XLOC_031252 (gene) - C. hemisphaerica

Overview
NameXLOC_031252
Unique NameXLOC_031252
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_154:287506..293035+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031252 ID=XLOC_031252|Name=XLOC_031252|organism=Clytia hemisphaerica|type=gene|length=5530bp|location=Sequence derived from alignment at scaffold_154:287506..293035+ (Clytia hemisphaerica)
ttgaaaatatttcagagTATCTTTAATAAGAcaaagaaaatataaacaac CATGTTGGCAAAAGCATTTTCCAGAAGATCACTAACCAAATGCTTTAAAA AGACAAACTTAGAATGTATCCGGACCCTGACCGGCCTCAAAACGCCAAGC CAATGTGTCATACAAACACCAAAAGATATGCCGAATTTGATAGATTGCCG TCAAGGAGAAAggtaatattttttatttcttttaatcATGTATACATATC CAAATCTGTAATGTTGCACTCCCTACGATATCCACTAAAATGAAATTCAG AAATTCCTGATAATGTAAAAGTCTGAAAGGTTAGATTGCAGACAGATGTA ACTCATCCCAAGCAAATAAATTGAAGTCAATTCTTCAGCTGTAACTTGAG ATTTCGTGCAGATTGATTGTTTCGTGTAATTCAATTTTGAAGCACGTTAT AATAGGAGTTTTCGATAAACGGGACTCCTAGACTTTCTCCAAGCCTTTTT TTAAGAACCCCCCTCACTACTGAAAGGAAATCTTAATGACCACCTACATT TTACAGTTTTTTAGGGCACCCTCTTCCCTGAATGGGAAAAAAGCAGTCTC CTCATTAATAATATAAAGATTCGAATTTGATGGAGCTGACAGTTTGTCAC TTTCTTTTCTAGGACACCAGGTCTGTTCACATCAGAAGAGATGGACTCAC GTTTATCAACCCTCCGTAATAAAATGTCTGAAATGGGAATGGATGCAGTT GTGTTTACCTCATATCACAATATTAATTATTACAGTCAATTTTTGTATTG TTATTTTGGAAGACCTTATGGTTTAGTTATCACTAAAGATAATATTTCAA CTATCTCTGCTGGTAAGAATTTTTCTTTAGTCATTGGCCTCGTTTCCATG CATAGCGCACCGTAGGGTAGTTAAACATTCTCATTCAAATTCCTGATGAA ACCCAAAAAGAAGGATTGCAGATACGACTCCTCCCCAGGGAAACATTTCT TGGCGCTTTTCCAGGTTCTTTCTGAAGTTTTTTCCAGGCGTACcggtaaa ttattttttttctgcgtATAAATGCATAGACAAGTTGCAAAAACCTTGAA ACTGACCATCTAACAAGTTGTGTACCTAACAGAGTGTTGGTCTTTAATAA GAAGGCTATCCTAAGGTACTAAATTTACACCTATAATATAAGCCTTGCAG AAATTTCCTTAGTTCCTTAGTAGCTAATCCAGTTGAGCTTTACTAGCTTT CAAGCAGGTACACGTTTGTACACTTTCGTCTTTATAGAATATATTATAAC TTTAACATTATTGACCGACAatcttaacctcgctaataatACGACGAGGT AAAATTAAATTTCGAAATTATACCCTTGACCGGGTCAAAGCCAAGACGTG AAAGATAGAACTGACTAGTAATGGCTAGGATTAGGTATGTAGAgataatt ttcctcaaaattgaTTCTATAGGTATCGATTATGGTCAACCTTGGAGGCG CGGTAATAACGCTGAGAGCGTCACATACACGGACTGGGAACGAGATAACT TCTTCAAAGCAGTCAAAGAACTTGTGGGTAACAACCAAAATGTTGGTTTG GAGTATGACCATTGTCATTTACAATActttgaaaaattccaaaaggCACT TCCTGAAGCGAAATTTGCAGATATTGGATTACCCACAATGAAATTAAGGA