XLOC_033956 (gene) - C. hemisphaerica

Overview
NameXLOC_033956
Unique NameXLOC_033956
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_234:294894..304405+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033956 ID=XLOC_033956|Name=XLOC_033956|organism=Clytia hemisphaerica|type=gene|length=9512bp|location=Sequence derived from alignment at scaffold_234:294894..304405+ (Clytia hemisphaerica)
gtttcggcaacgatgcaggatcttttaacatattattttagaacttttca
tgttattgagcaacgaaaaatttaaaaaatcacttttaaaaatccgaaaa
acctttttctcgatgcaattttactattttcaaacacctctgacatcttt
gcccttaaaaggacaacacattttgctgattcagcatttcatcgtagaaa
aaattgccgttttcggcaataatttccgaaaagagcaataattgcagttt
ttatcttaaacacccgactgataAGTCGACAGATCGAAGTTTTCCCTCTT
CTCTTATCTCaggtttgtttgtttattgCTTAATGTTTGTTTTAGGACAC
AATACTTTAAACAGTACCGtgatacttacttacttttgatacttttgatg
gGTTTTTTGAGTCTCTCAATCATCCAATAATTTGGATGGAAATCCGATGA
TTCACCATTTCTGTAGGGATAATAATTATTAGGGAGCAGTGGTTCGTCCA
GCAGTgtggaaagaaaaaggtcaagttgtcttttgaatttaatttttgtg
cagTTTGTGATATTACgagtgagagtgggtaacttgcatcagtggaggct
aacaacGCAAacggctaacatgcatagccctcaaattaaTGACCCGTCTG
GTGATTATTatgaatatagtttattttacgACCAGCCCGCCGGTATGTAA
TATCTTCATCATTTCACATTGCCCAACCGACTCACaaaaattgagaagaa
tcgaGTTGGTAAGACgctaaatttgtcggactttttctgtcgatgacgtt
tcctttgtttaaaaattttataattggcaattttatttgcggcattttga
ctttgtttatcatagaccttttttcaaaggcaaCGTCCTgctgaataatt
atgtagtccagccataaaaacaacgatagagccatgcataattactgtat
catgcatattgtaatgcatggttttattattgtttttctgctggactaca
taattattcaacagggtggcctctttgaaaaaaggtctattacatgCATG
CGCCATTTTGGTTCGGAGgtgtcacagtgttcaaaggtcataatttgaaa
ccacccataacacgcggttgttttttggctgctggctggctggcagtttt
agcgactccagaagtcacgcaactatcgttgacgtcaaaccaaatgtttc
atttttccgtgaactttgaacccttgtaACTTTTCTTCTATNCTAGATAG
CTAAAACATTTTCCAACCTTTTTCATTCATATAAGCTATCTTCGATAAGC
CAAAATTCATtaaacaacatttttcaactgcgTAATGATTAGGTGCCAAA
TCTGCAATTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAGGTGCCAAATCTGCAATTATTCCGCATTTTTCCCTATCGATTCCGC
GCATGCTAATTCTTGCGATTAAAGGCTAGTTGCCCGCTAGTTGAGCTCTT
TTAAGATAGCTAAATCATTTTCCAACCTTATTCATTCATATAAGCTATCT
TCGATAAGCCAAAATTCATTATTaagcaacatttttcaactgcgTAATGA
TTACGTGCCAAATCTGCAATTATTCCGCATTTTTCCCTCTATCGATTCCG
TGGATCGGAAAACTGTTAAGAAAACCAATTGGCTATTAAACTGTGTTGAA
AAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNaggcctatgacccctcattttc
tttctttttcaaagctctacaagataggatagattttgaaaaaaaaatta
aaacttgaaaaatcttctggagttgctatggcagtttccttcaagaatat
actccaaaaatggatgatggataggaaacccgaaaatttttacgaccgac
cgactttttagacccaacgaggatgcaaaatgaaaatatttgtgaTTGCT
