XLOC_038893 (gene) - C. hemisphaerica

Overview
NameXLOC_038893
Unique NameXLOC_038893
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1483838..1487281-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038893 ID=XLOC_038893|Name=XLOC_038893|organism=Clytia hemisphaerica|type=gene|length=3444bp|location=Sequence derived from alignment at scaffold_361:1483838..1487281- (Clytia hemisphaerica)
TGGGTTAGTTATACAACTAGCCTGTATGACTTACAAATCCATTCATTGTC
GGTTTTCAAGTTGTTTGGATGAAGTTTTTTATATTGAATGTTCATTACTA
TTTTTGATTTTTTCGATATAGGACTACCAATAATAAATAAAAACAGACAC
ACACACAAAGAACAATGGAGTTTAAATCACCAGAATGCGTTTACTGCAGT
CGAACATACAGCAAATTCAACGAACCCATCTACATCGTATGTCTGTGTGA
ACAAAGTGCTAAATATGCCCATGGAAGTTGTTTTCGTGGATATCTCTCTG
ATCACAGCTTTGGTGTTTGTGGGCACTGCTTCACCAAAACTAGAATCGTC
ACGGATGGTTACAAACCCTTCTCTGAGGTGAGTTAGTTCATCTTGATATT
TCTTTGCGTTATTGTTTGAAAATACTTCAGGTCGTACAAACGGGACAAGC
TGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCTTTAAGATGTAAT
AAAAGAATCTCATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTC
AATGACCAATTAGTGAAGTATCTTGTAAAAACTCCAGCTCATCCCGTACA
AACATTTACTTTCGAGAATTTGACGAAAAAAATCCTTTTCGCGAGCATAA
TCTTTTGCGAATCAAGACATGAAAAAATGATAAGTTTCACATGAAAAAAT
GGACAAATATTCTTCAATAGGCTCGAAACTTTTGTCTTTTGAATCATTAG
GCTTTAACAGGGTAGAAAGTACCATAAATGATACATTTTATTCAAAGTTT
GAAATTTTACAGATTTTCTGTTTTTTTTTTAAGAATTTTTTTTGCAAGCA
TAATGGCGAATGGCCCTTCCAATAATTTTCTGAGACATTTATTTTCGCGA
AAAGTGTCAAAATTTGCGAAAATCGTGAAAGTTTCTGTACGCCTAAAGTA
TATGCAAATGGGGCGTATAGATGCTCAAAATTCTTTCTGTAAATTTCCGT
TGTATGCTTTAGTAGCTTACGATGATCCATGAAACATCATTTTCTGTTTT
GGAGATATTTTAAATGACGTGGTTTTGGGTATACGTCAAACATTCGGAAA
ACGTCATTAAATTTTCTTCTCGGGAGCGGAACATATTTGGCGCAAATCCT
GAAACGAATGTACGACGACTTTTTCCTGTTATAAATGATCCCTTTATGCA
AATACATTTTTCGACAATGGCAACGTTCCAACTAAACTTTCAGCAATCCT
TGATAAGAAAGTTGCTGCATGGCGGCTGAAACTTCGCTTTAAGCAATTTT
TCTAAATTACCTTTTTCAGTGCGCAATTTTTGTGATTTATTGACTGATTT
GTTGCGGTCTTAATTCCTACACAAAATTTACCTCAAAAGTCATAAATTGA
AAAGTGCAATTTTGATGTCGTGATTTATTTGACATTGTCCTTGAACCCCA
TAAATTGATTGGTCACCACAACAAAGGGCGCCGTGCAGTCAACACCTGCC
TTGAATTTAAAAGTTTACATTTTCATTAAAATTGTGGCTACCACTTGTAA
ACAAAATTCATCCACATGATAAGATTGTCTTTTCGTAAGCTTCAATTTTG
CCACATGCTCTAAATTTCTAAAAGCAAAGTCTTTTCAAGGAAGTAATTGT
ATTTCGGTATCTTTGTTTTTCAAAATAAAAAGGAAGGTTAGGAAGTATAA
