XLOC_040076 (gene) - C. hemisphaerica

Overview
NameXLOC_040076
Unique NameXLOC_040076
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_404:494369..500269-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040076 ID=XLOC_040076|Name=XLOC_040076|organism=Clytia hemisphaerica|type=gene|length=5901bp|location=Sequence derived from alignment at scaffold_404:494369..500269- (Clytia hemisphaerica)
TTGGAAAAAATGTCCAGGAATAGAAATACCTCTTGTAGGCAAAAATCTAT AGCAATTTTAATAAGACAAAAATTATCTTTTTTCAGCATTAGATAATGCT GATTGCCAATGGCATAATATACCTACAAATCAATCATGTTGGAGAATGAG TTGAACGGCTACCAAAAGCATTTCTACAAATCGAATGGATGTAAGAAGGC ATTGATTCAACAAATCTCCAAGGTGAAAAAAGGCTCCAAAGTGAAATGCA GTACGGAATCACTATCTGACCCTGCAAAAGTTATTAACTTCATTAACGGT CATCAGATTAGAGACTTGCATCGTATAGCTAAGAATAACAAAACAAGGAA AGCTGATGATGTCAAAGCTTCCAATATTATAGTTCCATCAAATGAGAAGA TCATGAGGAAATTGACTAAGGGAAAAGAACAGATATCATGCAAATGTCCT AACGGGTTCAAAAGAGGTAATAAAACAGCTCAAATCAATGGAGGATGTTT AAATCAGTCTTGCAAGAAACAAACTCATTTGTCACCAATAAAAAATGAAC GCTCCAAACCAAGAGTAGAGAAGAATAATCATCGAAAAAAGAACATAAAT GATCCTGAAGATGATAAGCCGAAAGAATATGTCCTTAGATCTTCTCAGCG CCTTCAGTATATCCACAACATGAAGAAAAGGGACATTGAAATCGACAAAC CATTAGTGGATAGGATGACAAATATGTTCAATGAACCAATAGACATTAGA TTAGATACAAAAAAGCTGAATATTCCTGTGTTAAACAACAATCCTCAATC TAGAGTAAATTGTGAATGGGGCGATTGTAGGCTTTCATTTATTAATGCAG AAGACCTTACAGACCATGTTGAATCATCTCACTTGGTTAGTTGTGAGGAA AGTGACAACTGTAGCTGCATGTGGAGAGATTGCAAGTTTTTGAATCAATC GTGTTCTTTTAAATGGCTATCAAAGCATGTTTTACGACATTGCGATTTGA AGCCATTTAAATGTGTTATTCTTGGTTGCGATATGACATTTAGTACACAG AATGGACTAGCAAGACATGTCCCAACACATTTTAATGAAAGTCGCGTTAG ACGTGCTTGTGTCTTAACACATGAAGCAGCTAGGAAGGAAGAATTAAATA AAACTAAAAGACAATTAAGTGCAACTTTGAGTACTTGTTCAGAATCAAGT AGTGGTACATTTTGTAGTAGTGGTAGCAGCAGTCTGGGTGAAGAGATCAT TTTTGACAACGCCTCAATACCAAACGTATCAGTTGGCAAACATACAGATT TTCGTGAAAGTAAGTCCGAAGCATTTCTCATAAAGATGGAATTTCGCTTT ATTATTGTTTGTTCTCGTTTTACAAAATAAATCGCAATAGGCAATCAAAA TAATGTCTCCTGGAACAGTGCCATCTGTTTCTTATTTAATTACTGTTTGT TTTTTGCGATATTACTCAACTCTGCCTGAGAGATTGTTGACGTCATAAAA TTCACTTTTTGCATATTTTCATGTTCTCAGATCATCATACGTTCACGACC AAGACATACAATTATGTGAAAAAGAAGATTCAAAAATCCACCTTTGATCC CTCTACCAATTCTGGATATTTAGATAAAGCTTTTCGTATTGACCACAAGG TAAGTGTATTTAGAATATTCCTTATGAGATTTGGTAGCGTAGAGAGGTAA TTAAAACTTTTTTGTATTGCCAGAATTAATTGTTAATTGTTACAGTTAAG GGAGGTAAAATGTATGTGTTTTTTTTGTTCATTATGATAAGAATTAACTT GAGAGATATTTTCGATGCTCTATTATGCTTCTAATTCTAAGTGAATACTT