XLOC_042995 (gene) - C. hemisphaerica

Overview


Name	XLOC_042995
Unique Name	XLOC_042995
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_491:392288..401726-

gene from alignment at scaffold_491:392288..401726-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_042995 ID=XLOC_042995|Name=XLOC_042995|organism=Clytia hemisphaerica|type=gene|length=9439bp|location=Sequence derived from alignment at scaffold_491:392288..401726- (Clytia hemisphaerica)
AGGATGACCCAGAAACGATGTTGAAATGTATGACAGTTGCGTCTTCGATG
CTCTACCATGTCAGGAAATCTGCTCATTTGGCTAAGTCATCAACTCTCCT
AACCTTGAAAGACGAGTTGGTGAGTAGGCAACAAGAATCATATGGTTTCA
GCCTTTTTTGATCAAATCCATGTTCAAAAGATTGAAAAATAAGTTTTTTC
GCCATTCATTTAAGTCTTGCACCCACTTTAGAGTTCAGATATTAAACTTT
TATCTGCGTCATATTTTGGTTTTGTGTCACCAATATTTCAGAATAAAATG
AAAGAAAACTTCCATTTAGCATGAATATTTTCAGATGCTTGTTCATACTA
AAACGAACTTCTATTCTTCTTTTTTTAGATTTTCGAAGGTATAAAGAATG
AAGATCCATTCATTCGTAATGAAGCCATCAAATGTCTTGGTCATATTTCG
TTGATCAGCAAAGATTTTGCTGCACAACACCTTGTTCTCTTCCTTCAGGT
TTGTCGTACTTATTTCTATGGTGATGATTATGCTGGAGAATTTGACAGTT
CACTTTCCACTTATCTACCATCGCCACAATGACACCATAATAGACCTTAT
CGGAGTTTTTTATTTTTCTAAAAAAGCGATGCATTGTGAGATTGTTTCGA
GTGTATTACAATAGAAATCTCTTAGGAATTCCTCGAGGGAATTACATTGT
GTGTTCGGGCCCTTGAAAACCTTGTAAATGAAAACTTTCCAACCTTGAGC
GATAAAGGATTTTCTTCGAAAAACCTTGAAAATTCATTGAGCATCACTTT
CTTAGCTCATGTTTATCAGTTTTTGGCTCTTGGGTTTTTTCTGCAGTTAT
CTTAAAAAAATCTTTTGGGTTTTTCTCGCTCGTAAATTAAAGGGAACTGA
AAAATTATCTAATTAAAAGTCTCAATCATTATTATGATAAAATTTGAGTG
TNACTGAAAAATTATCTAATTAAAAATCTCAATCATTATTATGATAAAAT
TTGAGTATTTTTAAGCCTTGAAAAAGACACGGTTAATAAACCTCGAAAAT
CTCCCAAAATATAGTCAGAGAAACCTTGACAACCTTAAAAAGCTCTTTGA
TTAGAAAATCTTGTAAAGGACACAGCCAAATACCTTGATAATCTACTCTA
AAAACTTTTAAAAATGGCTAAGCTCTTCAAAAACACTTCTCATTATGATT
GTTAGGTTGCTCAAGTGGATCAAGAATTATTACAAATCACATCTGTCAAC
ACGATATTTGATTTGTTCCTCATGTATGGTCTAGAAGGAAGGTATTATCT
TTTCTCAATGCAGTACAAAATTTTCACGATCTTCGCTTCATAGGATGCTT
TCAAANCTTTCAATACCGAACAGCCCAACAGCAAGAAGAATGAAGGTATT
ATCTTTTCTCAATGCAGTACAAAATTTTCACGATCTTCGCTTCATGAAGA
AACAAAGGATGCTTTCAAATGTGGTAACTCAGAAGCAGTCCTGTGTTGAT
TATTTTCATCTCTCTTTATCATGCCTCAATACCGCGGACATATGGTTATG
CTAATCATAACTTGGACGCTATAAGGATAAGCGTTTATTACCAAGGATTG
GATGATACAAAACACTTATATCTAAGCACGTCAATGCCTTTGGTATTTAA
GGACTTCAATAAGGTCATATGGAATGTTTGGCTTGAAGCACGAAAGAAAC
ACTGTAAAGTGTAAATCTTGGATCACGTCTATTGTGTCTATGTTAATGAA
ATCGTTTGGATAGGTTTTGATCCTAATAAACTTACTCCTACCAAGCATGT
