XLOC_040390 (gene) - C. hemisphaerica

Overview
NameXLOC_040390
Unique NameXLOC_040390
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_414:31703..37805+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040390 ID=XLOC_040390|Name=XLOC_040390|organism=Clytia hemisphaerica|type=gene|length=6103bp|location=Sequence derived from alignment at scaffold_414:31703..37805+ (Clytia hemisphaerica)
GTAATGGGTGACGTCAATGCTGTCCTGGCTCAAATGAGATCTTTCACACA GGTAAATATTCCTGCTccataaatttttatcatagaAATGACACATAGAG ACAGGGACctctgacctttatatacccttgaccaagctatatctgccatc tttgatctgGATGCGGGTTAATTtataattcaatgaaattttcctttatt ttttttcccACATTTAGTAGTGCTACCATCAGGGTACCACTtgcaaaaaa ctccgatcaaagattttggttggcCGGGATCGAAAAACAGTGTCCGGGGT ATATAAAAGTCAGCGACaaggacccattttcaaagaTCTCAAACATTCCA ACATTTTGGGTATTGGACACTTGAGTGTGTGACAGCAGAAAATCTTCAAA CCAACTGATCATCCTTTTTATCTTCGTACattattatctccctaatattt TAGGATGTGAGAAGTGGAACATGGAAAGGATATAGCGGAGAAGTGATCAC AGACATTGTCAATATAGGGATTGGTGGCTCAGATCTGGTAcagcttttac tttttttgtcttATTAATAAGCGTTTCTAAGCGTTTCTAAGCTTCAAGGG AAGAAATTTGTCTTTAATCATTTTTGTAGGTCTTCCTATAAAACTTCTTG TGAGATTAGAGCACTCCCACTTTCAAGGATGTAGAGTAaatggagaaatc cagggagaaaaagtgacgccctcccctacctttactttaggtagatagct atcgaaagagaagCCTTCGGGTCGATCCGGACTGCGgccgcagacttact tacttactttgtGTTTTAGGGACCACTGATGGTGACTGAAGCTTTGAAAC CTTTCGTGGACGGCCCTAAAGCTCACTTTGTCTCAAACATCGATGGTACC CACATGGCAGAAACGCTAAAGAAATTGAAACCAGAAAGCACTTTGTTTAT TGTGGCTTCAAAGGTTTGTGGTGTCAtgtagtttttggacctacctcgga ggtgctttaaattaaccttcgttcgttcgttcgttcgttcgttcgttcgt tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc gttcgttcgttagttttttctgatttttggcacaaaggtgcaaaataatg atgcccaaaatgtgacggagcccgattttcgagaaaaaaaaattccggcA GAAATATGACTGAAAAACctgaactttctatttctatttttccttccctc acccccatcaacaatcaatgatgaaatttaatgtgttgtgcatttttgct aaaccctatattttctgactgattgttttcatttttctccttattgttat ctaactttcatcatcaggtaggtccattcagcgtGTAGCTTGTTATATTA TTGGCTATTATAGTGATCCATACAGTAtgccaaaataagaaaaatgagtT AAAATTGCTTGTCGCATGGCCACTTtcagttttatttatttgattctttt cCCTGCAAATTACATGAAATCAAAGCAAAAGCTACgcaaaaatctaattc gaaatcCGTGTATTGTTTAAGGCAGTGCTGTGGGTCTAAATCTTAGTTTT AAAATTCTCACCCtcaggccaaaccatggttggccctcgctgTGCCACTA AACATCATATaatatcaaaatgcttcctacggcactgtgaAGATATCGTT AATAAGACTTCCGATGGCTATATCTTGAGATGTTTTGGTTAGAAATTTGC TGACTGATGCAAAAATGTTCCATAAATGTCAAACGATGAGTTTGAGATGA TAATTTTCGAAATTCTTATCTTTGCATCGTTAAAAAGAAGTGGAGGATAT AAAATGGATAAAGATAATAAAGAAAGTTATAATACAAACACTAATTAAAA TCCCTTTAATAAGTCTCTCATTTTTTGTGTGGAATACTTCTGAAAACAAG