TCTATGTTTTCCTGAAAAACCAGGAGATTGAAATTGTATTATTTTTGTTA CCTTGGCTCCATTTTTTTCCTTAGGTGATAGGAAGGAGGTCCGGTAGTAA TGGTACAACCGAAATGTTATTGACCCCTTCACTCAATAATTTGTGAGTTA GACTTTAATGGTATTATTGCGCATATTGTTTTTGCATTCATTTCCAATGT GTTGTTTCTTTCACACCTCTTCACTTTTCACACTGTCCATCATCACTTAA ATGACAGTTTTCAAACAATCTATTGTTTGTAAGTCGTGAATCAGTCTTTC ACCTTGTAACTAACTATAGGGATTTTATGTCTTCAATTGAGCTCAATTTA TTTTTCATTAAATACCTCTGAATACCTAATACAGTTATGTTTCCAAAAAG TATTGTAGTGGAAAGTGTAGTAATAAGTAGTTCGTTTGTCCAAATAGAAA TTTTGACTCCCTTAGCTGGAAAGAAACGTACGAGCTTTTCTAAACCTGAA CACCCTCTTTAACCAGTAAAATCATCTTTATTTTTAGATTCCCTCGTTCT TCATTCTGGTGTGACAGCAATGAATTTCGAAAACGTAAACATTCTCACGT TGAAATCCCGATGAGGGACATGCCGGTCGATATCAAAAATAAATTATACG ATTCCGAACATGCTTCAAGCATTCGACGTCGCAAGAAACGAAAGTGATCC TTTTGAATTCGTGCATCTCGATTTCTCTCAATAGAACTAAATGTAAGTTT CAACTCATACATCCTTCTTATAACACCAAGTTCTATCAGATAGAGCAAGA ATGGCGAAGTCTGGGTTCCCAGTGGTGAGAAAACATCTACTAGAGAATAG ACTGCTTTAGAAGAAGTCAGGGAAATTCTTTCCAGGATACATTGAATTAA GTGTTTTAGCCAAGCTTATCTGTTTTAATTGACTTTTTCTCGTCCATTTT GTTAATGTTGGCCAGGAAAAACAGATTCAAAGTTTTTAGCTTGATTCAGG CAAGAACTACACTTTTATTTGAGAAATGTCAAATAAAGAAAGGTCGATTT CTTACTAAAAGCCATNTTTTATTTGAGAAATGCCAAATAAAGAAAGGTCG ATTTCTTACTAAAAGCCTTTGGAAAGATTTTCTGTGGCACTACTGGAAAC CCAGCCTAAAGATGCTATTGCATTTTAAAACTTAATGGTTTGTTTTGTAC CATACTCGATTCTGTTAAATTATTTTCCTAGGTAGTGCAATTTTTCAAGC AATTTATTTCAATTTTTCAAGCAATTTATTTCAATTTTTCAATTTCAACA ATTCCCAATTCAATTTATCCTTAGATAGGTCTATGTTAATTTTTCTAAAG CATTTTAAACAATGATGATAGTTTCTGTTGAATTTTTCCAATGCTTAAAT TTAGATTTTTAACTAGATATACATTTTCACATTATTTCACTTTTTCGTAG TGTATTAGTTAGCTATGTGATGGGTTTAGGTTAGATTTTAAGCATTTTTA GAATGGTCCTTGATCTAGCCGGGTTATCTGGTTTAAGATGTTTTTTAGTA AATAGTAATTTTCTTTTGAACATTCATTTTCGGTCTTCCCAAGGCCTATA TTAGAATTACTCAAAAGATGATTTAACTTGAAACATCATTGGATTGATCA AATAAAGTTGGGTGTTTTTGGAGGGATTTAGGTCTTTTTTTCACTTTATC ATTCGTCTTGACAACCTATAGAATTGTTTTTGTACCACTTATTTCTTTCT TATTTTTGCTGTTATATCTTCTTCTAGAATACTTTAATTATATTACTGTC CCTTCGCCAGGCCTTCAGTGGTTTGTGTTTTTTCTCAATTATTTTTACAG TATTTTAGATAGTTCAAAATTTTAGTCAATTGTTATGACTTATGATTTGT GCATTCAAGAATTCAGTTTTTGAATTTAGTATTGTTTCAGTACTTAGATA GGCATATTGAAATCAATGCAACATTAGCACCATTCTTTTTTTATTGTACT TGAGAGCTATCGTAACCATTTTAGACGATGTTCGTAATAATTCTTTAATA GCATTAAAGTGAATGCGCACGTATATTTTTGTTGATTTAAAGTACTGTTT AAGAACTTAGAGCTAAGACTTAGACAATACTGCTTCCACTAACTTCGGCA ATTCAAGTCTACCTTAATCATAAAAACCTTGTTAGAGTTAAAAGTGAAAC TTGTGGTGTAGAATTCCTTATGTCCTTTTGAGGGATAGTTATTGTCTATG