAGGACAGGTAGATATACTGGCTGTCTTTTCTTGTGAGACTTATTT TGAAATTCGGAAGGATTAGGTAGTTTTTCTTAGAGCTTTTTTGCGATTCG TCGTACAACGGAATAACATTGATGTTATGTGGGTTAAGTTTTTCCTGGTC TCAAGGgagtttgtttgattttttgcgaaaaaattgCCTGCCATCTTTCC TTAAGGCggctttttttaaaagaaaaacaaattacgATCGGTCATCATTC AGTCGGTCTGTtgttagaagaaaaaaatctattttttaggAATGCCTTTA TTCAAtgtaaaaagtgtgaaaatttttcttcCCATTCCTTCTACTTAATA GGTGACCGTTTGCTTtcaataattattaaaaacataaaatagaTCGAATG AAAAAAAGGTCAACGGGcgatttaattacttttttttgactttttgtctt GTNCGAATGAAAAAAAGGTCAACGGGcgatttaattactttttttgactt tttgtcttGTTTTGACAGCGGCAATTCTaatttcttgaaaacttttatCT CAAAGAAacagaaatttaaatttgattgaTTGCATACCAGAAATAGTTTT ATTAAAAGATATTTCTACTCTCAAATTGTTCTATAATAAAAATTCTCCTG AAATTCCGACAGGAAAACACCTTCTAAAGCAACTAATTGGTCACGCTTTC CTTATGTTGTTAGGACCTGGCGAAAATAGAAATGGGAAGGAAGTAAAGTA ACTGAGAAATAGATTCGATCGATACCATTTCCTTCCTGGCGGCTACAAAT TTCATTGCCACGTCACCGTGATTTTAACTTCCTAGTCGCGGCCTTATCTT CTCAATTAGACCAAATTGAATATTTAGACAATTAATTAGACAaatgtttt gtgttttgtttttaggtTATGTTAAATTCTCTACACAAATATCAACCACG AATTCACGTCATCCGAGTCGGTGCACCCGAAGGTGAACGTACGATATCCA CACACACTTTCCCTGAAACGCAATTCATCGCAGTCACCGCCTATCAAAAC GAAGAAGTAAGTTTACGCCCTTCACGCCTCTTTAATGACAGAATAAATCA TTTTCCCATCAAAGTCGGCAGTTTGATAATGCTCtattagaaaaaagccc gccTGTTAACGATACGCCCTCTTCCCGTATCTTTAGTCTATGGTTGCGAT TTTTAACGCCCGCCACCCATCATTGAAAACCACTTAGAGAGGTTTtaaac tttcgttttctaaaaatataatgATGATGAATAGGGTTCAATATAAGCTG CTTATGATGTTTGTAAATAATGATTCGTTTTCGTTATTGATACACACAAA TATGCTATTGTATCTTTATATTATTCAATCGGCTTTGCCAGCGTAGGTCT TTGTAACAGTTGTAACGAAATACCGACACATACAAGTCATCTTGTCAGTA AAATGAAAGCACGAATGTCATTTTTTCCTGATTTAGGAATCAAATCGTTC GGGAATTTCAGCCGTTTCGTGATTTTTATTCATCAATTGAACACGAATAT TATGATATTTCTTTTCGTAAAACTTatttctctttattttttttcgtttt cagaTTACGCACTTGAAAATTCAATACAATCCGTTCGCCAAAGCCTTCCT AGACGCTAAAGAAAGGTAAGAATCAACGATTTAATTCTTCACTCGCATTG CAGGAAATCCTCTCTCTAAATACATTGCGTAAGCTTTATCCAGAGCGCAT CGCGATTGCGCCTTTTTAATGGTCATCGTAATATCAAGGATAGACTTTCG TCTTGCGTTATATGCGATTCATAAGTTATGTTTTtcctgttgtttttttt tgttttttttttacggTGGCCAAAAGCCTGGTCAAGTCATTAACGTTAAA ACATGCGTGTAGAAAAGTAAAGGTATAATGGAGTAGGCCAACAAATACTG TTTTGATAATTAATATGCTTTTATCCCTCGTTAACAACTTCAAAGAGATT