TCONS_00014838 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014838
Unique NameTCONS_00014838
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length350

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014838 ID=TCONS_00014838|Name=TCONS_00014838|organism=Clytia hemisphaerica|type=transcript|length=350bp
CTTCAAGTCAAATTTGCTCTATTTTAAAGTTACGAAAATTTcacatacac
ccctgtatcagtgacccggtcagatTCGACCCGGAGTAAAAATCGAGTGA
AGAACAATGGAAATCTCAACCCGGGCAAAAAACGAGAACTTTATCAAAAA
ACCCGACGAAATCTTATTTTTCTAAAGTGCTAAATAGCGTAAACCCAGGG
AAAATCCGGACTTTTTGTCTTTGCCCGGTATTAGAATATTGCCTATTATT
TTGACCCAGTGACTGAAATATCTACCCTGGTGGATATTACTCATATCAAA
GTCACCCCAGTGAACTTTTAAGACTCACcgggttactgagacaggggtgt
Run BLAST on NCBI

transcript from alignment at sc0000198:423821..424170

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014838 ID=TCONS_00014838|Name=TCONS_00014838|organism=Clytia hemisphaerica|type=transcript|length=350bp|location=Sequence derived from alignment at sc0000198:423821..424170 (Clytia hemisphaerica)
acacccctgtctcagtaacccgGTGAGTCTTAAAAGTTCACTGGGGTGAC
TTTGATATGAGTAATATCCACCAGGGTAGATATTTCAGTCACTGGGTCAA
AATAATAGGCAATATTCTAATACCGGGCAAAGACAAAAAGTCCGGATTTT
CCCTGGGTTTACGCTATTTAGCACTTTAGAAAAATAAGATTTCGTCGGGT
TTTTTGATAAAGTTCTCGTTTTTTGCCCGGGTTGAGATTTCCATTGTTCT
TCACTCGATTTTTACTCCGGGTCGAatctgaccgggtcactgatacaggg
gtgtatgtgAAATTTTCGTAACTTTAAAATAGAGCAAATTTGACTTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008308XLOC_008308Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014838-exon-sc0000198-1491911889:423821..424170TCONS_00014838-exon-sc0000198-1491911889:423821..424170Clytia hemisphaericaexon
TCONS_00014838-exon-sc0000198-1510915933:423821..424170TCONS_00014838-exon-sc0000198-1510915933:423821..424170Clytia hemisphaericaexon
TCONS_00014838-exon-sc0000198-1575043694:423821..424170TCONS_00014838-exon-sc0000198-1575043694:423821..424170Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:423821..424170 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.339317	0	2.58792	2.11994	3.81656	3.15162	1.52952	3.51906	2.67746	2.433	3.85763	1.37994	0.566659	0.774409	0.534944	1.67934	0.243275	0	0	0.262285	1.08059	0	6.21025	6.99595	0.279273	0.284535
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014838 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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