XLOC_043404 (gene) - C. hemisphaerica

Overview
NameXLOC_043404
Unique NameXLOC_043404
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_506:82580..89396-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043404 ID=XLOC_043404|Name=XLOC_043404|organism=Clytia hemisphaerica|type=gene|length=6817bp|location=Sequence derived from alignment at scaffold_506:82580..89396- (Clytia hemisphaerica)
CGAAGGAGAGCTTTTTCGTGACTGGAGATTTTGAAAAATTTAATGAATAT AAAATCGATTTATTAATAGAAACAATTTTTTTTCTCGTAAAATTAAATTA ATTTTAAAAGGAGACGAATATTTTCATAAAGTTATACCTCTTTTATTATA TTTTTGTCAAAGAACTGAATACTTTGCTGGAGAAAGAAGTATCTTTCTCG GGCAATATGGAAATTAGAATTTTCATTTTGTGGATGTGAAAATTCTTTTT TGATTCCACTTCTTTGTAAATTCAATATTTTCTTGGGCTTTCTGATAGCG ATGCAGGGATGTTTTCTTGTCTTGGTTTTGTTGGTCAAATTACAACTTAG CCAGGTAAAAATTTCTTTAAATACCCATAGCAAAATTAGCCTGAAATCAC TCTATGGCGGTAAACAGAGATTCATTTGACTCTGCTGATTTCAACTTTTA TTATTCCAATTTTCTTACAATTCAAAGTAAGTCTCTGTCAAAGTAGAAAA CCTCATTACATTATAGCTATAACTGGATTCAAAAATGAAAATAGCGAGAA TAAACTATGCGAGAATAAACTACGCATATACATTTATTTAACTAATATTT GAGACTTCCTCCCTTCTCCGTAGACTGAATATGTTGTTAATATATTTCTG GGTATTTTAGCGTTTTACAGAATTTAAAGTTTGAGTGAAAAATTTCAGGC TTTCTACTTTATCTATTCGGACATCTCGATTTGGGAGTGGTAAAACGGCT TTCAGGCTATATTCTCAGCCATATGTCTTAAGTCTCAGGTCAAAACTCTA CTTTCCAATCCTTAAGGCACTTAGAAATTACTTGCGGTCTTTGAAAATTT GCAGGGAAACTCTTTTTGTGACGAATATTATGACCATAATTGTACCACAC TCACTGAAATTCCGTTTTTTCTTCTTTAGGATTTCATTTCCTGCAGTGTT GAATGTCATGATGATGAAAGAGATATCTTGTACTCGTAAGTTGAAAGTTT GCCTAAAATGACGTCCATTTAATACCGTTTTATGAACGTTAAAATTACTC TACACGCCAGCTTTGAAAAACATATCTCTTCTATCCATTCACGCTAAGAA TTCTAAGGACTACCTTTGAAAATATATACCTTGATTAATCGATTTTGCGA ACTCTAAAAGCCATTGTTTGCCTCATTTTGAAAAGCATGATACGGTTATA TTAATGGGAGTATTTCCTAGCAAGGGTATTCTATCTCTCAAAAATCTTAT AAGAATACAGTAGCATGATCAGTTCACAGAAATCAAAGCCTACTTGGGAA GTTTTTCTGCAAAGAAGATGAATCAGTATGTTTTCTCGTTTTGGATAAAA ACTGAGATGTTAAAAATCAAAGGGTGACCAGAGGCGCCTCTTGTTATTTG GTGCCCCACGAAATATTGGTCGCAACTTGGGGGAGAACAGTTGGCCCCTG TGACGTCACTAGTAGAAAAGGTTTTTTGAGCAACGCACAGACCTCCAGTT AGCTTGGAAAATATTATTGATTTTATAGATGTAAAGATCATCAATTTTGT TGTAATGGATATTGTTGTGATGAATTGTATGCTGTTTGGTATATCTGGTA AGAAATATTTTCAAAGTATTTATCACAACACTCCTGTCTGACAGCCCCGT TGGATGGGGATAAAATTTCCTATTGAGATCCCAATAGGGAGGTTAAAAAA CGCAATGGGTTTGGAGTGCAATCTTTAAACATTGAATTTATATGGGGATG ATGAAATGAAATTCAATTTCCCAGTACCCTTACGGAAACTAAATGCTCGT ATTCCATTGAAAACGAATATAGAATGCATTAAAATAGAATAAAATTCTAG GTTCAAAACTTTGATGAATTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAGTTCTGTCTT TTTGAGAGCACGACCAGTGCACGAGTTTTAAAAAAATCAAATACAGCTTT TTGTGCACAATGCAGGGCGGGTCGGGAAATCATTTAAAAATTTGAAATTT TAGTGACCCAGCCGCCCTCACCATTAATAACGAAACTTTTTTTCTCTGAA CCAGATAAACTTTCGATAATTTTTTTATCAGACAAAAAGTGAATATTTGT CTAACAACAAATACTTTGAATATTCGAAAAAACTTGGAAAAACGAGCGCG TAGCAGCCATTTTAGAAGCTCTACGCGCAAGATAACAGAATATGTTAGCT TTTAGTTGCAAGTTGCGCATGATCCTGAAGTAGGATGAATTCTTCCGCAA ATTATGAACAAAAGTTTTTGATGTTATTATTATCACATATCATAGTATTT CACAATAATGGCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTCACAATAATGGCGCAACTTTTTTTCTGATTC TAATCATAAGTTTTTTGTCTGACAAAAAAAATGAAAATCTAGGGTCTAAT TTTCTGTCTTACTTGTAAAAATGAGACTAGCACAGTATTTCCATGGATTT