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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013624 ID=TCONS_00013624|Name=TCONS_00013624|organism=Clytia hemisphaerica|type=transcript|length=2180bp
aaaagattCAAACTGTGATGAAATAACTATACTATAACTGTTGTTATCTT
TCAGGCTAGCTAATAAAAAATATGACAACAATTGCTGGACAGGAACGAAC
AGGACTCACTTCATGGACTTAGGTGTGACTCAGATGACAAGGCAACtttc
aaccaaaaaaaaaacagatttcgACATATAAATTCACGTCCATACATAAC
CGAAAATTTGTTGGGTCATCCCACTAAAAGATGCGTGCAAGTATTattga
aacaaacaaaatatgATTTAATGTTTATCNTTGGGTCATCCCACTAAAAG
ATGCTTGCAAGTATTattgaaacaaacaaaatatgATTTAATGTTTATCA
TGCAAACAAATCCACATGATACATAGAAGTGTATTACGTTTTGTCATGAT
GATGGTGTTCGAGTGGTATATGAGATAGATTACATTAGAGTGGTTCAACA
CAGCTGTTTGAGGCGTCAGTTTTGTTAAGCCTGAAGGATGGTTGGTATTA
CGAGATGGCTACTGTTACTAATTCTAGGAGTCTTTTCATCTACCCACCAA
ACGAATGCTATCAAATGTCCTGACCCACAGAAATTTGGTCATGGCCCTGT
CAAGCCGTGCGTTGAACCATCGGACCCAAACAAACGTCCTCCGTCAGGAA
TCGAAACTTGGTTTACTGAAAGCGTATTCAATGATCTTTTCCCGAAATCG
AATCTCGGTTGGGGACCAGATAAATGCTCCCCATACAATTACGAAGCCTT
CAAAATAGCAGCCCGATATTTCCCGAAATTTGGTAATGAATACGTTACAA
AGAACCCGAACGGGACTAAACTAAATACCGATTATACCGCAAATGAGACC
TTTCGTCGCGATGTGGCTGCATTTTTTGCGCACGCCGTTCAAGAAACGGG
TGAAAATGATGCACATCTCTACGACAAGCTACCTAAAGATCAAGCGGCTG
ACTGNACACGCCGTTCAAGAAACGGGCGAAAATGATGCACATCTCTACGA
CAAGCTACCTAAAGATCAAGCGTCTGATTGTTTTTATCGTGGTGGATTTT
ATAATTGGTTTGAAGGAGGTCCTGTCTCATCTTTGGTTCAAAATCAAGGT
GCAAATGTTGAGGATGGTGTCCATTGTATTTTCAATGCACTTTATTGTAA
TCACTTCTTCAATAATACGTACTTCTATCCATGTAATTCGCATAAGGAAG
GCGACTGGTATAAGgGGTGTTATTTTGGTCGTGGTGCTATCCAAATCTCG
TACAGTTTCAATTACGGTTTATTCAATCGTTGGTTACTTCAAAACAACAT
CAAACATCAAGGACAGCCAATTGACCTTCTAAAAAATCCAAATCTCGTCA
TCACCAAGATGGACCCTCCATTGAGTATCCTGGCATCTCTATGGTTTTAT
ATGACGCCACAAAGTCCAAAACCCGCAATGCATGATATTGTTGTCGGAAA
TTGGGTGTCACCTGACACAGACTATAATGGTGGTGTATTTGGACCAACAT
CTCTGGTTATCAACAAAGAATGCAATGGTGAGGATCCACAAGAACCTGGA
GGTGGTGGTGAAAGTCGAAGAATTAAAGCTTTTAGATGGTTTACTAATTA
TTTCAAGGTTCCTTTCAATTCTGGTGATGCTAAGACTGTCTCTTGTAAAC
AATTCAATGGTGGCTCCAAAAGTTTTAAGTTCCCAAAAGGAATGACTGTC
TATCTATCATGGGATATTGACTGGAAAACGTCAGCTGATCCAACAATGCC
ATGCACTTGTAATATGAAAGTCTACCAAGGACCTATCGTTGCTTTTGATC
CTGTCATTATGCCACAATATAAGCATCAAAACGAGGCAAATAAAAAatgg
tgtgaaaatatttatcaGAGAGGCTGGAATAAACAAGCATGCGCCAACCA
TACTGTCACTGAATCTTCTTTAtcagaaacaatggaaaaattTCTGGAAA
TTCTGGTATAAGAGGAGAaagttttaaatcaaaattaactTAAAGCTTAA
AAGATTGGAAGGGTATTCAACAGATTAAATATGTCGAAATActtttaaat
aacttttacCGGGATAATTTTGAAAACGTTTGATGTTACATGGTATCTGA
CATTTACTGATCCCAATTTATTCACATACATTCTAGGCTTTTTCTTTAAT
