XLOC_030674 (gene) - C. hemisphaerica

Overview
NameXLOC_030674
Unique NameXLOC_030674
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_141:208116..211613-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030674 ID=XLOC_030674|Name=XLOC_030674|organism=Clytia hemisphaerica|type=gene|length=3498bp|location=Sequence derived from alignment at scaffold_141:208116..211613- (Clytia hemisphaerica)
CATCCGTTGTTATGACAACAAGAAAGAGAGTGAGTTGGGATTGTGTAAAC
AATGGAAAGAACACGGGGCATGTACCAAACACACCAATTTAATGAAACGG
TTCTGTAGAGCAACGTGCGACATGTGTGGTAAGCCTTATTCGGNNNNNNN
NNNNNTTGTGTAAACAATGGAAAGAACACGGGGCATGTACCAAACACACC
AATTTAATGAAACGGTTCTGTAGAGCAACGTGCGACATGTGTGGTAAGCC
TTACTATTTGCTTTATTCGGGAAATAGTTCATACCCCTATGTTGAGGAGG
TGTGACGTACAGGGTAGTATGGAAAGTAAAAATTCCAGGGGGTCAGGTTT
TTTGCTTTTTTGTGTAAAAATTAACAATGGTCAATAAAATGAGGTTGAAA
ACATTTTCTGGAATAACGCAATTTTTCTGATATTGTCCAAATAAAAACTA
GATTTCAAGCAAACGAAATTTGCCGAATCATCAAATTTTTGCAACTTACT
ATATTTGTCTTTTGTCTTTTTTCTATTCACTAGACGTGAAAGCATTGCCA
GCTGCTTGCATGGAATCCAAGTTCGGATGTTGTCCTGGTAACAAAATACA
AGCTTTAGGTCCTCGAAATAAAGGCTGTTTTAATGGTAAGTCAGCAATAT
CCATTTCGATCCCATTAATTTCCCATAATGCTTCTTGTTCTTTTTGTGAA
ACCATAATTGGCACAAAAATAAAAACTTTTTAGAAAAGCAAATTATACCA
AACTCTTGCGTTATCTGATTTTCAGATGGGGGATTGGCGGCCGCCAAGGC
AAAAGCCCTGGTTGGACCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCA
ATCTCTAACCTTTCTCAGGCAAGAAAAATTGAAGCCTTAAAATAGGCGCC
GTATTTTTGATGACGGATTGAATCTTGCAATTCCTTTGTCTTCGAGTGAT
ATATTTTTCGAAATTAAGCGGTAAATTTTAGTTTCAATCTGTCATTTGTG
TAAAAACCAGGCGGGTCGCTCAAGGCCGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCAGTCTGTCATTTGTGTAAAAACCAGACGG
GTCGCTCAAGGCCGCGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTA
CCAAAGAGATTGACCTCTAGCTCTTCGGGCTTGAAACTCAATGGGTTGGA
CCTGCCAATCCCCAACAACGAGGGCTGGGTTATCAGGCCTCCCGCACTGA
TTTATAAAGTCCGAAGGGCTAAATGTCATACTTTAAGCCATCGCAGGCAA
AAAAAGTGAATATCGCAAGAAGAATTTTTTCCATTGTTTCCGGAAATCCT
CGAAGCTTCTGATTGGTCAAGCATTGAAATTCTATTATAATGTCGTGTGA
CGGAGGTAGAATTTCCTACCTAACCACGGCGGCACACTTTTCAGCCAAAG
CACGACATCTAGCCCATCGGGCTTTCTAATCTGTACCTCCCGATGAAAAA
TCCTTGACGCGGTCTCGCAAAATTCCGTAATGTAAACCTTCCAGATGTTG
AAAATTTTCCCGACATTCAGAGCTTTAGCGTGTTGGAATTAAAATTTCTG
CATCTGAGTGCCAGATAAACTCTGGCGTGGAGCCTGATGAGTTGCACGGA
AATATGTATGCAAAGAAAAATATTTTCATTCACCTTCTTGCTTGTTTGCA
TACGACAGGTTGCCGAGATGGTCGCTTGTGCCCATTCTTCCCAAACTTCT