ATTCTTGATGAACGCGTCGGCTGCGTTGTGCCAGGGGTCTGAGCCCCACA ATCTGACGTCATGGAAAACACGAGGTGTGTTGTTGATGATGGAGAACCGC CGTATTCTGTTAATCAAGGTAATGTATCGATATCTCTTATAATCGGTCTC GTAGATTTGGGCGATCTGAACGTTAGTGTATTTGTTGAACGGGACATGGT TTGGTGTGTTGAAACAATAATTATGGTTATTGTTGATGGCGTGGCAGATA TGGAGCTTCCGGGTGTTTGGGACGAACCAGATTGATGGAATACAGTAACC AAATGTTCCGTGGCTCCCGCCGATAGTGGAGTGTAAAACGTTGGTCCAGT GGTTCTTGATACTGCCCACGTGTTTGACGTCGAAAGACATATACCATTGC TTCTCAATGCGCGGGATGAATCGAAGGAGCTTGCCTTTCGAAAGTTTGTA ACCACCTGAAACGATGAGAAGAAATGGTTTTTTATATTAAGCGTCAAGGC TTTTTTTGTTTGGAGCCCCTTGCCAAACATTCGATttattgacgtcactt taaactttcaaatatcTTGCAGTAGAGAAAAATCAATTTGCATCAGAACA CTTTAaggcttcttttttttcagaaaataatcaAAGTGTAACTCGAAGAT TTTCTTACCTCCTGAGGTTGTTGTGACTTGAAGTTTACTGATGTCCGCTT GAGCTGGTGAAAACCATGGATCGCCCCGGTAAACTCTAACATTGCGGAAA GTTCTTGGGCTGGTGTTAACAACGTTCAGTTCTACTTTCTTATTAATGGT GACTGTAAAGTAATTGGTGCAGCAGCCGACTACTTTCTGCTTGATATTAA CTTCggtgaatttatttattagtaAATCCTTACTGGTCCAATGATAATTA TTGTTGGCGCCGAGAGATGTTGCAATGAAAAGTTTATTTGAGTTTGGCCG GAACCAGACCCCGGGGATTCGATCGCCATGAGATCCGTGATTCCTGCCTT TGGTGACGTGAAGTATACTTTCCCACGTTTTGGCTTTTGCGTAGGGGCGG ATACGAAAAGATACTTCGTACTCGGAAAAGTAGGTTGGAAATGTTTTGAT GAGGGTGTTTTTTCGGATGGGATGATTGGCTAAAAGGGAAATTTAAGTTA AGGTTAATATTTCTATCGAATATTTGTAATACATAGCATACCATTATCCA ATTCATTCTGACCGTAGACAGCAGCCGTAACTGAAGCTTAGCAGCATTTG ACTGCATCAAATCCAATTCCTATTCTGGTCTTACTAAGAGCTTTGGAAAG TTCTACTAGATGTCTCTTTGCTATAATTTAACAGtcaaataaaagaattg aaTGTGGCGCCTACTCGTACCCGCGACACCCTTAACCATAGaattataaa gcccgaagggctagatgtcgtactttagctgaaaagtgtgtcgtggttag gtaggaaatcctaactaggtcacgtgacattacaatataatttcagcgct tgatcaatctgaagcttcgcgggttttcgaaaacaatagcaacaatagca acaatattttttccgatattcaatttttttgcctgcgatggcttaaagta cgacatctagcccttcgggctttataaatcaaTGTCCTTAACCTCCCCCA AAGAAGAGTATCTATCCTTACTATATTGGCTATCACTGATGTAAAGACTT CTGATGTTTGCTGGTGTGCTGCGTTGTACCATGGGTCTGCTTTGTACTTT GTGCTTGTACTTGTTTAATGTTCTGGAAAAATTCCGGAGTCTTGTTCTCC ACGTTTGATATTTGTTTGCCGTTCACCCAAACTCGATACATATATCTCGT TGGAGTATTGCTGGGATATTGGCTAATCGAGACATACGAATATTTGTGAA GAGGCAACGCAGCACTGTTGAAACACCAGTTGTTACTGTTATATAAACCA GTACAAATATGAAGTTTTGAGGTATGTGGCTCGATAAAAACCGCTGGTAC TCTACGGCCGTGAGCTCCAGAGTTCCCACCAGTTGTAAAATGTATGATAC TGGTCCAATGGTTGACGATATAAAGTGGTTTGATTTGAAACGATATTGAA TAAGCTGGTGACCAGGTCTCGAAAGCGTCGTGGATGAAATTTTTTCGAAG TGTATAACCTACAAGGAAATAGGAGAATATCCTTTTGAACGTTTTTTTTT CGCAAGTAAAACTATAAAAGGTATAAGTGCTTGAGCACGAGGAAACTGAT TTTTCCTCAGAGCTCCGATAATCAGTATTTTTGCATACTGAGCTCTATTG