ATAAAAGATATAAATTATCACACTCAAAAT Run BLAST on NCBI protein sequence of TCONS_00013624-protein >TCONS_00013624-protein ID=TCONS_00013624-protein|Name=TCONS_00013624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MRPFVAMWLHFLRTPFKKRVKMMHISTTSYLKIKRLTXHAVQETGENDAH
LYDKLPKDQASDCFYRGGFYNWFEGGPVSSLVQNQGANVEDGVHCIFNAL
YCNHFFNNTYFYPCNSHKEGDWYKGCYFGRGAIQISYSFNYGLFNRWLLQ
NNIKHQGQPIDLLKNPNLVITKMDPPLSILASLWFYMTPQSPKPAMHDIV
VGNWVSPDTDYNGGVFGPTSLVINKECNGEDPQEPGGGGESRRIKAFRWF
TNYFKVPFNSGDAKTVSCKQFNGGSKSFKFPKGMTVYLSWDIDWKTSADP
TMPCTCNMKVYQGPIVAFDPVIMPQYKHQNEANKKWCENIYQRGWNKQAC
ANHTVTESSLSETMEKFLEILV Run BLAST on NCBI transcript from alignment at sc0000170:442619..451744- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013624 ID=TCONS_00013624|Name=TCONS_00013624|organism=Clytia hemisphaerica|type=transcript|length=9126bp|location=Sequence derived from alignment at sc0000170:442619..451744- (Clytia hemisphaerica)
AAAAGATTCAAACTGTGATGAAATAACTATACTATAACTGTTGTTATCTT
TCAGGCTAGCTAATAAAAAATATGACAACAATTGCTGGACAGGAACGAAC
AGGACTCACTTCATGGACTTAGGTGTGACTCAGATGACAAGGCAACTTTC
AACCAAAAAAAAAACAGATTTCGACATATAAATTCACGTCCATACATAAC
CGAAAATTTGTTGGGTCATCCCACTAAAAGATGCGTGCAAGTATTATTGA
AACAAACAAAATATGATTTAATGTTTATCNTTGGGTCATCCCACTAAAAG
ATGCTTGCAAGTATTATTGAAACAAACAAAATATGATTTAATGTTTATCA
TGCAAACAAATCCACATGATACATAGAAGTGTATTACGTTTTGTCATGAT
GATGGTGTTCGAGTGGTATATGAGATAGATTACATTAGAGTGGTTCAACA
CAGCTGTTTGAGGCGTCAGTTTTGTTAAGCCTGAAGGATGGTTGGTATTA
CGAGATGGCTACTGTTACTAATTCTAGGTAAGTCATACTTTTTAAAAGAG
AAAATTTGATGGTTTAAGATTCTCCAAATCTTTTTGTCTATAATTCTTTT
CCAAAAGCAAGATATTAATTTTACACTCGAACGGGGAATGTTATTTCTTC
GAAAAACAGATTTTCGAATTTAAAAAAGTTGGAATGATAGAAAGTTCGAA
TAAGCGAGAGTCTACTGTACAATCTTTTAATAAGAAAACAATAGAATTTT
GACGTAAGAAACGTATAAGAACTCATATTCAGAGATTTAGAGTTGGAAGA
AAGTGAGAGTGAGACATAAAGATATGGAGGCTTCGCTAAGGAAAATGGAA
GGAAGATACAGGCTAAAGATTTCATACCATCAGATGGTATTTACTTTGTG
GGCGTAATTATATTTCTGGACATGTGACAAGGAACCTGTTTTAGCCAATT
AACATTTCTTTTTCAAATAAAAAACATAATTCTACTTGACTTTAAGTTTT
AATCAAATTATGAGGGATTTTAGGTTATTAGGTTATCTTACTTTTGTTTT
ATCCAATCGAATTTTTCCTCTTTAGGACAGTAGCGCAATGACACCCACTC
TATACAAACCTTTTCCCCTCAGAGGTCGAAACTTGTTTGTTTTTGAAGTG
CTTCTCGGAAAGATTTCTGTTTACCTAACTAACAAGATATCCATGGTGAT
GTTGAACAGATTTCTTCTTTTGAATGACTTAAAAAAAAGATAACTATTTC
CTTTTTTAGGAGTCTTTTCATCTACCCACCAAACGAATGCTATCAAATGT
CCTGACCCACAGAAATTTGGTCATGGCCCTGTCAAGCCGTGCGTTGAACC
ATCGGACCCAAACAAACGTCCTCCGTCAGGAATCGAAACTTGGTTTACTG
AAAGCGTATTCAATGATCTTTTCCCGAAATCGAATCTCGGTTGGGGACCA
GATAAATGCTCCCCATACAATTACGAAGCCTTCAAAATAGCAGCCCGATA
TTTCCCGAAATTTGGTAATGAATACGTTACAAAGAACCCGAACGGGACTA
AACTAAATACCGATTATACCGCAAATGAGACCTTTCGTCGCGATGTGGCT
GCATTTTTTGCGCACGCCGTTCAAGAAACGGGTGAAAATGATGCACATCT
CTACGACAAGCTACCTAAAGATCAAGCGGCTGACTGNACACGCCGTTCAA
