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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014282 ID=TCONS_00014282|Name=TCONS_00014282|organism=Clytia hemisphaerica|type=transcript|length=2584bp
tcgaattacaaaatgattcgaatgtttttgttcgatttcgattttgaaca
aaaaataaaatcaaaaaaccattttcagtTTCTGTTTTATTGGAAGGAGA
GAGTtattcatcaaattttgaaattatggcATCAATCACTGAAGAAAAAC
TGTCTCCAGATGTTGACAGAACTTTTACGAAAGAAAACCATTCAATGTCT
CCTGAATCGGTAAAGgacaatattgaaatcaaaaGTGATGCTGTTTTAGA
TGAAATTGCTGCCAAAGTTGATGCTTtggattttaacaaaaaaagcgACG
GagaagatgatgatgattttatAACCGAAACCGAGACTGAAGTTCAAACC
ATTAATAGACAATCAGAAATCATTAAGAAACAAGCTGAAACTATCAATAC
ATTGATTCAGCAATTGCGTGTCATGTTTGATGAATATAATGCTGCTTGCC
AAGAGAAAGAATATTATGAAGATTTGAGTGAAGCTTTATTTCGTTACATC
GAGATTTGTGAAGGTAATATCGGTATTCAAGAAGAAGTTTGTACTCAAAG
TGGAGAggatgaaaatatttcaaatctaaTCACCAAAGATCAAGATGAAA
CGACCACCGAAAGTGGTGATGGTGCTACGGATCCAAAACCGACCCCAGAT
CGAGTCGAAAAACAAGCCGAACCCACTACAACAGACCAAGACCAACCAAC
TGAATCTATGGCGGTTGATGATTCAGAAACAACCGCCCCACCACCACCTC
CACCCAAACAACGTATTTCTAACAAcgagttaatccgattaaatcACATC
CTATTGAAAGAATTGATCGAGTTACGGAATGAGCGTGATATGTTAcgaga
aaatgttttcttttctggAGATGATGCCAGCGAATCTTCAGATGCGTTAA
CTGAAGAAGAAGATCATGCTTGTGAACATTGTTCTGAAACTGATCTATCT
GCTTCTTCAATGTCAAAGAAAATAGATAATGGTGATGATGATTACGAACA
TaatgatgataatgatgatatgaagaaaatcgaaaatgaaTCTGAAGAAG
ACACTGAGTAAAGACAATctttatttttgtcttcttgAATTAGAGTCTTG
TTTCCACACTGGATGGAGATCTTAGACATCATCTCTACAGGGTTAACTAG
GGGTTAGAATGGGGTTATACTTTCAGGCTTACGTATAGGTTATTTCAAGA
AAACTGAAGGGAATCGTGTCAAATTATCTCTTAACAATGTTTATCCNCCA
GATGTTGACAGAACTTTTACGAAAGAAAACCATTCAATGTCTCCTGAATC
GGTAAAGgacaatattgaaatcaaaaGTGATGCTGTTTTGGATGAAATTG
CTGCCAAAGTTGATGCTttagattttaacaaaaaaagcgACGGagaagat
gatgatgattttattACCGAAACCGAGACTGAAGTTCAAACGATTAATAG
ACAATCAGAAATCATTAAGAAACAAGCTGAAACTATCAATACATTGATTC
AACAATTGCGTGTCATGTTTGATGAATATAATGCTGCTTGCCAAGAGAAA
GAATATTATGAAGATTTGAGTGAAGCTTTATTTCGTTACATCGAGATTTG
TGAAGGTAATATCGTTATTCAAGAAGAAGTTTGTACTCAAAGTGGAGatg
atgaaaatatttcaaatctaaTCACCAAAGATCAAGATGAAACGACCACC
GAAAGTGGTGATGGTGCTACGGCTCCAAAACCGACCCCAGATCGAGTCGA
AAAACAAGCCGAACCCACTACAACAGACCAAGACCAACCAACTGAATCTA
TGGCGGTTGATGATTCTGAAACAACCgccccaccaccaccaccacccaAA
CAACGTATTTCTAACAAcgagttaatccgattaaatcACATCCTATTGAA