GCCTTACCTACAATTCCGAGGATGATTATGAACAATATTTTGTAACTTTC
ATGATGTCTTATTTATTCATGCTTCCACAGCGCTCTGCCAATCACTGCCT
CTGcaactttcaaaacattccATTTTTTTGCAATGCTTCCACTGCACTGG
GTGTGCTGCTATTCTGCAAAATCAGCAGAGCACGATTATATCTGCGATAT
AATTATGATAGCGCTTGCTGTGGTAAGCGTTTGAAGAGCAATTTAGCTTA
CTGTAGGGGTGGTGTAGTTTCAGAGTAACATTCTTGCCTTGGgagtttta
aagaaaaaggctgtttaaaaattgtgatgGAATTCGGCCGTTGTAAACCT
CCGAAAATGGCGATCTGAAATGAAAGCTTTGgtcaaattttggtcaaatc
atgAAGACTGTTGTTAAGAAGGTGGGTAGGTATGTTTGAAAGTAACGGTC
CTTTCCTGTTACGCGTGGCGACTTTTTATAGGGACATCGCCCCTTAAGAA
GTATTGACTAATCTTCTTCTAATAACCCCAAAGTTCTACCCCAAACCGTT
GAATGACCCTTAGAGGATGTGTAACTCTGACAGAGAGCCGAATTAGGATG
ATAGGAAAGACTTCAAAATGGgagtattttgaatttgaatgaattaTGAG
AGTGGAGATGACCTGGATCAGGATTTTAATGCAGAATACAGTGGAAAAAG
TCTTTGAGGTGATTTGAAAGTTGACACAATTTGTAACAATTTTTTGGGTT
TGATCAGAGCAAGAAATTAAGGTTGCATACCATACTTAAAAAAATCCCTG
GTCATAAACTCAACCTTTGTTTCACAAATATATATTATAGGAAAAATGGC
TTTTGTGGAATTTGCACCAATTCGAATCCCATTCTACCGAAGATTGCAAA
CACTTGCAGTATTGATATATTACTACTCATTTTATTTTGGTGCTCTTTTG
GGATGCGGAACCATATTACTATTGTTGTTCAGCTCATATTACCCACTGGC
TCTACTCTACCTTGGATGGGCTTATATTTATGATGCCAGGACCCCAAGTC
ATGGTGGTAGAAGATCAAAGATCATGCGTGgattaaaaatttggaaatac
ttccGAGATTATTTTCCAATCAAGTTGGTCAAAACTGAAGATTTGAATGC
CAAGAAGAACTACATCTTCGGTTATCATCCGCATGGTATTTTGTGCGCTG
GAGCTTTTTCAACTTTTGCAACTGAAGCAACAAATTGGAGTGAAACATTC
CCTGGCATTATTCCTCATCTTTTACCACTAATTGGTAAGACttgcaaata
tttttttacaatggATGATTGTTTAAGTGTTTTTATAGGTTCCTACATGA
TGCctaattatttttctaaatccTAGGAACAaactaagaacaatttaagc
ttcatattaaaaaaaaaaagatttcacatAACTTTTATAAGCGCCTTCAA
TCCCATAGAATGCACCCCCTCCCCCTGAGCTTAGAAggggggctaaacca
tttttgctggattgggggctgtatttttcaaaaatactgggggctagctt
gctagggggggggggggggggtNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAGAGCTGAcaggttgaagatattttaaattatgttaaagat
TTATGCTGTGGGGAAAATTTTATCactcttgaaaaaatttttacctGTGG
CGCAATAAATTTTTCTACAATTTGCATGCAAAGTTTCTTTCATATTTTCC
TTTGTGCAGGTGAgggctatgtttctagaatttagtcgagggctggaccc
ctctgcacactatgtaaATTTTAAGCTCAATAGTTTTAATAAGAAATAGT
TTCAGTCTTTTAAGGTGATAACACCTAGCTATTTCATATTTGCGGACGTG
TTACCAGGGTGcaccaagaaaaagaaaagctctttgaatttaatttctca
aaacCCAAAACGTAcaagggacgaaatttttgttgGAATTTAATTTAACG
GCTTGGAgagttttttgtttacaatatagCCTTTTTTGCCCTAcaaagac
caattttagagttgattttccaaatattgaaaatatttgtgTTTCGCAGA
ATTTTTTCCGCccaaatttcttcccttaaggtaacagAAAAGGGGCACAA
GGTTCTATGATTATGGTTTTTATCATTTTGCTTGATGCcgaatttaaatt
tatttgagCCACAATGAGCCTTCATTCTTCCTTAATCCTAAAATATTTCA
CCATCTCTTTTGCAGCCCTATTCAAACCACCACTCTTTCGAGATTATATT
ATGAGTTCTGGTATGTGTAACGTCACAAGAGAAAGTTGTGAATATATTCT
CAAAGAAAAAGGTATATAGAAAGTAATCTAATACTTTTCTCCAAGATTcc