CTTAATTGGCTTTACCTTACTTAATGATTTTTATGGTATCANTATCCCTC GTTAACAACTTCAAAGAGATCCTTAATTGGCTTTACCTTacttaatgatt tttatgatatCTAAATgcctcttttttattttattaattctGTAAGCGGT TCTTGATTAATCAAAGAACCTTAATTAAAGTGAGTCTTTTTTTGCGTAAT AAGTTTAACAGACTTTCATGTCACTTTTCATAAAACGTCGGATCGGCAGA ACCATGCAAGCATAAATCTCCCTTCTTTTCTATAGAAGGGTTGTTATTCT GTCTTTTGATGCTTTACGTGGTATCTGATTAGACAAAGAACGCCGATTTG TATTGTTTTCCAATATACAATATTGAcgaaaaaagctttgaaagaaACTA AGGATGACTTTTCTATTGTCTCTTAATTGATAAATCgaagaggaaaaaga aaagacaatGTAACTAGGTCTTTAATGAAAAACATCCAATCTAATTATCC TTTTTTTGAAAGTTATGATGTCATCTGAAGATTTTACCGACAACATGTTT TTCAATTCTCAGTAATTCTTCTGAAATTTTTAAATGCGaagttgactttt tttaaagcaTAGTGGACATTGAGGGGGGAAGCAAATTgttctacttttga aaattgCAATTGAAGATATCAAGGTTCTTCTTTCATTCTTCTTTGAACTT GCCTCTATCGCTTTGATCTTGCCGACCGATCGCTACTTTTCCCCCatctt tctttttgatttccttatTAAAATAAAGATATGTtcatatatattttcat atttgttTAAGACCCTATTTTTCCCTCTCCtttcaagtttcaaaagtttt catcGATACAAGTGCTTTAGTTTCTATTGGTAACTATGTTGGGCTCCTTC AATTCTCTTTCAACTTTGCGAAATTTGTTATGTTCCCAGAAAGTTGTAAC CTGTTGTGAAATTATACGTTAATATAATCCCtttcaatttttgtagattg ttttatttgattatttgcTACCCTTTCATTTGATTAATCTTCGACACTGA TACTCCAGTTTGTCTAGCGGTATTTTGTTCCCCTTataaattttctcttt tcttcgTATTTTTATCCAaggaaaaataatatttgttcGTCCGGAATTTA ATCCGGTCATACTTTAATGACGTCATAGACATACACGACGTCCGCAATGC GGTTCAGATTCAAGGAAAAATTTCCTTTTCGAAAAGTTTTGtatacaaag taaacaaaccgGCATTTTGTGTCCATCTCCTGATACCTTTACTTCTCTTA CAcgtattttgaataaaaatccGGGCGCCTTAGGCCTAGTACTTCAACAA AGCAAATACTTACGCCTCGATTGAATTATGAAATCTTCCCTATCCTAGCT TTCAATGGTACGATTACCTAACGGTTCCAGTTTTTCTTGGCATTAACAAG ACATTTAATGTGGCAAACTTCAACCCTCAGCAATAACTATAATTTGAGTA GAAAACTTATGTTTTTCTTGCGTAAAGATTATTAAAGAAAAGCTAACGAA AACCATAAGATTTTTTCTTATATATACTTGACAGAACGAATNAACTATAA TTTGAGTAGAAAACTTATGTTTTCTTGCGTAAAGATTATTAAAGAAAAGC TAACGAAAACCATAAGATTTTTTCTTATATATACTTGACTGAACGAAatt tatatttgatttttctttgacaGATCTGACCAAAAAGACATGCTATATGA ACGTGATGCTCTCAATCAAATCGCTTCAAACTGTAAGTATCCAGGCTTCT ATAATTCAGTTTGTTTGGAATTCAGTCTAAAAATACTTAGGATTGTCACA CTGGGATTGTCTAAATATTGGCTTTCACCTATAGGCCTCCAACATCCGTT CTTACAGCTCACTTCAAAAGGGATGGATATTTTTGTCATTCCAAGCTATA