TCONS_00015163 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015163
Unique NameTCONS_00015163
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length386

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015163 ID=TCONS_00015163|Name=TCONS_00015163|organism=Clytia hemisphaerica|type=transcript|length=386bp
gccAAGAGTGAATTTTCGTCCATCTTGTATTTTGATCTGAATTATTCGTG
TCTTGATTACTCAAAAACATGCGCGTAACATCAAGGTAAATCCNactgat
acggcgccctattcataaacacaatcacgcaactttgttgtcatccccag
ttcttatagacgaacgcggtccttacgatttcgagattgcatttTCGTCA
GATCGTATATTTTCATCCAGTGGGTTCGACtgacaattcctgcattaaAA
GCCAAGATGCAATATGTTCATTAAATACACGCTCACAGTATCTCTAGTCa
gagaaaacaatcacacattCAAAGTGTCTTTAGtcaggaaaacaaccaaa
acacataccaaaacaatcacacaagtttcaaaaNTT
Run BLAST on NCBI

transcript from alignment at sc0000204:372756..373141

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015163 ID=TCONS_00015163|Name=TCONS_00015163|organism=Clytia hemisphaerica|type=transcript|length=386bp|location=Sequence derived from alignment at sc0000204:372756..373141 (Clytia hemisphaerica)
AANttttgaaacttgtgtgattgttttggtatgtgttttggttgttttcc
tgaCTAAAGACACTTTGaatgtgtgattgttttctctGACTAGAGATACT
GTGAGCGTGTATTTAATGAACATATTGCATCTTGGCTTttaatgcaggaa
ttgtcaGTCGAACCCACTGGATGAAAATATACGATCTGACGAaaatgcaa
tctcgaaatcgtaaggaccgcgttcgtctataagaactggggatgacaac
aaagttgcgtgattgtgtttatgaatagggcgccgtatcagtNGGATTTA
CCTTGATGTTACGCGCATGTTTTTGAGTAATCAAGACACGAATAATTCAG
ATCAAAATACAAGATGGACGAAAATTCACTCTTggc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008491XLOC_008491Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015163-exon-sc0000204-1491911889:372756..373141TCONS_00015163-exon-sc0000204-1491911889:372756..373141Clytia hemisphaericaexon
TCONS_00015163-exon-sc0000204-1510915933:372756..373141TCONS_00015163-exon-sc0000204-1510915933:372756..373141Clytia hemisphaericaexon
TCONS_00015163-exon-sc0000204-1575043694:372756..373141TCONS_00015163-exon-sc0000204-1575043694:372756..373141Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000204supercontigsc0000204:372756..373141 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.84744	10.9002	9.40176	3.22668	158.484	109.688	53.0134	47.4964	23.1001	35.9445	35.0633	34.5418	36.3972	31.4576	27.0566	28.675	35.4094	31.1396	45.0139	67.3252	31.949	28.8825	16.6048	24.4954	29.9453	37.6659	62.1053	47.2423	54.5875	47.9207
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015163 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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