ATATTTTTCATTATCTATAATGAATTCCTATGTCCCGCTCAACCTTAATG
TCACAAAATTAGCTTTTCAGTTTTCTCCTATCTCTGAATACTTAACAATT
TAAATACAACAATCATTCAATAAAGATACTATTTACGTTTTTTTATAAAA
ACAAACCAAGTCATGAATATTTGCAGGCTTTGTAGACTCTAACACACCCA
ATTTCTTTGGAAATTGCACAAACTACTCACAAAATGGTGAAAATAAGAAC
ATTTTAAGAACATTCTAGGCTTAAAACTGAAAAGTTAAAAAGATCCAAAG
ATTTGTTAATATATTAATTTAGAATGTTGTGAAAATGATTTCTTTTATCT
CTTTTTCAGTGGAAAGTGAAGTGGAAGCCATTTTGTGGATTCTGGAAACG
TTTCAACCACAACAACAAATACTCAAAGATCGTCTACTGTCACGAAGTGC
AAGTCAACAAACATAAGAAGAAGATCACATACGAAGATGTTCCATCTGAA
ATCCCATGGAAGAATGAAATTGAAGTCGAAGAAGAAACCAATACCCTGTT
CGAAATCCCTGGCGTTGTCGAGAAACAGCACTCCCTAGACGAAGGTGATG
GTTCTAGTGATAATGCACTTGAAAGTGAACCTGAAAACCGACAAATTAAT
CGAATTCCAACAGTCTTTAAACCAAGAGGATATCCCTTCGTCAAACGACA
ACAAGAAGATACAACGGCTGGGAACCTTGAATCTTCATTTGAGTATTATA
TGAACTCCAGCAACCGTGGTAGTTTCAGAAGCCAAAGAAACTTTTACGAT
AATAACTCCATTTACACCATTACAACAGAAACGAACGATTCGCCTTCTGA
ATACCAATACAGCGCTTCTGAAGATGATAACAAAAGCACCGTATCCAATC
AAAACAGGCGTGCATCGAAACTACGCACCATTGGGCGGTCCTTTATGAAG
AAACTCACTTCAGAGCGTAGTTTTGAAGAAGCGAGCAGCGAGAGCGGCGC
CAGTCGGCGGCCATCTAATAACAATACCGTACAACAATTTTACACCATTT
CCGAACTCCAAAATACAGAGGAAAAAGAGGAAGTGGCCGTGTTACCTAGA
GACAATGATATCATTTACATGCATTCAAGAACTAATTCAAATTTACAAGA
AGACTATTGGGGTATGAATCATCAAGAGGACGTCAATGCTGATGCTAAGA
AGAAGAAGTTCACCAAAAGTCGCAACAAAATGAAGGGTTCAGCTTCTTCA
AATTCGACCTCGTCTACAGCATCTTTCAATAATGATTCTTCAACAAAATT
ATACGGTGTTTCAACTAACATGTTCAGACATAATTCGAACACTATGACAG
ATGCACCAGAGCCTCAAACCTCTTTTACCACGACTCGTATTTCTACCGGT
ACAGTAGATAAAGAGCGTCAAACAAATCTTTTCTATGCTCCTTAAACGCG
CCCTCTGTTCAGCTTTCTCTATGCTTGATATTTTCGTGTTATGTTTTTAA
AGAATTCTTTCTAACTTAATTTCCAGAGCTGAGTTATTTTAAAGCATGTT
TATAGCATACGAAATAAATTATCGTGACAACAAACAAGTTTTTATTAGCT
GGTTGACAAACGGTGATGAAACAGTTAACTTGATCATGTTGTTGCCAACT
TTTCTATTGCGTAACCCTTTTGAATATGAACCGAAACTTCTTTTATTATA
TGTTGTACAGTGACGTAGCAACTAGGGGGGCAAGGGGGGGGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062059TCONS_00062059Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062059-proteinTCONS_00062059-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1483838..1487281 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.41	5.59	2.53	1.64	0.18	0.17	1.09	1.15	4.08	12.95	0.32	7.7	12.37	9.01	7.28	7.03	3.34	3.59	6.78	6.99	0.82	0.61	2.1	2.64	0.71	1.36	18.51	3.28	1.27	1.09