GTGGTGATGAAGCCAATAAAGAAACAATGAAGAAATTTTGTCCTTACACA
TGTCGATATTGCGGTGAGTATGATAGATCCCAACTACTCTGGAAAGAGAA
AGAAAACTTACAATAATAGATAATCTATAGAGAGCCAAGATATTACTGAA
TACCCGAATGAATACCCTTGCAATGTTTTATGAATGTTCTTAAATATTGA
AGGCTTCGAAACCTCGTGTTGTTTTTGTAGAGCCAAAACATGCATTTGAT
GTCATATCGATATCAATAGCAATACCTACCATAACGATTTAGCCCCCGGG
GAGGGGAGGGTACTTAGGCAAATTGAGGGTACGGTATGTGTCGCCCTTAA
GGGTACCTTTTGTGGATTTCCAAAGTCCCGCTAAAAGTCGGAAAAATCAG
AAAATCAAATTTCAGTCCCACCAAGGGTCGTAGAAATAGGAAGACTTCAA
CTTTTTAACCCCCGGAAAGATAAAAACTTGGTCAAATTTGTCCCAATAAG
GTTCGTAAAATTTACAAAATTTTCCTTTGTTTTCTCTTTTTTAGTCCCGG
CAAGGGTCCAAGGGTCGAAAGTCGGGCGGCACCCCCCGTCAGCTAGCCCT
AGTACCACCCCCCCCGGGATTTATCTAAACTGAGCCCGACCCCGATTTGA
ACCTAACAACTCAATTTCTAATTCCGTTGTACACTTCCTTTCCGGTCATA
ATTTATATTGGAAATTTATTCCTCTGTTATAGTACCTGAAGGCAACGAGC
GTGTGGAGATTCTAACCGAAGATAACTTGTAAAAGAGCAATTATAAAAAA
TCATACAAAGAGACACGTTGGTTTGCTGGCTTAACCAACAATGATTACCC
GTCTACCATCTTTAAAGGGAGATGGTTCTTCTTAAAGGAATACTTCGAAA
CAACCAAAACTAAATAAAGCTTTTTATTTCAAGTGAAGGGATATAGTGTT
AATTATAAAAACTTTCTGAAACAGGAAAAGACTTTTTAAGATTTTAATTG
AGGTATGGCTTTAGAAATCCTTTCATATCTCAAGCATCACATTGAAATAC
AACTTGAAATTTTGCACAAAGACAGTCTGATAGTTTCTCTAGTATAAAAA
CTTTTATAATTCAATGCCAATCATTTTTGGAAATTTGTATTTAAAAATGC
TGTTTCCATTTTAGCGAGATCGTATGTTATCTCAAAGTATAGCTTTAAGG
AGAACATTCTCCCTTTAAGGAAAAGCAGCTAAGAAAATAATTGACAGCTC
ATGTTATGTTACAGCTAGCTTGCTTATATCACTTTCCAATTGAGAACACA
TCTTTTCCACAGAATTTTTAGAAGTCGAAACAATTTGCTTTGGAGAACTT
TGATCTGGTGTAGAAAATGCTGTAGTCGTGAAAATTCATGACTGTGTAAT
GTTATACAGCACGAAGATTTGGATAAAAAATAGAAGAGCTACAATTTAAT
ACAAAACAAATCGATATCAAGTAAAATAGGTAGCTTTGATATATTTTGTA
AATAATGATTTTATATAATTTTACCAAAAAAAAGTTGTTACAAAGTCAGT
ACAATAGTGAGAAAATCCGATTTTTACGGACAAAAAAAATTTTTCCGGGC
ATTGCAATTTTGTATCATTGTGCAAAAACTTAGATAAAACTGATGAGCAA
ATCCCAAGAGAAAAGCTGGTAACAGCAGACGAACGGACAAACACCGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048193TCONS_00048193Clytia hemisphaericatranscript
TCONS_00048192TCONS_00048192Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048193-proteinTCONS_00048193-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_141supercontigscaffold_141:208116..211613 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.08	0.09	0.05	1.41	0.76	2.49	3.02	1.01	1.84	1.1	0.61	1.08	1.39	0.02	0.09	0.03	0	0.04	0.15	0.13	0.2	0.14	0.13	0.52	0.89	0.22	0.2	0.11	0.05