TCONS_00014655 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014655
Unique NameTCONS_00014655
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length262

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014655 ID=TCONS_00014655|Name=TCONS_00014655|organism=Clytia hemisphaerica|type=transcript|length=262bp
GGAACGATACGTTGTAAAAGAAGTTTGTTGAAGATTTTGGCGGCGATAGG
CATAAGTGTGATGCCTCTGTAGTTGGATGCTATGGTCAAATCACCCTTTT
TTGGAACAGGAATGATACCGCCAGTTAACCAAGCAGAAGGGGGAGTTAGA
AATTCAAATGTGTGATTACAAAAATCGAGAAGCATTTCCATAAAGACGGG
ATCTTTCCAAAGCAGAGTTGGAATATCATCAAGGCCTgaagatttattat
ttgaaaaaagtt
Run BLAST on NCBI

transcript from alignment at sc0000191:78084..78345

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014655 ID=TCONS_00014655|Name=TCONS_00014655|organism=Clytia hemisphaerica|type=transcript|length=262bp|location=Sequence derived from alignment at sc0000191:78084..78345 (Clytia hemisphaerica)
aacttttttcaaataataaatcttcAGGCCTTGATGATATTCCAACTCTG
CTTTGGAAAGATCCCGTCTTTATGGAAATGCTTCTCGATTTTTGTAATCA
CACATTTGAATTTCTAACTCCCCCTTCTGCTTGGTTAACTGGCGGTATCA
TTCCTGTTCCAAAAAAGGGTGATTTGACCATAGCATCCAACTACAGAGGC
ATCACACTTATGCCTATCGCCGCCAAAATCTTCAACAAACTTCTTTTACA
ACGTATCGTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008201XLOC_008201Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014655-exon-sc0000191-1491911889:78084..78345TCONS_00014655-exon-sc0000191-1491911889:78084..78345Clytia hemisphaericaexon
TCONS_00014655-exon-sc0000191-1510915933:78084..78345TCONS_00014655-exon-sc0000191-1510915933:78084..78345Clytia hemisphaericaexon
TCONS_00014655-exon-sc0000191-1575043694:78084..78345TCONS_00014655-exon-sc0000191-1575043694:78084..78345Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:78084..78345 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.47114	2.8689	7.22491	4.26395	1.71803	0.465314	3.87847	4.4305	3.37123	1.32977	6.88473	4.05886	2.0505	2.63973	5.38702	3.52775	1.07828	2.34209	0	1.79304	5.50925	6.29199	5.56385	0.475562	2.05172	2.23864	2.106	2.54288	6.82109	2.98522
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014655 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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