GAAACGGGCGAAAATGATGCACATCTCTACGACAAGCTACCTAAAGATCA
AGCGTCTGATTGTTTTTATCGTGGTGGATTTTATAATTGGTTTGAAGGAG
GTCCTGTCTCATCTTTGGTTCAAAATCAAGGTGCAAATGTTGAGGATGGT
GTCCATTGTATTTTCAATGCACTTTATTGTAATCACTTCTTCAATAATAC
GTACTTCTATCCATGTAATTCGCATAAGGAAGGCGACTGGTATAAGGTAC
ATACATCATTTTTACTTAGCCTATTTTATAAGATTCATGCATCTGTTACA
TGCTGCAATCATGGTCGTAATATTTGAGAAAAAAGGGAAATTCTATTTGG
AAGCGCTCTAAATTATAAGCAAGTGTATGCCCCTTGGTCAAGCTCGTGTA
TGCTTAAGTTCTCAAAGCATCCAGGCTATGCTTATTATATGTTATGCTTA
TTATATGCTTATGAATCATGCTTGTGATTCACCTCGAGCCAAGTTTTTAG
TGAAATTTCAGAGATTTTGTAAAAAAATTGTTCAGATTTTGGGAGTAGAG
GAATGTAGGAAACCATGGAAAGTCTTTTTTTTTTTACTTAACCTCTACCA
AATCTTTTCAAACCTGTTTAAACAGATAAAAATGACAACTTGAAAGAAAT
CCTTAATATCAATTTTAGTTGCCTGAGGATTGCCGCCAAATGGCATGAAA
CTGCCAGTAGCAGAATAAAAAAGTGTCTTTTCTTACTGACTGAAAGAAAT
CCTTAATATAATCTCTCGTGCATACCAGTGTGTCACAGAAACTGGAAACA
TCGGTTGAGATTGGCCCCAAAGAAGAAATATCCAGAAATTTCTTTTTCTC
ATCGAAAACACTATACACAGGACTCTCATTCGCATGGAAGCCGGTAACTC
GTCACTGAGACAGGGGTGTCTGTTCACAAGAAGATCTTATATTATAAGAA
CACGAGGATGAAAAACCATTCTTGAACTTTTGGATCCTGAGATCCTAAGG
TCCTAGGTGTTGAAACTCAGAGTTAAAACTCTACCCTTTCAACTTACATG
TTTTTCTTATTATAAGCATAACGCTTATAAGCATAAGAAGGCTCACATTT
GCAGAGTTCCTAAACATGACATAAGCATATGTGTCAGCCTAAATTGATAT
TAAGGATTTCTTTCTTCTTTTAAGGGGTGTTATTTTGGTCGTGGTGCTAT
CCAAATCTCGTACAGTTTCAATTACGGTTTATTCAATCGTTGGTTACTTC
AAAACAACATCAAACATCAAGGACAGCCAATTGACCTTCTAAAAAATCCA
AATCTCGTCATCACCAAGATGGACCCTCCATTGAGTATCCTGGCATCTCT
ATGGTTTTATATGACGCCACAAAGTCCAAAACCCGCAATGCATGATATTG
TTGTCGGAAATTGGGTGTCACCTGACACAGACTATAATGGTAATTCAGTA
TATGTACTGGGCTGTCCCATTAAAAATCCATACCGGGGGATGGAGCAATC
TTTTCAAGTCGAATTTTTGAAAATGGCAAAAATTTACAAATAATACCCTT
GCAAAAAAAATTTATAATACCTTAAAGTGACGATGGACGAACTGAAATCA
GTCTTTTATTTTTAGAATAACTTTTTGCCTCCTGGGAAAAATGGGAAAAT
ATTTGTCCACCCCTGTCAGGATATGTAGAAAAACCTTAAAGACTACATAA
ACTGCGTAGATTCATTGCAGTGGTGCCTATCTAAGATAAAAGTAATTTTC
AGTTTGTTTTTTATCGGTGTGAAGAAAGTGATCAGTTGGAGAGAAAATAT
TTTACATTTCTCAAATGTTAGTAATAAATTCTTTCATTTTCCTAAGCTAA
ATAAAGCTTTTGGGTTTTCAGCAAATAGGAACAAATTTTTACGGTTGACA
CCCAATAATACAATAATTTGTATCTACATTTGACTCTTTCTAATTCGATC
TTCAAGGAACCAAAAGTTTTATTCGATTTAGAGAAAGTATTTTATAGGAC
TTTCCAACTGGGGTCAAGCTGGAGTTTTTACAAGATACTTACAAATCAGA
GATGCTTTCAGCATAGAACTTTTTTCTATAGTATACAGTGAAATTGCTTT
ATAAAATACAGAACAGATAGGAGGTAAATGAAAGATATATACCTCAAGCG
TCCCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCATGGTCCCGAA
GTCCCGAGTCGAACTGTAACAACACTCTCCAAAGTATCTACAACCCCAGG
TCCCGAGGTCCCGAAGTCCCGAGTTGAACTATAACAATACTCTCCAAAGT
ATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTTGAACTGTGCC
AACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCC
GAGTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCA
TGGTCCCGAAGTCCCGAGTTGAACTGTGCCAACACTCTCCAAAGTATCTA
CAACCCCAGTTCCCGAGGTCCCGAAGTCCCGAGTTGAACTGTGCCAACAC
TCTCCAAAGTATATACAACCCCAGGTCCCGTGGTCCCAAAGTCCCGAGTT
GAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTC
CCGAAGTCCCGAGTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACC
CCAGGTCCCAAGGTCCCGAAGTCCCGAGTTGAACTGTGCCAACACTTTCC
AAAGTATCTACAACCCTAGGTCCCGAGGTCCCGAAGTCCCGAGTTGAACT
GTGCCAACGCTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGAA
GTCCCGAGTTGAACTATAACAACACTTTCCAAAGTATCTACAACCCCAGG
TCCCGTGGTCCTGAAGTCCCGAGTTGAACTATAACAACACTCTCCAAAGT
ATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTTGAACTGTGCC
AACACTCTCCAAAGTATCTACAACCCCGGGTCCCGTGGTCCCGAAGTCCC
GAGTCGAGTTGAGCTGTCACAACACTCTCCAAAGTATCTACAACCCCGAG
GACCCGAAGTCGCGAGTTGAACTGTGCCAACACTCTCCAAAGCAGCTACA
ACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTCGAGTTGAGCTGTCACAA
CACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGA
GTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTG
GTCCCGAAGTCCCGAGTCGAGTTGAGCTGTCACAACACTCTCCAAAGTAT
CTACAACCCCGAGGACCCGAAGTCGCGAGTTGAACTGTGCCAACACTCTC
CAAAGTAGCTACAACCCCAGGTCCCGTGGTCCCGAAGTCCCGAGTTGAAC
TGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCCGA
AGTCCCGAGTTGAACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAG
GTCCCGTGGTCCCGAAGTCCCGAGTTGAACTGTCACAACACTCTCCAAAG
TATCTACAACCCCAGGTCCCGAAGTCCCGAGTTGAACTATCACAGCACTC
TCCAAAGTATCTACAACCCCAGGTCCCGAGGTCCCAAAGTCCCGAGTTGA
ACTGTGCCAACACTCTCCAAAGTATCTACAACCCCAGGTCCAATGTTCGG
TCAAGTCCAGCAACGTGATATAATCAATTCAAATATCCAAAATTCCAAAG
AAAAGTAAGTCCAATGTTCGGTCAAGTCCAGCAACGTTTTTAATGATTTT
AATGATTAAGTAAGTTTTCCTTGAAGTTATCCAGTTTTTTCGCGAGTGTG
CTTCTCGATTTCAGATTTTCAGATTTTTGACCATGCTGATGCATAAAACA
CTATGACCAAATCAGAAATGTTTTTATTTTCAACAAAAGAAGTAAAAACA
AACAATTACTATAAATAAATAGTAAAATATATCTTTAATTTTATTTTGAT
CATTTATATTAAATTTATTTAGATTAATCCTTAACAAAATGGACAACAAT
AGTTTTATATAAAGTCATGGTTTTGTTTCTGTATACCACGAGGTCGCTTC
GTCGCTTCACTGTATTTTCTCCTTCGTGCGCACTCGCTGATTTCTTCAAC
TCGGGACCTCGGGACATCGGGACCTGGGGGTGTGGGTTTTATTGGATGAA
GAGAACATAGCTCAACTCGGGACTTCGGGACCTGGGGTTGTAGATCCTTT
GGAAATAATAGTGATATAGCTCAACTCGGGACCTCGGGACCTGGGGTTGT
AGATCTTTTGGAAATAATAGTGATATAGCTCAACTCGGGACCTCGGGACC
TGGGGTTGTAGATCTTTTGGAAATAATAGTGATATAGTTCAACTCGGGAC
CTCGGGACATCGGGACCTGGGGGTGTGGGTTTTATTGGATGAAGAGAACT
AACTCGGGCCTTCGGGACCTCGGGACCTGGGGGTGTGGGTTTTATTGGAT
GAAGAGAACATAGCTCAACTCGGGACTTCGGGACCTCGGGACCTGGTTTT
GTAGATCTTTTGGAAATAATAGTGATATAGCTCAACTCGGGACCTCGGGA
CCTCGGGACATCGGGACCTGGGGGTGTTGGTTTAATTGGATGAAGAGAAC
ATAGCTCAACTCGGGACTTCGGGACCTCGGGACCTGGGGTTGTAGATCTT