TATACAATCATTGATTGTTTCATAAATTATGTCATGAGCAAAGCCTAACT
CGTTTCCAAAATATTACTTTGTTAGTTTATTCCCAGAGTCGAGTTCATAA
TAAGTTTACTCTATCATTTAAAATTAACACTTGTAATGTTTTCAAAACAA
GGCAGTCGTTGCGCTCAAAGTAATTTATGAAAATGCCTATTGGTCGTCTT
TTTTTAAGAATCAAACAATGAAGAAGACACTACAATGGTTTCACAAGAAG
AACAAGAAGAAACGGAAGGGAACAAAACAAATATTGAAGAAGAAGGTGGT
GAAAATGAAGAGCCAACAATTATTGAAGAAACACCACCTGAAGAACAGAA
AAGTAATGCTGGCAATGCTGCAGAAAGTGTACTCGAAATTATGGTCATGT
TTCTTGAAGGGGAGGTAAGATTGGGTCAAAGACCGTAGAACAACTTTATT
GCGTAGACGAGAGGCACGAAATTTTGTGTAGGAGACCGGATCTTAATGAC
ACAGTAATTATCTATTTATATTATGAATAGATAATTACTATGTCATAAAA
AGCTGCTCTCCTATACAAATGGAAAATATAGTTCTGTCATGTTATATAGC
GCGATTAATTTCTTTTCTCCAAACTTTTGCCCAAAAAATCGTTTTTTTGT
CGAAATAAGGGACTATTTTTCTCAATTGATCGATCCCAGCCTCAGAGAAT
AGAAGTTTTTTAAATTTTTATTCATTGCTGTTATTGTAACAATTTGATGT
TTTACGGTATTCCTTTGTAGAGTCCAGATTTACGTACATCAGTCGCAGAA
GGGATGGCTAAATTACTGATCTCTGGACGAATCGTGAGCGCAAAGATTTT
GACGCGTTTGATCTTGTTATGGTATAATCCAATCACAGAGGACGACATCA
AATTACGTCATTGTATTGGCGTGTTTCTTCCACTCTTCTCCTTTGAGAAT
AGGTAAACTGATTGTTATTTTTAATTGTTATTTATAAGTCGGTCAACGTA
TCACCGAAATAAGTTCTTTAAAAGAAAGAACTCTTTGAAATAAGGATCGG
TTTTTTCACATTTCAAAGGGTCGGAAAATTCACAATTTTTAGGAAGTTTT
TTGGTTACCTCGAAGGGTAGGATTTTTTTTAGAATGGAAGAACATTTTTC
AAAAGAGTCTCTAAGAGTCGGTTTCGTAGGTCCCGTCCGGACCCCTCATC
CGCCAACCCTAGTTACCCCCCGGACTATGATGCAGCAGGAATATTCAAAT
CAATTGCCCAATTCTTCTTTTCTTTTCATTGACTATAGATCACATCAAGA
GATTTACGAAGAGACCTTTTTACCTGTTCTCAAAACTTTATTGAACGCAC
CGACCTCTTCACCATTGAGTCGCGTTGACGTCACGAATGTTGTAGATCTT
TTGATCCAATTGACTGATGTTCGAAATTTGGTACAATTCAACGTGACCAC
CGACACTTCACAGAATAATTTACTCAACTCGCTGGTAAGCTTTTCTTTGT
ACTATTGTTCATGGGACATACAAGATTCTCAATTTCAGTTTAAACGATGG
TGATAATATTTGAGGTCGGCTGTCTGTCTGTCTGTCTGTCTGTCATAACT
TTGGACAACCTGGAGACTGACAAAAAATGGTTGGATTTTAGACTAAAAAA
ACATATCTTGTAACTTTCTATGGGATGTTTGAATTTTTATCGTTCGAAAA
GGCTTTTATACTTTGGAGCCCAGGTAAGAAGAGTTATTCACCAAACAGGC
TAAAAATCTTTATGCAGGCTGAAAGCTCGATATGTGGTCCGTCTATAGTT
GGCCGAAATTTTGAAATTTGTTTCTTAGGTTAATATCTGCGAAGCAATTA
ATTCATTGATTAGAAATTTCAATTTTTTGCTGTCGGTGACGAGTTTGGGC
TTCTCAGCAGATGTTTTTATGTTCCCCTAGCACAATGAATTGCTCCATTA
AATTCCCATACTGGTGGCTGGACGAACTTTTTCAAGTCAAAAAATATTCT
TAAAAATGTGTGGATTCCTTGGAAAAATGGCGAAATTTTTAAGTGACGGT
GGACGAATTAAAATCAGTCCTTACTCCCTGAAAGTTTTAGATTAAAAATT
ACCCACTGGAAAATAAAAAGTACTCCTTTAAAACCCCTGGAAATACTTTC
CAGATTACCCTCTGGAAATGTTCGTCCACCCCATGAATGGATGCAAAATA
