XLOC_032165 (gene) - C. hemisphaerica

Overview
NameXLOC_032165
Unique NameXLOC_032165
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_186:104103..109971+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032165 ID=XLOC_032165|Name=XLOC_032165|organism=Clytia hemisphaerica|type=gene|length=5869bp|location=Sequence derived from alignment at scaffold_186:104103..109971+ (Clytia hemisphaerica)
GCTTGAATGCATTAGCGCAAGGATGCAGCTACTCGTCCGCTTACATTGTA
GTCTTCATTGGTGTTGACCGCTATATACGAGTAAAGTAAGccaaattgat
tttaaagctGTTAAATATCTCTCTTAATATACTAGAAAACTTAAATTGTT
GAAACAGCAAATAatgtaaaacagaaaaaatgaagcgactgcttatGTAT
CTTACGTATTAATTGTTgtcatctttcgtgacttcatcagcatatAGCTC
AACAAAATATGATATCATTTttatacaaaacaaaacaaaacacgtAAATA
AGggtttaaaacgtttaaaagttattttttgtaaaatttatagCTTCCAT
TATCAAAAGGATATCACGTTTTGTTGAGCTATAatatgctgatgaagtca
cgaaagatgacAACAATTAATACATAAGATACATAAgcagttgcttcatt
tttctgtcTTGATATActatactagccggtacccggcgtcgcacgccggt
taagctgttgCTGAGCGCACTTAAAGTTCTTTGGATGTTGAAGATGGCTT
AAAAGCACGATGAAATTAAAAAGGGAAGCAGaaatatcttcaaagtttga
ctctagtcctcccgggtgacgtatctgtTAATCatatttggagaaaaaaa
attgtgtccGCAGGGAGTTAATTTTCTCTCAAGTTAAAAATGATCCTGCT
TCGCTAATTCTAAATTTGCCATTAGTTCTcgataattttgaaaactttga
tgtcaagataaagGTCTAGGGCCACttgaaacatttgaaaactgaaatac
gcaaaaagtttcactttgatgaaaaaattactATTGACTCCACCTCCATG
GCTTAAAGAAAACATATACAAATCGGTTTCTGaaacaaaatataatttaa
aaaattcatcaGTAGTAGATAGAAACAGTTGCAGAAAGCGTTTGAAACCT
TTCATTGTTGTAGTGTGGTGGGCGTAAATCACCgtaataccgacaaaatt
ttcctaaaacacCGACATCGACGTCTTTTAGAGCAAGCTTAAGATTTTTA
TTCTTAGTACGAATGCTCAATATCACGAGCGTAGTAGTGCACTAGTTCAG
TTTTTCTTGGAGAAAACTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCGACTAGTGGATAAACAAATCCAGAATTTTTAGGGAACACTTTGAAA
GTgctatttttactttagtgctTACTTTAGTTgactttgaagaaaaacat
ttaaaagatcTTTGCAAAAAACGAGGGAACAAAAGAGATATCTGAATGTA
TAAAGTCATGGaggaggaggcgcaaccatggtttgcgcaaacggagaaaa
ttttcccatttttgtcCCCTTGTTTAGCTAAAAGAGATCTTTTTGAACGT
TACCGTTGACCGTTTCCACCATCCAGATAAATAGTTCGTTTGATTTAGAC
TGAAACTAAACAGGTATTGAAAGCCTGCAAAGAGAGCTCTGCAAGGGGAG
GACCACGGGaagtattttattttgaaaggcaAATGAGATATGAttcgagg
gccaaccatggtttggcccgaggaggcaaaatttgaaatttaaggtgCCA
GAAATGCTGAAAAACGCATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATCTAAATCATAGGT
TAATGGATTATTccgtaaaatgaaagaatttaacGATTGTTGATTTTTGA
TGAGTGCTGCATTCGAGACCTCGAGAAATTCTGCAAACTTAGCTTTCTTT
ACTTGTTACCCactattatgatttttttcataaagtgCACATTTCCCGTA
AAGAAGTCGTGCacacaattttaaaaagaggATGAGACAGGgtagctacc
aaaaatagctatATTATAGCTACAATTCTACTCGTCATAGCTACAATTCT
GCTCGTCATAGCTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCAACACCGAAACGCCGACGCAAAAAAGGGTCA
ATACCGACACACCgacaaacccgtacgcccccccccacGTGGTGATGACT
GTGACAGAGCTTGTTTTGCTGAGGTTTCTCTGAGGTGGGTGGGCCACTTG
AAAGAAAGTTTAGCGATTGAATTGCAACTTGTTTATCTTTCATTTTGATT
GAGTTTATTTCAAGTGGACCCCAAACCTTAAGGGGAGTGAAAATATAGAC
ATGACACGCAATTCTTCAGGAAAGAAAGACACACAGACAAAAAAGTATAA
GCTGCAAAAAAGTGCAATTtcatgttgctttttataaaaccttcgtcata
acttttcgaattcaacCATGAATGACCTACAGCTAAATAATTATTgactt
tgatgtttttaagaaaaattttcaagggggcgccaaaattttgttgatgt
ttaattgggcaatTTGGCGCACTCTCCGGCACGTTTATAGCGCCTTCTTT
CTATgagtacaatgttaattttaccctcttgcatcctttctcttgaattt
tttcaaaacttctatcaatattgaatcagaagtaagagaagtgttgtgta
tccaccaggggttaaagagaatgctcaccctcaaaatgagagattgccaa
aatgatcaaaacttgttgattctcgctgtggtttttgtggtcttatactg