TATAGACAGATCTATTTAAAGGGTTTCCGGTTGTTGTCATAAGACTTATC TGAACTGAAAATATCAAGTTTGCGGAAAAGATTTCCGACCGTTGGACCAT CGAGTCTAGAAAATCACAattgaaagttattttcatattttcatctTTTC TATTTTAAGACGGCTATTATCCATCCATGATGTCTCCAGTAACACGTGGT ATCGGTTGTGATAATTTACGGAACCACCGAGCGTCACCTTACCCATCACC ATACCAACGGCCCGATCTTTTGTCCGGTTGTCAGCCGCCATATTATCGTG AATCAAGCCCACCCTTCATGAGTAATCAATGTATACAAAATAATACGTGG CCATTACATCACTTGAACTATAATTCAGCAATGACGTCAGCGCAATTGAA ACCTGACGACGTCATCAATCAAACGATGTCTGGTACAACGTTTACAGCTT CAACTTTCGGACAATTCCCAACCACGAAAGCAACTGGTGTCGACCCTAAT GCAAACCCTTGGGCACACTCGCTTGCATATTCAACGAACATATAGAACAA ACCTATAGAAGGAAAGTCATTTATTTAAAAGAGGTTTTTTACGTCTTACC AAAAACGAGAACGATGCATCTCGTACCGACATGGCTGGAGCATTCGCTTA TTTGCCATGTCTGGCTGATAATCGACGTAAACATTTCAGTCGTCCATGGG GCCTATCTGATGTGCCCTTACAAAAGACTGAAGCGAGCTTTGCTCCACCG GTTTACATCGGTTTGCTACCATTATGGATCCCTTTCTTGGATCCAGACTA CCATGACTTTTAGAAGCGCAATCTATTTTTTATGCACAGTGTGCGCACGC ATATATTTTAATAAAGGAAGAAGAcaaaaaggtttaatatataaatATGA TATATAAAATAGTACgttatttattgtttttatagtAGAAAAATGCTCTA ATTATAATGAACCATTAGAGATTGGCAAAACAAAAAGTGCGGATCCATAT TTTCAAatacaaattattttttcccgcgcttttttgCCCATCTCTTTCTG ACATGCGCAAAGCAAATCAATATATTTGTACAGTTGTTTTTACATGTGTG TAAGTTTGTTTGTAagatgttatatttttttggatGTACCGCCaccttat tattattataatattttttgttgtctttaaaaaagccttgtacatttttt atttagttttttttttttcgtataTATACTATATACAGAGGACTATCGTT TTcatcattattttattttcctagCCTTCCTTACACTACCCTCTCCCCTA CCCTCGAGGCTAGTAGAGCCCTCAAttcaaatcaacaatttttcCTCTCG TCCCCCTTTGCCGAATCATTTCTCCCCCCCccaccgacccccccccctta ccTTAAAAGATAATGATGATGACGATAAATTATaattaatattattatta tgaGTAGTAGTTTAACTTGTGAATAATTTGTACAAAAAACAAAGAGAACA CTTGGTGttgtttatttcaaaataaaatacaaataaacCAAACCGATTTT CTGCTTTCTTCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071217TCONS_00071217Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071217-proteinTCONS_00071217-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:70946..79359 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.44 1.03 0.66 0.51 92.19 62.15 16.54 17.96 6.3 21.6 4.75 4.82 23.6 26.14 2.14 3.65 20.39 21.33 40.02 36.67 11.02 15.04 4.01 5.09 9.45 10.83 2.49 0.58 2.44 3.14