TCCACATTTAATGAATAATATAATATAAATTTATTGTTTCATGTACATAT TTTTTGTATATTCGGATAATATTGATATGGTGTATAATTATTTTTTTTGG TTGGTAAATTTAATATTTAAGTCGGTTGGTTACTCTGGTGTAGGTTTAAC AATCTGTGATACTGAGTGTTGTTGAGTGGCACTGACCACTGACCTTTATA AACGCTATCTTTGATATGAGTTTTTAGAAAAGCGGTACCCGGAAAGAAAC CAGTGCAGTGCTTACAACAATGGTGCTACATTAGTAGTTTTTAATGAAAA GAGATCTAGTGCTCTCGGTGCAATTTACACCCACATTGAGAAGTGGTACC ACTAAAAACTCCGATCAAAATGTATGGCTTGGTCGGGTTTTAAAAACTAC CTTCAGGGATTATGAACACAATAAAGTCAGCAACGTATAAGGGTCAACTC TCGTGTTTTTAATCGCCCCGTGACGGCCCGGGTCATTATNCATAAAGTCA GCCACGTATAAGGGTCAACTCTTGTGTTTTTAATCGCCCCGTGACGGCCT GGGTCATTGTGAAAACGAATCCTTAGAAATGAGTACGAGCTCGGACAAGA CGAAAATATCTGTTTTTGTTTTCATAAATAGCACTCAAACGAGAGGAAGT AATCTGAAACCTTTTCTCCTATTTTCTTTCTCATTTAATCCTTTAACAGG AAATCTCACAAGTGAGCTCTTAAATAAGATGAGGAAATGTCTGAAGCCGA TCCGCTACAAAGAAATGTCACGATTTCCTATATGATCTGCATATGCTCTA GAAATAGAGATGCCTGGATTTTCAATAGATCTTTCCTGGTATCCTTTAGG CCTTCTAGTAAACAGATTAACCAAACAAGAACCTTCCGACTTTTAGTTTG ACGACGGTCCTATTTTATTGTTTGTTAGTGTTTGTTTTTTCTTTTCATAA TGTAATTTACAAAACATTTTTTTAGCTTATTAATTGTTTATTCAAATTGT TTGTTAGTAATATTTATTTGAACACCAAACAAATTATTCTTTGGTTTCAG AATGTGAAAAATATTGTGAACACATTGAAATGATATTACGGCTCAATCTT GATGAACCATCGTCACCGCCAAACTTTTCAAACATTCCTGTTTGTATATT CTTTCGAGTCTCCATTCTCTTTTGTCATGTATGCCATAGAAGCTGATATA GCGGTATTTCCAGAATCTCATATGCTAATTTGGTAATCACAATACGTAAA ACTTTTAATCGGGAATATCAGTACGATTTGTCTTTTGCTCTCTTTTATTT TATTTTCTCTTTGAAAGCTAGCTCCGTAAAACAAATGCTCCATTGAAATG AATCTTTCGGCACTCCTCACCTGTTCACCACTTCTTTATTTTACAGCACA TTGTTTTTTATAAACATACCCAACCTCATCCAATGGTAATGCATAATTAA ACATCATCAATTCATCAATAGCTCCTGAAAAATATCTATTCTCATAATAG TGTTTTCCGATACCGGCAAAATGGCCCCAATCTTGTGACAAATAGCCAGT ACCATCTACTTCTTTCACCAGATGTCCATCTAAATATACTTGTGCTTTAT TCTCTTGGGAATCATAAGTCGCTATTAAGTGTACCCATTGTCTTGGTTTC ACTACAGCAAAAGTATCGATGTCGAATACGGTTTTCCCTAAGTGATCACG ATGAAACCATTTAATTTGACCATTGATGACTGAGAAATCGTACTGATCAT GCTTGTGCAACGAGCGACTTCCGATTGTGTTGAAAAGCTGGTGTCGATCC C
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063940TCONS_00063940Clytia hemisphaericatranscript
TCONS_00063939TCONS_00063939Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063939-proteinTCONS_00063939-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:494369..500269 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.62 7.12 3.15 2.22 23.08 17.7 14.26 15.43 8.28 10.67 8.34 6.44 5.98 5.09 5.25 5.37 5.49 7.11 3.01 3.83 3.84 3.75 6.78 7.53 12.12 13.31 6.29 6.63 5.57 5.39