|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014466 ID=TCONS_00014466|Name=TCONS_00014466|organism=Clytia hemisphaerica|type=transcript|length=921bp
GAAACATTGAATCTTCTAGTTACTCCGCATAGAGGTGATGACTTTGAGGC
AGAGATagcttttagaaatttaaatcATTTGCATAGCGTACCATTTACAG
TGGAAGGTTATGAGCCATCTCATCTTTTATTTCCAACTCTGATGCAAAAA
TATCTCACAGGAAGTCGAGCTGAATATCTTTACACATATCAGTCAGACTA
TGATTATCTGTATGAAATAGGCCCTGGTTTGGTTTATGATTTTCGTGAAA
AACAACACGTTGACCCGCCTGGAAGTTTTTATTGGAAAGCGACAGAGAAT
CCTGGTTTCTATACTATCGAAGATGAGAATGGGAGATTTTTGTACTCGCA
TATTGTCCAACAGAAACTAGCTCCCTTGTTTCTAACGGGTCAAGAACCTC
ATATCAAACACAAATATAATTTTGAAGATACTTCCAGAAGCAACGCTACA
ATTAGTTATTCCAACAAAGATTTTGTGATTGGATTACGATTAGCTGAATG
GCCTAAAGAAATATTGCAGGCGTTTCCAATACCAGATGCTATGGTCAAAC
TTAAGAATATACCATTGTTCTTAATTGCAAAGAGCTTCCCTGAAAGCCCT
CTTTCTTGCTAAACTCGAGTGGAGGATTTCATTTTCGTTAGTCGAGTTAG
AAATCCTGCTCGATTTACCGTATTATCAACGAAAagcatttttacatttg
aaaCATTCTCTAGTTAAAGTTGGGAATATTCAATCGTATCTTTTAAAAAC
CGTATTGATGACCATGTCAGCCAGATACGATCTAGACCAGTCTTCAACAG
AAAACAGCGATATCCAGAACTTTCATAAAAAGCTCTGTGAAAACCTAAAG
AAAGCCATAGATGAAGAATATTTGTCAAACTATTTTATTCCCGGGCAAAA
TTTGTGTCAGCTGATTGATAA Run BLAST on NCBI protein sequence of TCONS_00014466-protein >TCONS_00014466-protein ID=TCONS_00014466-protein|Name=TCONS_00014466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
ETLNLLVTPHRGDDFEAEIAFRNLNHLHSVPFTVEGYEPSHLLFPTLMQK
YLTGSRAEYLYTYQSDYDYLYEIGPGLVYDFREKQHVDPPGSFYWKATEN
PGFYTIEDENGRFLYSHIVQQKLAPLFLTGQEPHIKHKYNFEDTSRSNAT
ISYSNKDFVIGLRLAEWPKEILQAFPIPDAMVKLKNIPLFLIAKSFPESP
LSC Run BLAST on NCBI transcript from alignment at sc0000187:404251..405171 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014466 ID=TCONS_00014466|Name=TCONS_00014466|organism=Clytia hemisphaerica|type=transcript|length=921bp|location=Sequence derived from alignment at sc0000187:404251..405171 (Clytia hemisphaerica)
TTATCAATCAGCTGACACAAATTTTGCCCGGGAATAAAATAGTTTGACAA
ATATTCTTCATCTATGGCTTTCTTTAGGTTTTCACAGAGCTTTTTATGAA
AGTTCTGGATATCGCTGTTTTCTGTTGAAGACTGGTCTAGATCGTATCTG
GCTGACATGGTCATCAATACGGTTTTTAAAAGATACGATTGAATATTCCC
AACTTTAACTAGAGAATGtttcaaatgtaaaaatgctTTTCGTTGATAAT
ACGGTAAATCGAGCAGGATTTCTAACTCGACTAACGAAAATGAAATCCTC
CACTCGAGTTTAGCAAGAAAGAGGGCTTTCAGGGAAGCTCTTTGCAATTA
AGAACAATGGTATATTCTTAAGTTTGACCATAGCATCTGGTATTGGAAAC
GCCTGCAATATTTCTTTAGGCCATTCAGCTAATCGTAATCCAATCACAAA
ATCTTTGTTGGAATAACTAATTGTAGCGTTGCTTCTGGAAGTATCTTCAA
AATTATATTTGTGTTTGATATGAGGTTCTTGACCCGTTAGAAACAAGGGA
GCTAGTTTCTGTTGGACAATATGCGAGTACAAAAATCTCCCATTCTCATC
TTCGATAGTATAGAAACCAGGATTCTCTGTCGCTTTCCAATAAAAACTTC
CAGGCGGGTCAACGTGTTGTTTTTCACGAAAATCATAAACCAAACCAGGG
CCTATTTCATACAGATAATCATAGTCTGACTGATATGTGTAAAGATATTC
AGCTCGACTTCCTGTGAGATATTTTTGCATCAGAGTTGGAAATAAAAGAT
GAGATGGCTCATAACCTTCCACTGTAAATGGTACGCTATGCAAATgattt
aaatttctaaaagctATCTCTGCCTCAAAGTCATCACCTCTATGCGGAGT
AACTAGAAGATTCAATGTTTC Coding sequence (CDS) from alignment at sc0000187:404251..405171 >TCONS_00014466 ID=TCONS_00014466|Name=TCONS_00014466|organism=Clytia hemisphaerica|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000187:404251..405171 (Clytia hemisphaerica)
TTAGCAAGAAAGAGGGCTTTCAGGGAAGCTCTTTGCAATTAAGAACAATG
GTATATTCTTAAGTTTGACCATAGCATCTGGTATTGGAAACGCCTGCAAT
ATTTCTTTAGGCCATTCAGCTAATCGTAATCCAATCACAAAATCTTTGTT
GGAATAACTAATTGTAGCGTTGCTTCTGGAAGTATCTTCAAAATTATATT
TGTGTTTGATATGAGGTTCTTGACCCGTTAGAAACAAGGGAGCTAGTTTC
TGTTGGACAATATGCGAGTACAAAAATCTCCCATTCTCATCTTCGATAGT
ATAGAAACCAGGATTCTCTGTCGCTTTCCAATAAAAACTTCCAGGCGGGT
CAACGTGTTGTTTTTCACGAAAATCATAAACCAAACCAGGGCCTATTTCA
TACAGATAATCATAGTCTGACTGATATGTGTAAAGATATTCAGCTCGACT
TCCTGTGAGATATTTTTGCATCAGAGTTGGAAATAAAAGATGAGATGGCT
CATAACCTTCCACTGTAAATGGTACGCTATGCAAATgatttaaatttcta
aaagctATCTCTGCCTCAAAGTCATCACCTCTATGCGGAGTAACTAGAAG
ATTCAATGTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014466-exon-sc0000187-1491911889:404251..405171 | TCONS_00014466-exon-sc0000187-1491911889:404251..405171 | Clytia hemisphaerica | exon |
| TCONS_00014466-exon-sc0000187-1510915933:404251..405171 | TCONS_00014466-exon-sc0000187-1510915933:404251..405171 | Clytia hemisphaerica | exon |
| TCONS_00014466-exon-sc0000187-1575043694:404251..405171 | TCONS_00014466-exon-sc0000187-1575043694:404251..405171 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:404251..405171 . |
Blast
The following BLAST results are available for this feature:
|