actaactttctccgttTTAGAGGATCtgttaagctgtttgacctttctta
caccaaaattACAAGGAACCCTTCCTCCCAACTTCAGAATTTTTGGGGCT
TCTTTCAGCCAGTGATCTTTATaggagagtaaagtaagaccagcggcgca
aaagtttaaagattatcaggtaatttttctgataagagttttagaaagca
aaaatatagactaaatcgacttaccaggtataaaatttccatttcaaaga
ttagggacgttactttcaaccagtcactgctcttacagtttagtatttCC
ACTTAATGAttgagggcgcaaataaggacaaaaataccaagGGCGCCagt
ttcatagtttgcaccaccaaaaaaattaagccaggccgctactgataGAT
AGGGTCATATATATGTTATAAATGTACTAGGTACCTAtatgaaatgtttt
tatttgaatacGCTATTTGTCTATACTCTCTTCATCgatttaaaactttt
caaatctGAGTCTTAAGATATTTCTAGTGattcttgaatttttaaaagag
ccaagaaaaattctaaatatcACAGTAAGtataaggaaagaaaaattgaa
aaaaactgaGGCTCAGCATTATTTTAAACACTTAAAGTTTTGTATTTCTT
ATTAAAggagttcttaaaaaaaactttagtattttcttgtttttttttag
atacCTCAATGACTACAATATGAAATTCACTTCCCTCAAATTTCGAGTTG
CTTTGATTTTTATGGTGGTTTGTATTTTGATACAGTCGGCTCTCTCTGTG
TATGGTCCAGCTGTCTATGGTAAGTTGTTTACCNATGGTGGTTTGTATTT
TGATACAGTCGGCCCTCTCTGTGTATGGTCCAGCTGTCTATGGTAAGTTG
TTTACCGTGACCAATTAAATCTCGTCACTCCATAAcagggggggtttgta
ggggttcaaAATACCgctttcccgtcaaaatttttgctgaatcccggaat
cccgaaaatttaaaaaataataacaccgtcacaccggcttgtacagggca
aaaatgtacctaaataccgtcaccgtctgattttaaaataccgttttccc
gtctcttttttcgtcaaatcccttAATACCGTActtaaaaagggccaatc
ccgtcacacggTAAAAATACAAACCCCCGTAACctttacaaaaattttga
ctCAGAAGAATACGCGCACACAACTCAACTACGAATGAAACGCTAATCTG
GACTTTTTTTTATTCGGGTGCCCCTAGGTCCTTCTACCAATACGAGAAAG
TGTGTGTAATTAATGGTTTAAGGTATTTGTTATCATGGATTTAATTCTTT
CGAGTGTCTTAagaaatcaggcaaaattccttcgatatttcggaattctg
aaattaaTTTAATGAATAACCTGTGAAGTGTTTCAGTAGATATCAATGAT
TCAGTGCAGCCTCGGCTATACCAAGAGACTTAGATTAATTAAGGTAAAAG
GTATGAGACTCTTAAAACACAGTTAGTTTTAACTATCGGACAAACTTCTA
GCCCCATTGATgtttatggcgcgccaaaatggtttttaataccaactttt
cTTTCCTGATGCTATCTTTTTTCTTGATGtcaacttttttcaatattaac
ttttttttttcgataccAACCTTTTTTGTCTAGATTCCTCGATTTCATTA
TTTTGCAATGTAGGCAGAGGCTTATAACACGGATGCATACTACATCATTG
GTCGAAGTTAGATTTAACTGAAATTTGGAATTTGCTGATTTCggaaacaa
tagcagcaatatttttccCGATATTGAAGAGCTTGAAGCACTTGGAACGC
TTCCAAATATTGTTTGTAGCTACAAGATTTTGTGggagttttctttttta
ctcaactttttttgaaataaaaaatgccgATCTTATCGGATAGGAAAAAT
TAATCCAAACAGCTCTTGATGCTCCACGAATTCCACGCAAGCGCTTCCAC
ACCATCTCGCTCGTTCTTGTATTTTATTAAGGGTCCCTTTACACTTGAAT
AGTTACTCATCGAGGCAAAAGTTTGTATTGTACaatgttattgaaaaaaa
agttggcaTTGAAAGAAATGTTGGTAtcgaaaaaaaaagagttggtatcg
aaaaaaaaattcgtatCGAAAAAAGAAAGTtcgtattgaaaaaaaaagtt
ggtgtagaaaaaaaatgttggtatcgaaaaaaagttggtattaaaatAGA
TGTTGCCCACTTTGGAGTaaatacaatatttttataatgtcACAATGTTC
CTTCTTTTAGGTCCAGGCTACGGAGCATTAATGAACCTACCATTAAACTT
TATCGGAGCCGTAATTGTTGTAACATCGTATGTCATCTCAATTTTCAAGT
TGAAGGCGTACAACAAAGCCAGCAAAAAGCTAACATCCACAGACCGCTCA
TTGATCTTCCTGGCGAAATTTCATGTTATACTTTTGTCCGTATGTTACGC
GCCTGTGGTGATATATAATTGCTTGTATTGGCTAATTAAATTTGATGACA
CCACTGCCGCTATTTTTACCGCCGTCTTGTTCATGTTAGCTAGTCTACAT
TCGTGTCTGAACGCACTTATTTTCACCTTACGTAATACAAAAAATCGCAA
TAAGGCAAAAAGTCTTTGGAATACTTTACTGAAAAAAGAATGCGATGAAG
ACATAAGGGCGCCTGTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050780TCONS_00050780Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050780-proteinTCONS_00050780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_186supercontigscaffold_186:104103..109971 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.07	0.07	0	0	0	0.12	0.1	0	0	0.17	0	0	0	0