TCONS_00001324 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001324
Unique NameTCONS_00001324
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2693

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001324 ID=TCONS_00001324|Name=TCONS_00001324|organism=Clytia hemisphaerica|type=transcript|length=2693bp
CGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGCCAC
CTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTG
AACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATACAA
CTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAACTG
AAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGA
GGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCAATC
TCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAGCAG
CACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATTGAT
AAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAG
ATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCACCTG
TACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAA
CCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAG
GGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATGAAA
TGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAG
CCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGA
GGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTA
AAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACCTTA
GAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGG
AAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCAC
CTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCA
AAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAAT
GCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGC
CCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCT
TCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGACAG
ATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAACTC
ATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCA
CCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGcgCGCAACGA
GAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCAC
CCAGAACGCCAAAAATGTCACAACCACAAAACTCGATGCCTCCAAAGCTT
ATGGGAAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGA
TCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCGT
ACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACAA
ACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGA
GCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGgATG
GTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATA
TCAATCTTTCACGATAATGTTGTCCGCAATTTACAGCTGCTTCAAAAAGA
CGGTAAAATGTACTTGGGAAGTTCTACTGAGGGGTTTGAAGGAGTACCTG
AATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGGT
AAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATT
TATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGAA
TCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAA
TTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAAC
CGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGCT
TTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGA
TCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcctc
gggggaattctattgtaatactcccgaaacaattccacaatgcatcgctt
ttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGAA
AAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGGA
TATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACA
AACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGA
TACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgta
aatacgaatttgattatttttctaaataattaTTGATAGATGAATAGGTT
TTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAAct
taaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139250..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001324 ID=TCONS_00001324|Name=TCONS_00001324|organism=Clytia hemisphaerica|type=transcript|length=15891bp|location=Sequence derived from alignment at sc0000010:139250..155140+ (Clytia hemisphaerica)
CGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTAACA
ATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTATTTC
ACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAACAT
TAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctgacg
cctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGACCA
TTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGTATT
TCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAGGAA
CGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGGACT
GTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAACCT
GTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttctct
TGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCACCAC
CAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGATAGC
ATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAACAG
TTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAACAT
AATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTATTGG
GTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttcaatg
tgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATTGAT
CGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATATTTAC
GGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccctcttt
tttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTG
TGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAG
AGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGA
ATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGT
TcgagacgctgacgcctttgaccacttagCCATCACTCCATAATTGCTCT
ATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATT
GTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAG
AAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGGTAATC
ATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGT
ACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatc
taaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACC
GCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAACA
ATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGGTAGGT
TATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTT
GTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTG
CATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAA
AGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGA
GTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagcccccccccc
cagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACCAACGT
GATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaaaggtg
actgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACATAGAT
TTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggttttaaa
agtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTACGAAG
TTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATTCAGGA
CTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATAGTTTT
AACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATAAAG
TGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTTCGGGG
AAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATATGA
TAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGTAACAA
ACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAatat
gatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATTATTTT
GGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGCTTT
ATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGTGTTTA
GATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaattcaaaG
TACACGATTtattagtctacacaatagacagatacaggcttttaggcctt
actcttgttCTATAGGCACTgatataggcggccactagtgaaccccaccg
ggaattgcttattaataggtttaaacataatagacaacattcacaaaaga
tgtttatcaatagagattttaaataaaagaatgtttaaaacacagNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGACTA
AACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGGtgaat
catttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTTCTCGT
CTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGATGATTG
AAATctatgtttaaagattttttactgctgaaagtttaaaaaggaagtTT
TTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaaggttttt
ggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCTT
CCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAATCTTAA
ATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacatatatg
agtactacaaggttttttgacgatttttgacataccctcacctaattttt
gaaaaaggaattttagtacacatgtactgaaatttatttttacattttag
caTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGAATG
TGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAGCTGTC
AATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAAACAGT
CAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATGGGT
TATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttgagataa
aaatttcctattgaaatattaatggggatacaaattctattgttccaagg
ttaaaaacccagtggggatatgattttggagtgcaatttttacacatgga
attttgagtggggatgaaatcaaagtcaatttcccagtagggctgaaatt
caagggtattctaccaccggggacaaaatttttgcttaatttgtgacaca
gggacgtatttaaatcttatatagagagtttttattttttcattttgcct
aaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtagttaaatttcctaaaatttggtgatttttagtactcatgt
attaaaatttttcttaaatttcttgaagacccccacctaatttgggattt