TTGGAAATAATAGTGATATAGCTCAACTCGGGACATCGGGACCTGGGGGT
GTGGGTTTTATTGGATGAGGGGAACATAGCTCAACTCGGGACCTCGGGAC
CTGGGGTTGTAGATCTTTTGGAAATAATAGTGATATAGCTCAACTCGGGA
CCTCGGGACCTGGGGTTGTAGATCTTTTGGAAATAATAGTGATATGGAGG
TATAACATATCGGGTGTGCTTGTTCCGTAAAATACACACAAAGAAAATCG
CATCCCAGCTTGTAAAAACTCCAGCTCATCCGTCCAACTGAAGGGACCCA
TATTTTTAAGTTCGAATTACAGGGAGATTCGAATTAAAGAGGTTTGAATA
AGAGAGAGTTAACTACAGTGTAGTCTCTTTAACTCGAACCTCTATAACTT
GAATGTCTCCCTAACTCGAACAAGTTTTATTATCAGTTAACAATGCTCTA
TAAACCTTACTCCATAACTCGAAACTTCCTAAACTCCAACAAGTATGTGT
TCCCCTTGTCTGTACACAGACCTAGTATCTTCGACTAATTTCGAAATTCA
TTGCCGTAGAAGGTCTGTTGTCATTCTCTTTTCTCATTTGAGATTTTTCA
AACCGATCGCTGCGATGGAGTGTTGGTGAGGGAGGGGAGACGGTGAGAGA
AGTATAAATCATACTCCATCGCAGAGGTCTCCCTTCGGGAATTTTTTATC
AAACAGACAATGCGCACAGAGTGTACTACGAAGCGATAAACGTGAGATAC
ACTCTGGTACAGAGTAGTGTTCCCCGTGCGCGTTCAAGTTATGGAGACTC
CACCGTAGTTAGATCATTCTTTTTCGTTTGATCTTAATAGGTGGTGTATT
TGGACCAACATCTCTGGTTATCAACAAAGAATGCAATGGTGAGGATCCAC
AAGAACCTGGAGGTGGTGGTGAAAGTCGAAGAATTAAAGCTTTTAGATGG
TTTACTAATTATTTCAAGGTTCCTTTCAATTCTGGTGATGCTAAGACTGT
CTCTTGTAAACAATTCAATGGTGGCTCCAAAAGTTTTAAGTTCCCAAAAG
GTATGCTTTTAAAATCTAAAGTGTATGTGCGGAAAAAACAAAACAGGATT
TATCTAACGAAAAATTTATGATTTATGTCAACTTTAAAGGCCAATAACTT
GATTTATGTTTTTTTTCTTAATTAACAGCAACCTTGAAAATAAATCGCCG
ACATTACTGAAAAACAATTCTGATATATTTAGGCATTGGGCTCTTCCAGA
AAAAATCCGTTCATGGGGGGTGGAGGATGAATTGTCCAGGGGTATTAAAA
AAATGCCAAAAAATTGCAATGTCCAGGGGGTAAATTCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCGA
GTGTTGTGTAATAGAATCCTGGTGCGGCAGAGCTGATAGGTTGAAGATAT
TTTAAATTATGTTAAAAATCTATGCTGTGGGGAAGGTTTTATCCCGCTTG
AAAAAAATTTTTGCCTGCGCCGCAATAAATTTATCGAGAATTTGTATGCA
AAGATTCTTTGATATTTTGTTTTGTGAAGGCGGGGGCTATGTTTCTAGAA
TTTAGCCGGGGCTATTTTCCTTAGCCCCAACTGAAAAATGCTGGGGGCTG
GACCCCTCTGCACACTATGCGTGTATGGATACTAAATCTAAATCGTATGA
CTCATAATGAAATAAGCTTAAGTAAGGGTTCAGCCTTTGAAATGCATCTA
CTTTTCTACAAAAAGAAACTTCAGAGTTAAACCAAAAGAGGACTTCTCTC
TAGTATTGACTTCTAGTTGTTTCAAAATTAATCCCAAAGATTTTTAATGA
AAGTGTCAACTGAGGTCATTTCTATTCTATTTCAGGAATGACTGTCTATC
TATCATGGGATATTGACTGGAAAACGTCAGCTGATCCAACAATGCCATGC
ACTTGTAATATGAAAGTCTACCAAGGACCTATCGTTGCTTTTGATCCTGT
CATTATGCCACAATATAAGCATCAAAACGAGGCAAATAAAAAATGGTGTG
AAAATATTTATCAGAGAGGCTGGAATAAACAAGCATGCGCCAACCATACT
GTCACTGAATCTTCTTTATCAGAAACAATGGAAAAATTTCTGGAAATTCT
GGTATAAGAGGAGAAAGTTTTAAATCAAAATTAACTTAAAGCTTAAAAGA
TTGGAAGGGTATTCAACAGATTAAATATGTCGAAATACTTTTAAATAACT
TTTACCGGGATAATTTTGAAAACGTTTGATGTTACATGGTATCTGACATT
TACTGATCCCAATTTATTCACATACATTCTAGGCTTTTTCTTTAATATAA