TGGTGAAATCGCCGGAAGAAATTGCTGTGATCAGAAATGGTAAGATAATT CTTGTTAGCAATTGGTGATCATTTTATGTCATTTGTTGGAATTTCTGCAA CCTACGCTATGAAGATGATTTGATCGGTCGGAAGACGATTCACAAAACTT AGAAACTTATTCATTACATCTATCCGAAGACACGTGTTTCGTTCTGCCAG GAATTATTTATTAGCAAATGAGAAACACAAACATTCGGAAAAGAGAGATA TACTGGTTGTCCCAAAAAACTTTACATAAATTTGAATGCTGATATCTTAA GCCAGCATATCTTAAGGACCTTTTAGGGTCTCTTAGGAATTAATCCTTAC ACGTTTGTGTGAAATTTCAGGAACATTTGATATGTCAATCAAGAAAAATA GGTCAGCGAGTATTGCAAGGCCTAATATCAAACCggcaaagaaatgaaaa aaattgacgtcaatttgtagttttttaatcttaatttttttgggacACCC GGTAGAATAGAAGATAGGAAATGAAATAGGTGACTTTATGAGATACAACA ATACAACATCTTCCAACATAAGTATACACTAAAAAACACCTGCTTAGTTG GCTCACTTTTCTTTGTTATAACAGGTGCACGAATCGCTGACCTTGGCGGA TATGCCGTGCGTGAAGCATTGGAGGAAGAAGTACCTGAACACGAAGTTGC TTTACATTCAACAAGGACAATGATCAGAGAGATTGCAAACACATATCCAC AGACAGATATTATGGACAGTAAGTTatcattcatgatattcatgatgtaa tgtttcCTACGGAAACaacccggtttttgccagtggtggcaaatttaaac tagacaaaaatcGTTCAAAACTTGCCACTaatggcaaaaaccggggtctt tccgtaaaCAACATTAAGTcacgaatatcatgaattctaaGATTcttaaa ttcatgatattcataacgttatcttttatacggaaacacccgaaaatcac cgggcgtttgccactagttttgaatttttacattGAAACTGGTGGTGAac cataggcgtagcgagataccctgcaaaatttatggatgagagtgGTTTTT ACGACAATATAATTATTGTCTTtgatttatcaaaagataatgaatatgtc ataaaacGTCTGCattccctcataaattttgcagggtatctcgctacgcc tatgaacGCCCTGTGTTTTTCGTGTAATTCCGtgtaaaagattacgtcat gaatatcaagaatatacACCTGTCTACACGGGCGTTATTTTAAGAGTTTT CGCTAGCTGAGCTAAAAAAATAAGGAGAGACTGGTTCGAGTTTGACGTTA CTCAAGGAAGTTTCCCGTACTTAATGACACAAATTTCAtccacaaaacaa aaacaattaagaAAACTATGTACAGGTCCATAAGGGAAatatttctccaa tcttgtgtTAAACAAAGTGTAACTAAATAACCCAGTACATATTCTTTCTG TTATTTCTCAGAAAGGGAGCTGATTGAGGGTAAAATGAGGTGACACAGAG TCAGTTGCTCAAAATTCCttgtgcaaaacaaatcaaaatgggtgcaAGTC AAAAAAGATACAGTTatatcagatttttactgtcaaacTGCAATTCAGCA GTCCCTAAAACCCGCCCTTACAGTGTATTAAGTTAAAAACAGACCCTTGT AGTGCagtctatcaaaagtacacccttacagtgcatttcgagggtctcga aaaacctacccttaagggcggcgcatgccgtgggtcggaccatatgagtg cccccctccCGGAGTCTACTCTGACCCTGTCTAAAGAATAATCTTCTGAT TCTCATATAGCTTGGACATGGTTTCAATCAGGTATAAACACAGACGGAGC TCACAATCCAGTCACCACAAGAAAAGTCAACAGTGGAGATATTCTCAGTC TAAACTGCTTCCCAATGATACAAGGGTGAGTGCACAAAGACTTTTAAATG GTTTTTTGGTAGTCACTAGTTAATCTCTGAGTAGATCTTTTGCAGGGTTA ACGTCCCTATAAGTACAGTGAACTTCCTCTAATTCGAACATCTACAATTC GAACGTTTCGTTATTCGTATTAAAAAAGCGGCCCCTTCAGCTGGAAAGTC