AGAATTGATCGAGTTACGAAATGAGCGTGATATGTTAcgagaaaatgttt
tcttttctggAGATGATGCCAGCGAATCTTCAGATGCGTTAACTGAAGAA
GAAGATCATGCTTGTGAACATTGTTCTGAAACTGATCTATCTGCTTCTTC
AATGTCAAAGAAAATAGATAATGGTGATGATGATTACGAACATaatgatg
ataatgatgatatgaagaaaatcgaaaatgaaTCTGAAGAAGACACTGAG
TAAAGACAATctttatttttgtcttcttgAATTAGAGTCTTGTTTCCACA
CTGGATGGAGATCTTAGACATCATCTCTACAGGGTTAACTAGGGGTTAGA
ATGGGGTTATACTTTCAGGCTTACGTATAGGTTATTTCAAGAAAACTGAA
GGGAATCGTGTCAAATTATcttttaacaatgtttatcCAGAGCTGTTTAT
AGTCAGCAAAATATGTTGCTATCAGTTAAAAACTGCTCTTTAGAAAGCCC
ATATCAACAAGCCTACGGGGTTATATCCTTATGGGATTGTCCAAATTTTA
GCATatttatgtttaaaaaattcatttaaaaatgtaaatagaATAATTTC
GTATGAGTTCGTACATtccaaattaaattatttttgaaaattttgatatc
ttgTAAAGtagttaaaattttgattattctggaa Run BLAST on NCBI transcript from alignment at sc0000185:178806..181389+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014282 ID=TCONS_00014282|Name=TCONS_00014282|organism=Clytia hemisphaerica|type=transcript|length=2584bp|location=Sequence derived from alignment at sc0000185:178806..181389+ (Clytia hemisphaerica)
tcgaattacaaaatgattcgaatgtttttgttcgatttcgattttgaaca
aaaaataaaatcaaaaaaccattttcagtTTCTGTTTTATTGGAAGGAGA
GAGTtattcatcaaattttgaaattatggcATCAATCACTGAAGAAAAAC
TGTCTCCAGATGTTGACAGAACTTTTACGAAAGAAAACCATTCAATGTCT
CCTGAATCGGTAAAGgacaatattgaaatcaaaaGTGATGCTGTTTTAGA
TGAAATTGCTGCCAAAGTTGATGCTTtggattttaacaaaaaaagcgACG
GagaagatgatgatgattttatAACCGAAACCGAGACTGAAGTTCAAACC
ATTAATAGACAATCAGAAATCATTAAGAAACAAGCTGAAACTATCAATAC
ATTGATTCAGCAATTGCGTGTCATGTTTGATGAATATAATGCTGCTTGCC
AAGAGAAAGAATATTATGAAGATTTGAGTGAAGCTTTATTTCGTTACATC
GAGATTTGTGAAGGTAATATCGGTATTCAAGAAGAAGTTTGTACTCAAAG
TGGAGAggatgaaaatatttcaaatctaaTCACCAAAGATCAAGATGAAA
CGACCACCGAAAGTGGTGATGGTGCTACGGATCCAAAACCGACCCCAGAT
CGAGTCGAAAAACAAGCCGAACCCACTACAACAGACCAAGACCAACCAAC
TGAATCTATGGCGGTTGATGATTCAGAAACAACCGCCCCACCACCACCTC
CACCCAAACAACGTATTTCTAACAAcgagttaatccgattaaatcACATC
CTATTGAAAGAATTGATCGAGTTACGGAATGAGCGTGATATGTTAcgaga
aaatgttttcttttctggAGATGATGCCAGCGAATCTTCAGATGCGTTAA
CTGAAGAAGAAGATCATGCTTGTGAACATTGTTCTGAAACTGATCTATCT
GCTTCTTCAATGTCAAAGAAAATAGATAATGGTGATGATGATTACGAACA
TaatgatgataatgatgatatgaagaaaatcgaaaatgaaTCTGAAGAAG
ACACTGAGTAAAGACAATctttatttttgtcttcttgAATTAGAGTCTTG
TTTCCACACTGGATGGAGATCTTAGACATCATCTCTACAGGGTTAACTAG