AAATGGCCAAACCAATCCAACTTTATTCATCTCAGTTTCTTTGTTTAACA
GGAAACACATGTTCACGATTCACTAGCAATGCGATTAGCCAATGAAATTC
TTTCCGACCCTGAAGATCCAGATGTCAAATTATTTTGCAAAACGCTCACT
CAATTAGCAATCTGTCCAAAGAATGTGGCAACTATTCGCGATCTTATCGA
ATTGTCAAGCCAGATAACAGAGGTAATAATATACTGTTCAAAAAAACTCA
CAGTATCTCTTATCTTTTTAAGGAAACTTTGGCATTTTAACATTTCAGTT
GAGCCTCTTAATTCGAGCCTCTATAACTCGAACAAGTTTTCCCGTCCCTT
CAGGTAGCAACGTTGTTTCAACGTTCATCTAACGTTATATGGACGTTGTG
AACGTTAGATAAACGTTGAAACAACATTGTGTCCCTTCAGATAGCATTGC
AAACCTTACAAACCTGACTCCATGACTCGAAATTTGTGTTTCCCGTGCTT
GTTCGACTTATGGGGACTCCACTGTGTCATTGCTATATCGACATATTCAT
TACTTGGTTGATTGCTATCTTTATTATTTTTCAGGTATTTGAAGGGAATC
GCGTAGCTAAAAAGTCGATCGAAAAATTTCAGAGCACTCTAGAACGCCTT
TTGATAGACGGAGGAGGTAAATCTTTGTTTGCCCCTTATATTAAGCAGTT
TAAACAGATTTTTTTAAGCAATGGAGGCCTACATCATGCCCGTGCAGAAA
CTGCCGGACCTTGACGGTGTCGGCTTTTTGTAACCACCTTACAAATTGTA
TAAGTAATATTTATGTTTGTTACTGACGTTGGATTTTTTTTACAATTGTT
TTGCCGCATTCTAAAGCTCATTTAATACTCATCCCGAAACTGGATGAAAA
ATATCAAAGTGGTCCGCTGACCTAGGCTGATTCTCCTAGTTATTGCCTTT
AGAATGCATACGTGCAATGTATTGCATAGTATCAGAATTTCACTTTCAAC
TTTTGCATAACAGGCAGTATGTCATCAACTGGACAAGAAAGTCAAGATGC
TACCGTTCCACCTGCAGTAGAAGCCAATAGTACACCGATTGCTGATCTCG
ATAGTGGTGCGCGAAATAACACATTGACCGACACTGATGCCGATAAAACT
TTGACGGAGACTGAGAATGGTAAAAGCTTTTCTTTTTTCTTCTATCTATC
CGCGTGTTTGATTCTAATCTCCATTATTTCTTGTTACAGATTTAACGATT
TTTCTCCTATATATATTTTGTATTTAATTAACGTGCAGCAGTGTCTCTTT
TCATCCAAAAATTATATGCAAAGTTTGGGCTATTCATTGTGTTATCAAAA
GTTACATCAATACTGTTAGCTTGAGCCGTTAGTGGAAAAACATCTTTAGG
ACCGTAAATTGTCAAACGTTGATTTTTGTTAGTCAGAAAGCTGCCTTGTG
AACCCCAAAATGCTTGCACGTCTGTTATTCTTCGTTATATCTTCAAGCTA
TCAATTTAGAATTTTTAAGGGTGATTCATTAGACTTAAAACTTCATAAAA
ATCCTACTTTCCTTTCCATTTAGTAATCTAGTGAGTACCTCGTCCGAAAT
TTCTATTCGTCAAAGGCTGAATGCAATTTTATAATTTCGTCATTGTTTTA
GAACTTCCACCCAACAAACATAAGTTATCTTCTTCGAGTGAAAAAATTGC
ATCCAAATCAAAACGATCGAAAATACAAGATTCGCGCGTCAGGTAAAAGA
CTAACACTCCAAGTCTACTAAACCGTGTTAAAAGAGTTTTAATGAATAGC
AAGCTTGAAAGACGTGTGTCATGAACATGTCATTAACCCCCCCCCCTGGT
TAATCCATGATCTTCATGACACACGTCTTTTCATAATTTCTATGGAAACG
ACTTGGATTTGCCAGTGGTTAGATATGTAATCAAACGATTTGGAATATTA
TTGGAACTAATTTTAGCAGGAACTAATATTTGCGGTCGGAAGAAAAAATC
GGAAAAATAGCATTTCGCGGGTTTTAATTTTAATTTTCGCGGTTTTGCCC
TTTTTTGGGCAAATTTCTTTTATTTTCCTAGGGATTTTTCAAATTTTTTG
ATAAAATTGGAAAAAATTGTACTTTGCGGGTTAGAATTGATTACTAAAAA
AATTGAACTTTAAACACTAAAATTAAGAGCCATTTTTTTTAAAAACCTTC
AGAATAAAGAAAGTCTGATACCTAACCCTCTTAGATTTTGATGAAATTTT