ATTAAGGCCggactccactttcgcgcgaaatgggcgacagttttttctta accttttttgcctgaagaaaagattacgtcataaaaaagtttcgcgcgaa caaaaaaaagttgaaggaagttctacttttttcatccgttacgtcaattt ctaccaatggaattgcttcattttgtaaccgaccaatgaccttacaaaaa catCTAAAAGTTTTCGcgcatgtcgcgcgaaagtggagaccggcctttat gaCCAAACACCTATTAGCTCGCTGTAACTGTTTTCGACCCAGAAAAATAC CGATAAGGCTCTCAACTCACCAACTTGTGGATCGTTGTGAGTAAGTTTTT CATCTCTCTTCTTTTCGTCATTTTCCGGTTTCCTCTCCTTTTCGTCTTCC TCTTCGTTCTCCACGATTtcgtcttcttttttcttttcttcgtttGGAGT TGGAGCatcagctgaaatttaaagTGTTCGCTTTTATTTAACTGCAATTT TTTCTTTCCACTACAGTATCACAGTTAACTCTCGTTAATTTGAACTCGAA CAAGAAGTCTAATGGCTGAATAACAGAAAGActtgaattacagagagtat tctACGAggtttagttcgaattatagaaagaatcGAATTATAGAAGCCTG CTGTATAAAAACAAATCCTTTTAGGTTAGAAACGTAAAACCTCAATATTA AATTGCCTTTGTATGTTTTATATGATTTTCCATACCTTTTTGAATCAGtt catctttattttccttTGATTCTTCTGCCGGTTCGTCTTCTTCAGATTCT TTTTCAACCACATCAATTCGTCCTCTTTCTTTTCATCTGGTTGGTCTTAG TCTATATCCACCTCTTCTTTGTCATTGCTCAGCATAACATCTTCTTCTTC GTCGCTTTCAATCAATTTCTCGTCTTTTGCAACATCTTCCCCAAACGCTC TGGTTTGCCTAAAAGTGGAATTCAAATACTTTTCAAAATCATCTTAAGTT TCTGTGATGGAATGTTTTAGGCAGTATGGGTTTTAGAAACGTTGTTGATA ATGGTATGGTAATTAAAAAGGACACAGAGCAGATCATTTTGATTTGTATA CagcaaattaaaaataaaactgataTTTAGGTTTATACTTACAATTTGCG ATTGCAATGAAGCAAGCAGTGAGAAGAAAAATCTTGCAAAGGTTCATTCT TCTTGTTGGCTTTTGTCTTCTTTATCTTTGGTTCAAGTCAAGAATGGAAA TCCATATCGAACCCCCGCTATTTATACCCGTCAATTTCTTGTTCTCTTCA ATTCATTTCGATCCATCCCCGATTAAAAAGTCATGAAAAGCTTTCGAAGG GGTTTTGGCACCGCCTTTACACATGCTTATGCTTACGTTGTTTATTCGGT AATTAAAAGGAGGTTTACGCAGAAATGTGGTTCaattaatctttttttat tttatttatttattctttatttaaagtTGGGTAAAAACCTGctagaaaat acaaaagtaaATTCTAATTAAGTCCAACTATcgtaaaaatattatttaaa agctattaaaataaaatcctaagaaaaagaaaacgaaaaactatttacaa tttttgcaTGTGCATTTTGAAAGTATATCGCTTTCGTTTAGAGCTTTAAG AAAAGAGTCAAGATTTTCGTTTGATTTAACAGAAGATGGTAGTTTATTCC AAGAAGATACAGCTGCTTgttgttattttatttttattttatttcctttc atcatcaaatattattttttctttgtatagACTTTTACCACAGTTGAAAC AATCACAAATGCTAAATCCGCTCATTCATGGCTTTTGGAAGCCGCTAAAT CTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064412TCONS_00064412Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064412-proteinTCONS_00064412-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_414supercontigscaffold_414:31703..37805 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.47 24.67 17.79 16.15 27.21 19.17 30.3 32.12 38.14 51.54 43.57 33.91 28.34 29.56 22.05 21.3 39.69 37.14 30.72 25.7 20.57 23.82 14.8 28.41 70.04 57.15 12.26 12.62 17.95 20.27