GTATAAAATAATtactgtaattcgaatcttctctaattcgaataagaTTT TCTGTCccttttaaaagtcaaattagTGAGAGTGGACTGTATTGCTCATC AAAAATAATGTGTTTTTaagaaattgtttaaaaaatccACTTACCTTATT AAGCTATGTGGTGATAAAGATTTGCTTTGTGACATAATTCTCAGAATGTA CGATTTCGAATGGTATCTGAAAACCAGAAGTAGATGATATCAATTAGAAT AATGTTAATGTCATTTTTACAGTTGAAAGAACACTAAAAATCTTTGAATC TAAAATCAAGAACCTAATTCTCACCCATTATAAACctgtttttgatttat ttttgaagagGTCTCCCAGCGGCACTACTCACCGCcatcatatcaatttt tttgcagTCATCACGATTACAAAAACCACTAGAATTTATCATCGCACAAA AAAATAGCAACAAAATAGTCCAATCACACATCACACCTCCAATTTTTAGC CCTCCTCATGCctaaatcttgatcacgccaccacacctaaaaattttgga tttacGCTATTCCCTAAAAAAATACCAATCAGGCAAATGGCCTGGTGGTC TCTTTGAATTATGTGGAAAGCCTCCTTATCCCAAATTATACTAATTcatg ttttaaagttttgctaCATTACACCTATTTTGAGAACTTAAAAATTCCTT CATTTTCAGGAAGGGGCGGCTTAACCTTACTTTTAGGCTATCGAAAAGGA GCCCATGAACAAACCTAAAACGAAAAATACATGACGTTCAAATTTGTCAT TTTAGATACTACACAGCGCTTGAGCGTACGTTATTTTTGAACCACGCGTC AGACGCGCACATCAAAGTCTGGGAAGCAAACGTTGAAGTCCACGAACGCG GGCTAGAACTTATCAAGCCTGGAGTCAAATGCTCTGAAATTGCACATGAG CTAAACGAAATCTTCAAGAAACATGATCTTTTGAAATACCGTACATTTGG ATATGGTCATTCTTTTGGAAGTTTGTGTCATTATTATGGAAGAGAGGCTG GCCTCGAATTGAGAGAAGACATTGAGACAGTCATAGAACCAAATATGGTA ATCTCTATGGAGCCAATGGTAACAATTCCAGAAGGTTTGCCAGGAGCTGG TGGTTACAGAGAACATGATATTACAGTTGTTACTGAAGACGGTAATGAGA ACATAACTAAATATCCATATGGACCTGAACATAATATAATCAGAAAATAA GTCTAGTGTTCAATATTGTTGAATGATATATTGTgaattttaactttatt ttatGCACTTTCAAAGTCGCAGTGAGTTTCTTCATACTCCGTCGTTCTAC GAAGGGGACTTGTACTGTAATGAAATTGACTTGGTTAAAAGATTTACCTa accattaaaaaaaaacaattaagacATTGGCTGTCACATTTCCCAATTCT GCAGATTCAAAAGAAATTGCgcattttttgtttatgtttatgtttataaC TTCAATTATGTACTATATTATATTATAAGCTCTATGAGCCTTacattttc taataaaaatgatatgatttaaaaaataattaaaaaatctaCATCTACAT TTTAAACTTTAtaaatttctatcaaattttattcaatttGACATGTTTAA GGTTGAATTTAGTTTTTACCTTGTTCATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049218TCONS_00049218Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049218-proteinTCONS_00049218-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:287506..293035 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0.09 0.53 0.42 0.06 0.05 7.22 6.52 6.32 6.05 4.24 4.32 0.22 1.47 27.83 1.37 50.96 2.35 0.31 0.27 196.15 206.91 29.49 48.74 39.82 18.31 22.9 15.96 26.81 9.98