AAGATATAAATTATCACACTCAAAAT Coding sequence (CDS) from alignment at sc0000170:442619..451744- >TCONS_00013624 ID=TCONS_00013624|Name=TCONS_00013624|organism=Clytia hemisphaerica|type=CDS|length=4476bp|location=Sequence derived from alignment at sc0000170:442619..451744- (Clytia hemisphaerica)
GAATGACTGTCTATCTATCATGGGATATTGACTGGAAAACGTCAGCTGAT
CCAACAATGCCATGCACTTGTAATATGAAAGTCTACCAAGGACCTATCGT
TGCTTTTGATCCTGTCATTATGCCACAATATAAGCATCAAAACGAGGCAA
ATAAAAAATGGTGTGAAAATATTTATCAGAGAGGCTGGAATAAACAAGCA
TGCGCCAACCATACTGTCACTGAATCTTCTTTATCAGAAACAATGGAAAA
ATTTCTGGAAATTCTGGTATAAGTGGTGTATTTGGACCAACATCTCTGGT
TATCAACAAAGAATGCAATGGTGAGGATCCACAAGAACCTGGAGGTGGTG
GTGAAAGTCGAAGAATTAAAGCTTTTAGATGGTTTACTAATTATTTCAAG
GTTCCTTTCAATTCTGGTGATGCTAAGACTGTCTCTTGTAAACAATTCAA
TGGTGGCTCCAAAAGTTTTAAGTTCCCAAAAGGGGTGTTATTTTGGTCGT
GGTGCTATCCAAATCTCGTACAGTTTCAATTACGGTTTATTCAATCGTTG
GTTACTTCAAAACAACATCAAACATCAAGGACAGCCAATTGACCTTCTAA
AAAATCCAAATCTCGTCATCACCAAGATGGACCCTCCATTGAGTATCCTG
GCATCTCTATGGTTTTATATGACGCCACAAAGTCCAAAACCCGCAATGCA
TGATATTGTTGTCGGAAATTGGGTGTCACCTGACACAGACTATAATGATG
AGACCTTTCGTCGCGATGTGGCTGCATTTTTTGCGCACGCCGTTCAAGAA
ACGGGTGAAAATGATGCACATCTCTACGACAAGCTACCTAAAGATCAAGC
GGCTGACTGNACACGCCGTTCAAGAAACGGGCGAAAATGATGCACATCTC
TACGACAAGCTACCTAAAGATCAAGCGTCTGATTGTTTTTATCGTGGTGG
ATTTTATAATTGGTTTGAAGGAGGTCCTGTCTCATCTTTGGTTCAAAATC
AAGGTGCAAATGTTGAGGATGGTGTCCATTGTATTTTCAATGCACTTTAT
TGTAATCACTTCTTCAATAATACGTACTTCTATCCATGTAATTCGCATAA
GGAAGGCGACTGGTATAAGGAATGACTGTCTATCTATCATGGGATATTGA
CTGGAAAACGTCAGCTGATCCAACAATGCCATGCACTTGTAATATGAAAG
TCTACCAAGGACCTATCGTTGCTTTTGATCCTGTCATTATGCCACAATAT
AAGCATCAAAACGAGGCAAATAAAAAATGGTGTGAAAATATTTATCAGAG
AGGCTGGAATAAACAAGCATGCGCCAACCATACTGTCACTGAATCTTCTT
TATCAGAAACAATGGAAAAATTTCTGGAAATTCTGGTATAAGTGGTGTAT
TTGGACCAACATCTCTGGTTATCAACAAAGAATGCAATGGTGAGGATCCA
CAAGAACCTGGAGGTGGTGGTGAAAGTCGAAGAATTAAAGCTTTTAGATG
GTTTACTAATTATTTCAAGGTTCCTTTCAATTCTGGTGATGCTAAGACTG
TCTCTTGTAAACAATTCAATGGTGGCTCCAAAAGTTTTAAGTTCCCAAAA
GGGGTGTTATTTTGGTCGTGGTGCTATCCAAATCTCGTACAGTTTCAATT
ACGGTTTATTCAATCGTTGGTTACTTCAAAACAACATCAAACATCAAGGA
CAGCCAATTGACCTTCTAAAAAATCCAAATCTCGTCATCACCAAGATGGA
CCCTCCATTGAGTATCCTGGCATCTCTATGGTTTTATATGACGCCACAAA
GTCCAAAACCCGCAATGCATGATATTGTTGTCGGAAATTGGGTGTCACCT
GACACAGACTATAATGATGAGACCTTTCGTCGCGATGTGGCTGCATTTTT
TGCGCACGCCGTTCAAGAAACGGGTGAAAATGATGCACATCTCTACGACA
AGCTACCTAAAGATCAAGCGGCTGACTGNACACGCCGTTCAAGAAACGGG
CGAAAATGATGCACATCTCTACGACAAGCTACCTAAAGATCAAGCGTCTG
ATTGTTTTTATCGTGGTGGATTTTATAATTGGTTTGAAGGAGGTCCTGTC
TCATCTTTGGTTCAAAATCAAGGTGCAAATGTTGAGGATGGTGTCCATTG
TATTTTCAATGCACTTTATTGTAATCACTTCTTCAATAATACGTACTTCT
ATCCATGTAATTCGCATAAGGAAGGCGACTGGTATAAGGAATGACTGTCT
ATCTATCATGGGATATTGACTGGAAAACGTCAGCTGATCCAACAATGCCA