tagtacacatggtactaaaatgcttttaggctttttttgtaataccacca
cgtcactaaaagtcatgatgtctgaaattttagtaccgacccccccccct
ctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctctagtt
tagacggccgactttctgccctgtctattctaattgttagagtaggcaga
agtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaaaagag
ggcgatgcattgactttagacggcccactttatgcccactttgattcaca
attagaatagacagggcaaaaagtgggctgtctaaactagagctaagctC
GTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGTCAGTA
CCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGTATTCT
ACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGGCGTCA
TAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCCTGT
GTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATTTAC
GACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacacctttttt
gacaacaaataatatgcccataacttttgatctagagaagttgggattTT
GAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGTATAGG
Tcttctttgattttgaagacccccaaaaatcatgaattttctgacctttc
aattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTGCAGTT
TTTCAAggttggtaacattcaaattccgaatcagcaccctcaaattgacc
aaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgttttggtGG
CACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAATGAT
GTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAATTGCT
TTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATTTCT
ATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTTCGTTT
AAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATAGAGAT
ATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATTATC
TGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgtacaca
gacccgatatctacggctaatttcaaaaattcatttccgtagacaaacgt
gagatacactctggtacagagtacagCTTAGGGATCTGGATATTACTTTT
GCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGATATTCT
GTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTGCTACT
TTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttTGGAAG
CCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGTTTTAT
GGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTACTTCA
ATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaatac
acgtttttttataagaacaaactatataagaacataaggcttcactggcc
aaaatgttaagagcaagttaagaacattttaaggctttgtggactcaaaa
ccacccaatttcttaggaaaatagtcaaaattattcacaaaatggtcaaa
ataagaacatgttcagaacaattttaggcttaaaactcaaaaagttcaga
acattcaaggcttcaaaaaatttggatgtttttataaaaaaaacgcgtAG
TCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTTACTtt
ccttttctttatttttcatttatcacatttttttttcagtcgCAAGACGA
TCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTGGTGTA
TTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTATTTTG
TGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttatacaaG
TTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATTTGATA
TTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaattttaaac
cccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCAACTTA
ATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATACTTTC
GATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCACAACG
TCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAAC
ACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCT
CCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAA
CATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCG
AACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAA
CCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGC
TCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGC
AACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACAT
TATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTA
CATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAA
CGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCA
AAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAAT
GACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAA
TGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAA
ATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTC
AGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGC
CACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAA
GTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAG
AAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaaatttg
ccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTTTTT
CTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAACATC
ACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAATTTTAT
CGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGTATCCT
CGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGTAAGAA
TTTCTCTCcgactatattcactcaggagatttgggtggcagagcagcata
tgcatttcgtccttattgaGACTCATCCATCAGATATATATCTATCAGTG
AATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGATTAAG
CCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTAGTGTC
CGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaactagccta
gttaactaagcctgtattcacaaggctaggataCACCGCTAATGGCAATA
TAGcattttcggcgctttaaagattttttatatttacggattttatgttt
gccttggaatactggtAATTCAGTTACAagttaccatcagatttatccta
gtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAGGTG
GTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACCATCAT
CTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAAAGACA
GATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAACT
CATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCC
ACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATGATC
ATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAACTTAT
TCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTCCAGAT
TTTTCCacgaaaaagttgattttgtattggaaatccaggagttacaaaaa
acattttacctTAGAAATCCGCtatcgtccaccccctgtatgctGTTTCT
CAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttatccaCT
GACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAGGGGTA
TTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAAAATAG
GATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACAAGTTG
ACATGCATGATAtcgttaatatttttttgttgctttttaagGTCAAGAAC
CTGTATTACCTCGTAAgcataaatatttatatttcattattttgtaaGCT
AAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaaaaaaa
aactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGTCTTTT
ATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCTGAT
GACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTTCAG
CCaaacatattttcaatatatccttcaaaatatttttcatttcagcgCGC
AACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACAT
TCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCATAGCA
ATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtattgact
gaatttaccaatcagctattggttccgtgatgtaatatcagaagacattg
caatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTATTTTA
AAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCATCTT
CTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACTTTC
TGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGCTGCAA
TTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTACGAACC
AGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctggcaca
caacgttgtttcaacgttcatctaacgttatatggacgctgtgaacgtta
gataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATACTCTTG
AATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGAACATC
ATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCGATGCC
TCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTTTGC
GTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGTGGAAA
GCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattattAAAT
AAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACGACG
TATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgtagtatt
attttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgattttcta
aaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGATGATG
AGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTACTTT
TTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTAATG
ACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTCTAT
CAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCGGTG
CGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccctggac
caagttactcaagcaaaatattatgatcggagtttttttgaaattggtac
ccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGATGTATC
ATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctttgagg
gtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTTGGttc
agggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGGTATCA
TTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCCCCGTG
ACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTGGCT
CGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTGCCA
TAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTATCT
GCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTAGGA
TGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCACAAAGA
GACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTACTGTAA
TCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCTTGG
CAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAATAAGTT
ACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaattttt
aaaattgacattttaggtttttaaacataacttttgaacccatgaagtaa
aattaaaaagtaatacaccaaattttaagttaggctttcctctgtATGAT
tcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaaattaa
aaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATATTTCG
ATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATCGTTAA
CCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACCTCTTG
ATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGAACAAT
CAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGGTGACG
GactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattagTTTAC
NAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacattagTT
TACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaattt
cgcgaaattgaatgaaatggaaatttttaaagttttgttttcGACGTTTT
GTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttggacca
ttttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAAACGTT
TCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCTCGCAG
AATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAAGAACA
GTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAACATAA
CCAATGACATACGAAATATCGActttacaaaatagaaatactTAACCACT
CATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTACTTTTT
TATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACATTTTC
TAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCTTTC
CAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACC
TACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAATG
CACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCT
GGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaa
attgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACTGTTCG
CCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgcttcgta
gtacactctgtgcgcattgtctgtttgataaaaaaattcccgtatggaga
cctctgcgatgaagtatgatttatataaatagcaacacttctctcgtctt
ctccccctctctcaccaacactccatcgcagcggtcggtttgaaaaatct
caaatgagaaaaggcaatgacaacagaccctctacggcaatgaattttga
aattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGGAGTCA
AAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACGATCAC
TGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCTAAA
AGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGGAAATT
ATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTCGTAGT
ATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacgctt
tttttataataatacactttataagaatgtccatgataaaaatggccaaa
aaattaaggataatgctaagaatatcaccatcatggaattttgctactca
gctaagaatgacatttttagagcattttcaattataaattgccaattacc
cccaagtaaggctcactcctttcacaaaaatgccattttatgcttgagac
gtatgtactaaatgtcaaatctagtctgaattaggattctaacctaagaa
taatgtaagaatattttaggatgatttttttaagaaaatccatgataaaa
tggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCACACATT
TCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACTTTGTG
ATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCA
CGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAACAAT
CGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCTCAATG
CAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagttttatt
taaaaaagatcttgtaaatcgacgtttaaagcacttatttcggttaataa
agatgtaaaaaatatagattttaattttggttggggtttaaagaattggg
taaaagttttggtcgggtgataaaatatcggggaaaaaattcgtaggggg
aaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACATTTTT
CCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaattg
aagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGAGCAAA
ACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATATATTC
TGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaattaca
aaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATTCTTTT
CCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCT
ACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGACCGGG
AAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCATGCAT
GGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctggtacct
aatagccgggggggggaggaggttggaaaaaatctcaaaacttaataagc
ggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaattaat
tagtgggggggcggctattaggtacccgagagtaagccTTAATACAATCA
CAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAACCAT
TTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAGTTTCT
CAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCTGAA
TTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGGTAA
AGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTTA
TAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGAATC
CAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAATT
CGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACCG
AAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGCTTT
TTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGATC
TTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcctcgg
gggaattctattgtaatactcccgaaacaattccacaatgcatcgctttt
ttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAAA
AGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGGATA
TCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAAA
CTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGATA
CTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgtaaa
tacgaatttgattatttttctaaataattaTTGATAGATGAATAGGTTTT
CTAATGGCggataattctttttttaaatatttgtaATTATTGGTAActta
aatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001324-exon-sc0000010-1491911889:139250..139290TCONS_00001324-exon-sc0000010-1491911889:139250..139290Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:139250..139290TCONS_00001324-exon-sc0000010-1510915933:139250..139290Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:139250..139290TCONS_00001324-exon-sc0000010-1575043694:139250..139290Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:139764..139879TCONS_00001324-exon-sc0000010-1491911889:139764..139879Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:139764..139879TCONS_00001324-exon-sc0000010-1510915933:139764..139879Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:139764..139879TCONS_00001324-exon-sc0000010-1575043694:139764..139879Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:145789..145840TCONS_00001324-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:145789..145840TCONS_00001324-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:145789..145840TCONS_00001324-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:146166..147125TCONS_00001324-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:146166..147125TCONS_00001324-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:146166..147125TCONS_00001324-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:147920..148090TCONS_00001324-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:147920..148090TCONS_00001324-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:147920..148090TCONS_00001324-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:148845..148919TCONS_00001324-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:148845..148919TCONS_00001324-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:148845..148919TCONS_00001324-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:149525..149567TCONS_00001324-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:149525..149567TCONS_00001324-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:149525..149567TCONS_00001324-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:151931..152168TCONS_00001324-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:151931..152168TCONS_00001324-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:151931..152168TCONS_00001324-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:153135..153223TCONS_00001324-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:153135..153223TCONS_00001324-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:153135..153223TCONS_00001324-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:153810..153855TCONS_00001324-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:153810..153855TCONS_00001324-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:153810..153855TCONS_00001324-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:154279..155140TCONS_00001324-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:154279..155140TCONS_00001324-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:154279..155140TCONS_00001324-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139250..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00154904	0.00152788	0.0201254	0.016494	1.18114	8.93324e-06	5.68426e-07	0.00165651	0.00665402	0.000725904	0.00068674	8.01431e-10	4.236e-10	0	9.50426e-07	4.90069e-06	0.00199848	1.72652e-08	0	1.39244e-05	1.08094	0.00349071	0.000196594	0.0204604	0	0	3.68528e-07	6.03617e-06	3.24655e-07	0.000160062
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001324 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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