GGGTTAGAATGGGGTTATACTTTCAGGCTTACGTATAGGTTATTTCAAGA
AAACTGAAGGGAATCGTGTCAAATTATCTCTTAACAATGTTTATCCNCCA
GATGTTGACAGAACTTTTACGAAAGAAAACCATTCAATGTCTCCTGAATC
GGTAAAGgacaatattgaaatcaaaaGTGATGCTGTTTTGGATGAAATTG
CTGCCAAAGTTGATGCTttagattttaacaaaaaaagcgACGGagaagat
gatgatgattttattACCGAAACCGAGACTGAAGTTCAAACGATTAATAG
ACAATCAGAAATCATTAAGAAACAAGCTGAAACTATCAATACATTGATTC
AACAATTGCGTGTCATGTTTGATGAATATAATGCTGCTTGCCAAGAGAAA
GAATATTATGAAGATTTGAGTGAAGCTTTATTTCGTTACATCGAGATTTG
TGAAGGTAATATCGTTATTCAAGAAGAAGTTTGTACTCAAAGTGGAGatg
atgaaaatatttcaaatctaaTCACCAAAGATCAAGATGAAACGACCACC
GAAAGTGGTGATGGTGCTACGGCTCCAAAACCGACCCCAGATCGAGTCGA
AAAACAAGCCGAACCCACTACAACAGACCAAGACCAACCAACTGAATCTA
TGGCGGTTGATGATTCTGAAACAACCgccccaccaccaccaccacccaAA
CAACGTATTTCTAACAAcgagttaatccgattaaatcACATCCTATTGAA
AGAATTGATCGAGTTACGAAATGAGCGTGATATGTTAcgagaaaatgttt
tcttttctggAGATGATGCCAGCGAATCTTCAGATGCGTTAACTGAAGAA
GAAGATCATGCTTGTGAACATTGTTCTGAAACTGATCTATCTGCTTCTTC
AATGTCAAAGAAAATAGATAATGGTGATGATGATTACGAACATaatgatg
ataatgatgatatgaagaaaatcgaaaatgaaTCTGAAGAAGACACTGAG
TAAAGACAATctttatttttgtcttcttgAATTAGAGTCTTGTTTCCACA
CTGGATGGAGATCTTAGACATCATCTCTACAGGGTTAACTAGGGGTTAGA
ATGGGGTTATACTTTCAGGCTTACGTATAGGTTATTTCAAGAAAACTGAA
GGGAATCGTGTCAAATTATcttttaacaatgtttatcCAGAGCTGTTTAT
AGTCAGCAAAATATGTTGCTATCAGTTAAAAACTGCTCTTTAGAAAGCCC
ATATCAACAAGCCTACGGGGTTATATCCTTATGGGATTGTCCAAATTTTA
GCATatttatgtttaaaaaattcatttaaaaatgtaaatagaATAATTTC
GTATGAGTTCGTACATtccaaattaaattatttttgaaaattttgatatc
ttgTAAAGtagttaaaattttgattattctggaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014282-exon-sc0000185-1491911889:178806..181389 | TCONS_00014282-exon-sc0000185-1491911889:178806..181389 | Clytia hemisphaerica | exon |
| TCONS_00014282-exon-sc0000185-1510915933:178806..181389 | TCONS_00014282-exon-sc0000185-1510915933:178806..181389 | Clytia hemisphaerica | exon |
| TCONS_00014282-exon-sc0000185-1575043694:178806..181389 | TCONS_00014282-exon-sc0000185-1575043694:178806..181389 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000185 | supercontig | sc0000185:178806..181389 + |
Blast
The following BLAST results are available for this feature:
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