TGCACTTGTAATATGAAAGTCTACCAAGGACCTATCGTTGCTTTTGATCC
TGTCATTATGCCACAATATAAGCATCAAAACGAGGCAAATAAAAAATGGT
GTGAAAATATTTATCAGAGAGGCTGGAATAAACAAGCATGCGCCAACCAT
ACTGTCACTGAATCTTCTTTATCAGAAACAATGGAAAAATTTCTGGAAAT
TCTGGTATAAGTGGTGTATTTGGACCAACATCTCTGGTTATCAACAAAGA
ATGCAATGGTGAGGATCCACAAGAACCTGGAGGTGGTGGTGAAAGTCGAA
GAATTAAAGCTTTTAGATGGTTTACTAATTATTTCAAGGTTCCTTTCAAT
TCTGGTGATGCTAAGACTGTCTCTTGTAAACAATTCAATGGTGGCTCCAA
AAGTTTTAAGTTCCCAAAAGGGGTGTTATTTTGGTCGTGGTGCTATCCAA
ATCTCGTACAGTTTCAATTACGGTTTATTCAATCGTTGGTTACTTCAAAA
CAACATCAAACATCAAGGACAGCCAATTGACCTTCTAAAAAATCCAAATC
TCGTCATCACCAAGATGGACCCTCCATTGAGTATCCTGGCATCTCTATGG
TTTTATATGACGCCACAAAGTCCAAAACCCGCAATGCATGATATTGTTGT
CGGAAATTGGGTGTCACCTGACACAGACTATAATGATGAGACCTTTCGTC
GCGATGTGGCTGCATTTTTTGCGCACGCCGTTCAAGAAACGGGTGAAAAT
GATGCACATCTCTACGACAAGCTACCTAAAGATCAAGCGGCTGACTGNAC
ACGCCGTTCAAGAAACGGGCGAAAATGATGCACATCTCTACGACAAGCTA
CCTAAAGATCAAGCGTCTGATTGTTTTTATCGTGGTGGATTTTATAATTG
GTTTGAAGGAGGTCCTGTCTCATCTTTGGTTCAAAATCAAGGTGCAAATG
TTGAGGATGGTGTCCATTGTATTTTCAATGCACTTTATTGTAATCACTTC
TTCAATAATACGTACTTCTATCCATGTAATTCGCATAAGGAAGGCGACTG
GTATAAGGAATGACTGTCTATCTATCATGGGATATTGACTGGAAAACGTC
AGCTGATCCAACAATGCCATGCACTTGTAATATGAAAGTCTACCAAGGAC
CTATCGTTGCTTTTGATCCTGTCATTATGCCACAATATAAGCATCAAAAC
GAGGCAAATAAAAAATGGTGTGAAAATATTTATCAGAGAGGCTGGAATAA
ACAAGCATGCGCCAACCATACTGTCACTGAATCTTCTTTATCAGAAACAA
TGGAAAAATTTCTGGAAATTCTGGTATAAGTGGTGTATTTGGACCAACAT
CTCTGGTTATCAACAAAGAATGCAATGGTGAGGATCCACAAGAACCTGGA
GGTGGTGGTGAAAGTCGAAGAATTAAAGCTTTTAGATGGTTTACTAATTA
TTTCAAGGTTCCTTTCAATTCTGGTGATGCTAAGACTGTCTCTTGTAAAC
AATTCAATGGTGGCTCCAAAAGTTTTAAGTTCCCAAAAGGGGTGTTATTT
TGGTCGTGGTGCTATCCAAATCTCGTACAGTTTCAATTACGGTTTATTCA
ATCGTTGGTTACTTCAAAACAACATCAAACATCAAGGACAGCCAATTGAC
CTTCTAAAAAATCCAAATCTCGTCATCACCAAGATGGACCCTCCATTGAG
TATCCTGGCATCTCTATGGTTTTATATGACGCCACAAAGTCCAAAACCCG
CAATGCATGATATTGTTGTCGGAAATTGGGTGTCACCTGACACAGACTAT
AATGATGAGACCTTTCGTCGCGATGTGGCTGCATTTTTTGCGCACGCCGT
TCAAGAAACGGGTGAAAATGATGCACATCTCTACGACAAGCTACCTAAAG
ATCAAGCGGCTGACTGNACACGCCGTTCAAGAAACGGGCGAAAATGATGC
ACATCTCTACGACAAGCTACCTAAAGATCAAGCGTCTGATTGTTTTTATC
GTGGTGGATTTTATAATTGGTTTGAAGGAGGTCCTGTCTCATCTTTGGTT
CAAAATCAAGGTGCAAATGTTGAGGATGGTGTCCATTGTATTTTCAATGC
ACTTTATTGTAATCACTTCTTCAATAATACGTACTTCTATCCATGTAATT
CGCATAAGGAAGGCGACTGGTATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013624-exon-sc0000170-1575043694:451218..451744 | TCONS_00013624-exon-sc0000170-1575043694:451218..451744 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1575043694:449799..450485 | TCONS_00013624-exon-sc0000170-1575043694:449799..450485 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1575043694:448606..448870 | TCONS_00013624-exon-sc0000170-1575043694:448606..448870 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1575043694:444245..444454 | TCONS_00013624-exon-sc0000170-1575043694:444245..444454 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1575043694:442619..443109 | TCONS_00013624-exon-sc0000170-1575043694:442619..443109 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1510915933:451218..451744 | TCONS_00013624-exon-sc0000170-1510915933:451218..451744 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1510915933:449799..450485 | TCONS_00013624-exon-sc0000170-1510915933:449799..450485 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1510915933:448606..448870 | TCONS_00013624-exon-sc0000170-1510915933:448606..448870 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1510915933:444245..444454 | TCONS_00013624-exon-sc0000170-1510915933:444245..444454 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1510915933:442619..443109 | TCONS_00013624-exon-sc0000170-1510915933:442619..443109 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1491911889:451218..451744 | TCONS_00013624-exon-sc0000170-1491911889:451218..451744 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1491911889:449799..450485 | TCONS_00013624-exon-sc0000170-1491911889:449799..450485 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1491911889:448606..448870 | TCONS_00013624-exon-sc0000170-1491911889:448606..448870 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1491911889:444245..444454 | TCONS_00013624-exon-sc0000170-1491911889:444245..444454 | Clytia hemisphaerica | exon |
| TCONS_00013624-exon-sc0000170-1491911889:442619..443109 | TCONS_00013624-exon-sc0000170-1491911889:442619..443109 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000170 | supercontig | sc0000170:442619..451744 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000726 | Glyco_hydro_19_cat |
| IPR023346 | Lysozyme-like_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004568 | chitinase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016998 | cell wall macromolecule catabolic process |
| GO:0006032 | chitin catabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0016998 |
cell wall macromolecule catabolic process |
| biological_process |
GO:0006032 |
chitin catabolic process |
| molecular_function |
GO:0004568 |
chitinase activity |
Blast
The following BLAST results are available for this feature:
|