gattttctttatgattctgatgagcaactttatttattttgttacccttc
attttttatcttaaaTGGATGAACCTCTACCTATATTTTCACAGCCTTTT
TTCATTATTGCCGATACTAAGTTAAGTAAAGTCGAACTTATTTGGGAGTT
TCTCAAGTGtgacatttgaaaatttgtgtaggaCCCCTCTATCTCATAAT
ATATCTCTATTACCTTTTTACCTTTTTGTGCAGGTCCTGGAAACTCCATA
TGCATTGTTGTTGGTGGAGCACCAGAAGCTTTCGATGCACATCCTTTCAA
AGATTACATTCTCATATTGAAACCGAGAAAAGGATTCATCAAGCTGGCAC
TCAAGACAGGGTAAGAAGAAAAATTGCTCTGGGATGTTCTTTTAGTGGAT
AATAGACagatttcactgaagattgccatcttggttgacatgaaattttg
agtATGAAGATTAAActaaatcgttttctttactcaaactagtgGATAAT
AGACATTCTTTTTATCATCTCTGCATTAGTGTTGGattatcagggtgaaa
attgacaaaatgttATTCTTAATTTCACCTTGAGGGCGAGATTTGAATAC
AAAAtaggaaaaatcaaaaggaaacattatttttataagGAGACGAGTTA
TTGCGTTCATTAATTATACGTTTTATAAGAAAAGGGTTATGAAAAATACG
ttaatgttaagaatatttcactcTCAGATTAGGAAAATTCCAAAGAGTAC
TTCACCCTTAAGCcaaaaaaacactattcttttaaaaaagcgtgtagcca
AAGAGATCATGAGGAAAAACGAATAGTGTCTTAACTTGGTAGACAAACAC
TACTTTtcaaattgattgattgattgattgattgattgattgattgattg
attgattgattgattgattgattgattgattgattgattgattttaggTC
AAGTCTCGTTCCAGTCTTTGCATTTGGTGAGAACAACCTTTTCAATCAAG
TGAGCAATCCACCTGGATCCATGTTACGCAAGATCCAAGAGAAAATCCAG
AGCATGATTGCATTCGCTCCAGTCTTCTTCTATGGGCGTGGCGTGTTCCA
ATATACGTTCGGAATGATTCCGCATCGGAGACCTGTACATGTAGTTGGTA
AGAGTGCATCCTTTGGGCTTTCGATGTATTTAGTCTTTGATTGTAACACG
CCAAACAAAAAAGTCACCATCTCGTTGTCAACGCCTTTTTCGCCAACGCC
TTTTTCTCCGTAATTTTGATGATTATGATAAGTATTAAAAATTATTCTAA
CTCCCAGGCTAGTATACcttgtttgaaaaatcttccaACCATTTATTTTA
ATCCCCCCCATCTACTAGATACCGTAGAGAAGACCCGAGAGACGCCTATA
TGCGTGTTTTTATGTCGATTagagatttagaaaaaaaaactttttctaaa
aaaataacgTGCCTGAATGGTCAAATacgttaaaaatcaaatttggcggg
aacttaatttagcgaaatccgccaaattttcttcccgtcaaaatttcttc
ctttaatgtagtTTCAACTGTTGTTCTACTTTTATTCAGTTGGTAAACCG
ATCGAAGTTGCCAAGATAGAAAACCCGACCTACGAAGAAATTGAAGCGCT
TCAGAAAATTTATATTGAAGAATTGAGAAAACTTTTCgaggaaaacaaag
aaaaatatgagAAAGATCCAAACATCAAATTAATCATTAACTAGGTTCTA
TTTCTTCTTCTTAATCAAAATCAGACTTCTTAAAAAGATAATGAAATATT
GGAAGAAATTTTATGTGAAGTACTggtattatatttttcaaattctgagt
TGTTTGATTGGTCCGTTATGATTTTAGGTAACGCCtataatattttatat
attggttttattgaaagatatttcaaagttttttaaaattttttcttgtt
gATAGATTTTTACACTCTGAAGATGACCTCTTGTTGTGTAGGTCGAATAt
acagtttttaaataaaaaacatgacgCTTCTGGTTATTCTTTTTACCATA
ttggtttcaattttttttcttaaagtgAAGGTGGACAAAACTTGTAACAC
TAATTTCATTCATATCAAACTAaacatatttacattttttgttaattgtg
ttTTTTATTCACTTAGCAAAAGACACTTTACTTGACCAATAATGTGATGT
TTTAAATCATTTTGTGCAATAGGTGGAggttttagaaattttataaatat
ctttttcaggtaaaaattcggtgaaaatattattgtttgtttttatatta
CTCATACGTAATTTTGAATAAGtcttattcttataaataattattattct