GACCAAATGATCTATCACACAAGAAAATAAGACTCTGAAAATTTCACCTT
GATATCTCAAGTAGTTTTGAAGATACANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTC
TTATTTTCTTGTGTGATAGATCATTTGGTCTAAATTTCAGCAAAATCCAA
GAGGGTGAGGTATCACACCCTGAAGACTCTTAAAAAAAATGGCTCTTAAT
TCCCACGAAAATTAGTTCCAATAAGGTAAAGCACATTGATTTGAACGGAA
TGTTGCGTCAATTCTAAAAGTAATGATCTGATACCTAGTCATAGATGTTA
TCTTTCCCTTTATGTGAGTCTGATTTCCCTTGTATAAATTCGAGATGAAC
CTTCTACAAATCACTTTACCGAGATTATTTTCCGTTTTCATTTTCATAGT
TCTGCAAGTGTTGATTTTCGTGTAAATCCAAAAGATTCTACAGTGTAAGT
TTTTTTTATCGAAGTAACGGTTTATAAAATTTTGCATTGTGAACATAAGT
AAACTACAATGTACTTTCGCGGAAACTCTGACGATGTCCATGAATCGAAA
GCAATGCTTTAGCATGTTCAGTTTAATGCAAACATAATTGGCATGTTATA
TTCAAATATACACCTCAGCTATAACTACACAGATAACAAAATAAAAATTA
CCACTTAGCTTCACTTTCTCGTTATATCAACGAAACCCGTGCATTTTAGT
CAGGTCATTATACCCAATGTAATTTGATAATTATATAAAAATTTTTTATA
CATTTTTCATCTTCTTCACCAGATTATTAAATTTTTCTCTATTTGGTAAT
ATTCCACTCTTGAATATCTTTTCAACGTGCATAAAACCGCTAGTTAATTT
TTGTTATTTTTATTGAAATTAAGTTACAGCGTGGCTTATTTCCATGACTC
ATAGGAATTATCATTTCAATGAGCGTCCAATTAAAACAAATATGATACAC
GTTTTTTATAAGAACTTTTAGAGCCCTCAGATGTTCTTAACTCTTTGTTG
TAAGTTGTAAGCCTAAAATTTTTTTTACCTGTTTGTGGGTATTTTTATGT
GATTCCCTAAAATAATGTATGTTTTAGATTTCGCAAAGCCTTAAAATGTT
CTTAACTTGTTCTTAAGATTTTGGCCTGATGTTCTTATATAGTTTGTTCT
TATAAAACAACTTGAAGTATTAATAATGTCTCCCATTTTTTTCTGGTTTT
CAGTGAAGTCGAAGACGAAGATGAAGAAATGGAAAGCGAGGGAGAAGAAG
AGTAATTGCTGTAGTCGTAATTACCAATTAATTTCTCATTTCGTATCTAG
AACTTCTACGTCATTTTTAAGGGAAGTATTTATTATTATATTGCTTTGGT
TTTGCAATCTGTAACATTTACCCCTTGAGTTCTGGTCAAAAATCTGCTGC
ATTGTCAATATAGAAGATTCTTGTATTGCTGTGGTTGTATCGAATCCCAA
TGTATTGTTAAGTGTTTTGTCAATTTTTACCTTCGTCCTTGTATATAGAT
TTCTTTGAATATTATAATATTGATAAATATATAATCAGATGAATTAATTT
AGAAAAAAGTGCTTTCGGCGAAACTGTTTTAGCTTTATT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00069005	TCONS_00069005	Clytia hemisphaerica	transcript
TCONS_00069004	TCONS_00069004	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00069005-protein	TCONS_00069005-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_491	supercontig	scaffold_491:392288..401726 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.62	23.52	10.27	9.66	32.54	28.36	24.88	31.03	22.33	24.69	18.03	16.78	12.36	12.85	18.45	18.15	26.49	23.78	8.97	8.73	10.62	11.17	18.81	15.85	29.74	32.52	7.9	5.63	12.89	13.04

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XLOC_042995 (gene) - C. hemisphaerica