GTAAGTTGAGTTAGTTCACAATAATAAGGACAGAAATTTTGTTTTTATCA GAAAGAAAATATCGTTTTTGATGTTTGATTTATTCTTCAATGCAGAAAAA AGTTAATCAAAATTGTAAAAATTTGTGACAATTTTTTTACGTTCAAAATT CTTAGATACGTTTAAAATACATTTATTTTTTTCGAATAATTTGGGTAAAT TGCTCTGCTCCATTGATAATTGTAGCAAATTAGTTAGCTAAATTGTTTTG TGTATTGGCGGTTTAGTTTGATAAAATTACGAGCAATTAGAACACAAAAG ATTTGAGAAAATTGATGTTTAAAAGTTTTTTAAAATTTTAACAAGCCAAG TTGTCAGTTGTGTCAGTCACATGTCCGTCAGGCCATGAACTATGTTTAGA AATGATGTTAAGGAAGAGTCTCTTCTTGGCTTAAATTTAACAAATCCAAT GTTATTTCCAAAATTTATCTATTAATATTTATTTTCTTTCTAACTTTCAG GTAAAACCATAATATACCGACGGAATACTGACACACAATTGAAGGATGAT TAAAATCACGATACCAAACAAAAAACGAAGACGCCAACTCATTTTTCAGT TTTTTAATTTTTAATCTTTTATTAGAATTTTCTTTGTAAATTTCAACTTT AACTTCTGTTTATTCTACTAAATAAACAATTCCATTTGCAACTCAAACGA TTAGACTTGTATCCTGTATCTCAAAACGCAGTTAATCTGAGTGAATATTA GCCAATAACCCATCGAATACAGCTCAACAATGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAGTGGTAT TCTTACAAAGAAAAGAAAAATAATGCATTACAAATTCTCAATTCTTATGA AAAATCTTTCCTATAAGAAATATTTCGGATATTGAAAAGGCATTTCAAAT TTGGATTTTCAATTCATTTGAAATCTTGTCCGCTATTTAAAGTGCATTTT AATTTTGACGCCGTTCATTAAAAATATATTTATAATTTTCCTCAATTCTC TTTTTCATGTTAAAAATGTATTTGTAATTGTGAAGTATCAAAAAATTATA AAATTGTTCAAAAAAGTAAATGCATTTTNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNAGGTTTCACTACATTTAAATTGCAATTAAACTCAAATT TCAATGAAAAATTCGATGCATTTAAAACGCGTGGAAGTTCCGTAAGGGTA GAGCTGAAATTTCATGGTATTTTCCCACCGGGGACGAAAGTCTTGCAAAA TTTTGCAATGGGGCTGGCGTCCTAGCGGGTCTGTGACACAGGGGTGTATC ACAATAAAGTGCATAGAAAGATTGATGAATATTATAGACTTATGTTTCCG CGGCTTTCTTATACTATGGTTTCAGGGAGAGGGCTAGAAGCTATTATCAA GTTAGAAACCTCAGGGCAATATTGAGTCCGTCCTTTTTTCCCTCAATAAC TTTTCAGCGTATCAGTTTTTAAACGATCCCAAGTGGCCAACAATGATTTA TGGGTCATTTTTGCAAATACAGATGGGAAATTACTTTAAAAGTACCAATG ACCTAAATTCATGATTTCTTCCTTTTTAGGGTGTTATTTTTTGGATTAAT ACTATTGTGTTGTGTTGCTGCTGTCATTATACGTAAGAAAAAAGCGCGTA AGAATAGGGTGACACATAGCATGTTTTTGGAACGGATACGGGAGCGCATC GAGCGCCAAATGTTGGAGGAATCAAATGTTTCTTCTGTTAATAATACGAG TGGAAATTTCTTAGATGAACCACATATGATGTTCAATTCATCCAATCAGA GTGTTGGGATTGGAGGCATGGGGCGAACCGATGGTATGATAACACCAGTT GGGCGGTCGCCCGCCAACCTATTCTTAGCTAGGGCACCACCGCCATATAG ATCAACACTTGAACTAGATAACCCACATGGATCTAGGGATGAGGCACCGC CTAGTTATGATTCCATTTTCGCAAACGAGAACTCGCAAAATAATAATCAA ATTGCCTCAAGTAATGGAAATAATAATAATCAGACTAATGAAAATTAAGA TGATAAATTTTCTGGATTATTATTAAATCGTACGGAAGCAAAAATTTGGC TCAATAAATTATTTTATTGTGTCGCTTTTGATGGATTCAGAAAAAAATAT ATAGGGTATGGTATAGTTTTTGGGCTTTGCTTGTGGACATTTTTCTATTA NCAAATACCAGGATATGGTATAGTTTTTGGGCTTTGCTTGTGGACATTTT TCTACTATTTTGATACTAAATTTGTCAAAATCATGTTTAAAATTTTATTG TGATTATCAAAAAATATAACTTTTAACTATAAAAATAATTATAATCTATT ATATAGCTAGCGATAGCTAAAGTTAATTATTACGTTAGATTTGACATCAA TTGGAATTTTCTCACCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069703TCONS_00069703Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069703-proteinTCONS_00069703-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:82580..89396 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.07 0 0 0.04 0 1.05 0.95 0.38 1.17 16.74 14.19 3 1.69 2.9 2.79 53.24 40.39 15.97 12.83 6.69 12.6 7.18 16.9 2.74 0.45 0.04 0.08