aaaatatttttaatggccttcattttttgatacatgttgttttttataag
catcttCGTCAGACTTGCATATGTTCAAACTTGTTGTCCAGATATAGCTT
ATATCTATataagaccttttcataaattacgtcacgaacatcacttgcct
cgtattcaaacatgTCATTGTCTCNgctataatagaccttttcataaatt
acgtcacgaacatcacttgcctcgtattcaaacatgTCATTGTCCCTATT
AAGTCCATATTATGTTAAGATATTCTTAACACtttttatgaaaaggttta
ttcATCCTGATCCAAGTTTGTTTTAAATCTCAGTAATATTATAAACATTT
GATTTCAACAGCGTTCgaataatacacccctgtcccGCAGCCCCCGGTGG
AACTCTTTTCGTCAGtgaggatagaaattttattgtttcaaggttaaaaa
cccatgattttggagtgcaatttttaaatatgaaaTTTCGAGTGGGGTTG
AAAtccaagggtattttcccaccggggacgaatttTTTGCCTACTTTTCC
AATGGGaatggggtcccagcgggtcggTGACACAGCGGTGTAGTGGAAGC
ATTAAAATGTGGCTAACATATGGAAAGTCATTTTTTACTTAACCACTTTA
TTTAATTCAACATCTGAAAAAATAAGGTCGTTTGATTTTTATCCCATTGA
AAATGGTTTCTTTATAGGTAGAGAGTGAccaattttctttaattttttca
tgtatattattatattagatattcttatcatgtacgcagttttgtaaatt
ttttcactgataatgttttagaaaaatgaatatgacTTAAATAATATGAC
TAATAATACAGAAATCGTTCAAAGTTTAAGTTCGGGTTAAAAATATGGTA
TTGAAATGTTTCCCCATTGAAAAGggattttgattgaaaattgaatataa
aaaaaagtaacaaaaatataaatacaaaaaaatagtaaaaaaaagtatcc
aaaatataaatacaaaaaaataataaaaaatagtaaaaaaaaagtatcca
aaataTAAATACAAAAGCGTTAAAAGCGTAATAAGTTTGttataaaacta
ctttaaaTAAGCTTGAACAAGGTTGTAACGAACACCGTCAAAAGCATTTC
CAAACTCATTGTAATTCTCACAGCATGGGAAGGTATTTGTTGATTCGGGT
AATCAAACTTTGGTGAATCGGTTGCACATTTCTCTTCATCTCGCATACAA
TTTGTGATATTCTTAGCGGCGCCCAAGCCACTATCATAAGCACCATGGGC
GTAACCAAACTCCCACCTTTGATACGCCTCACCAGCAAAATAGATTGATT
GTTGGACAGGGTGATCCATTGCCTTGTAATCATTTTCATTGATGCCAGCT
ATTTGATAAGAGTATGAACCGAGAAAGTTCGGGTTGATCGAGAAATCGTT
TCTTTTCATCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053805TCONS_00053805Clytia hemisphaericatranscript
TCONS_00053806TCONS_00053806Clytia hemisphaericatranscript
TCONS_00053807TCONS_00053807Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053806-proteinTCONS_00053806-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:294894..304405 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AWAT2acyl-CoA wax alcohol acyltransferase 2 Homo Sapiens
MOGAT2PREDICTED: 2-acylglycerol O-acyltransferase 2 isoform X1 Homo Sapiens
MOGAT32-acylglycerol O-acyltransferase 3 isoform a Homo Sapiens
MOGAT12-acylglycerol O-acyltransferase 1 Homo Sapiens
DGAT2diacylglycerol O-acyltransferase 2 isoform 1 Homo Sapiens
DGAT2L6diacylglycerol O-acyltransferase 2-like protein 6 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.24	7	34.86	39.2	16.7	12.68	14.84	14.69	10.68	11.91	11.9	9.01	8.29	8.77	7.73	10.66	11.31	10.34	5.01	6.32	8.31	9.8	7.22	9.53	6.51	7.73	4.8	4.28	6.71	5.29