XLOC_010515 (gene) - C. hemisphaerica

Overview
NameXLOC_010515
Unique NameXLOC_010515
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000306:188971..195511+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010515 ID=XLOC_010515|Name=XLOC_010515|organism=Clytia hemisphaerica|type=gene|length=6541bp|location=Sequence derived from alignment at sc0000306:188971..195511+ (Clytia hemisphaerica)
ctAGATCAAGGTATTCTGATGACTTGGGGCAGCGGTGAAGATGGTTGCCT TGGTCACGGAAACACAAATGACGTCAGCCATGCCAGAGTTGTAGAAGATC TTGTCGGTTCAACAGTGGCACAGATTTCGTGCGGTTCCGCCCATATGATG GCTTTGACCAGTAAGTTATCTACGCCATTTTCGTTCTNCCTtgcctacct tcgggtagatagctatcgaaagaggagccttcgggtcgcctccgactgcg gtcgcagacttacttacttctTGCTTGCTTGCTTGCCTAatttaaagaaa agaatttcagcTAAGCTTCAAAGGACAACTCCACTGTTTTTCTATCATAC TAACTGACAATGCTTTGTAACCACTTAGCTTATACCACtaactttttccc aaaattttgacCCCATCACTTCAAACGGCTCTACGAGGCCCATGAGCAAT GTAACCCATCACACCTGATAATTTCCTAAGTGAAACAGTTCACTATCGAG CGGCATTTTGCGTAGTTCaatcttttctattttgttttagctGAGCAACA GGTGTTTGTATGGGGACGAGGCTCTCATGGTAAGATTATCATATATTTCA ATAAATATTCTGCTTTTTTTTTCCCCAAGGTCAGTGATATAGTCCTACAG TACTGAGAtagaaaaaatcgcaaaatagaaattttcctccttgttttgaa ttttctgattggCTGATCCACTCCGTTTCGAGAAAGCTGATTGGCTGTTT TGGCtaagtcaaaaaaattgatcTAATTGGCTTGCTTATACTTTTAAACG ACCGGGCCCTGGGACTTTCTTCATCAGGAATCTCAATCTGGGCTTTTGTA ATTTCAATATGGATTAGAGAAATAGCACCTTACAATTACAATTTTTTGAA TCGCAAAACTTAATGGTTTGAGCTCTATAGCGACAACTTCAGTCTAGGAT TGTATAAAGCTACAAGagcatgaaactgccagtagcagaataaaaaaatg tctttcCTTCCTTCCTTACTGACATCGCTCTTCATATGTATGGtgcatta taaaaaaaactgaagaacTACTTACAAtgtaatacacgtttttctttaaa gaaactagttttaccaagcagcctcaatatTTCTTAagaatcggcctttt gagccttaaatgtttcttacatgtttctaaactttttgacacaatcagcc tatttttcatgcaaagaaaaaaaaacatttgttttgattggaagattttt aaagaaaacgaattaaaaaatgttattttctcattctcagcctcagcatg tttcttagttttaggcattctgagcctcatgtttcttaaaagtgtgtttc ttaaaaaaaaaacgtgtatcctcTCATCTTTCTACTGGGTTCagttgtta aactttttcttttgtaaaggtagtttttggccttcATTAACAGCTCTGTA TTGCTTTCTTCATATTCCCAGGCAACTTTGGCTTGAACGACCGTCACAAT AGATGTAATCCAACCAATGTCCCGTTGCCCATGGATACGAAGCCTAGATC CGTTGTCTGCGGAACAGATTGCTCTTTCATTATTACTGATAAAGGGGCTG TCTATGCTTGTGGAAACAATAGGTGGGTTTGAtataggctgcacgcatcc cctctgatatgttttgatataagggatgtgtatcgtgtataaaattctcg TCTGAGAGTTACCCcagattttgtgtttttgagttttagaaacttgatta gcttgATTAGTAAGTGAATATGAGAGGTctttaaatttcatgaaaattta attcaaaattcGAGTGGTTAGAGGttaatacaatcattggatttctgAAG CTTTTGAATTGAAACAGGTAACTCTGGGACAGGAATTTTGAACacacatc ccctatatcaaaatcaattctggTGAAGCACGCAGTCTAGGTTTGGTAAT ACTTTCTTTACTTTCtttacttttatttcaaaaatttgttaaaGTGTACC TTAAAATGGCACATACTAGTTTAACGCTTAagaattgattttgaaaattt tgggtGGGTTTAGTTTCGCGATTTCGAGAGTTTTTTGTCACAAAAATGGT AAGAATAaagcttttcataaattaagtcaagagcaacgcttacctctttt tcaaaatattgctatgatAATTGATTTCCAAAGGAGTTCAACTTGTTATG CTTCATTTATGTAAAGTAACGCTTGAACCTTGGAAATGGTTTCAAACGAA gcagtcgttgcactcaaaataatttatgaaaaggcctattcgcgaaatta aatatcACGAAAATTTATCCgattataatatttttctttatcccCAGAAA CAACAAGCTTGCATTACTCACAGACAATGAATTAAAGAAaggcaattttt caaaagtggaaAATGATTGCCTCGTTTTCAAGAAGGTCACATGTCACCCC ATATGTGAGCATCGCATTATTTCCATAGCAACCGGTCCAACCCATTCTTG TTTCTTGACTGGTAAGTTTGCTGTGAtcttcaatgttttcttttgattcg GTTTTACACCTGGCGTTTATTCGGCCTAAAGATCGTGATATAATCTTATA ACGTCTCTACTGTGGTAGGTTGGCGCATATAAAAGGGACGATACTTCAAA TTGTGATAGAgctctgaaattttgcacagaggttCCTCATGAAGTCAATT GAGAGTGAGACACTCTTGAAAATGATGTTTCTATTGATGTCagcactttt tttgcaaaaatttcatctccGAAAAACCCTAGTATATTATATACTGCGGA GTATGTTAGCACATACATATAAAAGGGACGATACTTCAAACTGTGATAGA gctctgaaattttgcacagaggttCCTCATGAAGTCAATTAAGAGTGAGA CACTCTTGAAAATGATGTTTCTGTTGATGTCagcactttttttgcaaaaa tttaatCTCCGAAAAACCTTAGTATACTATATACTGCGGAGTATGTTTAG CACATATAAAAGGGACGATACTTCAAACTCATGAAGTCATTTTCAGAGCA CTATCACAATTTGAAGTATACATGTGATAATCCGCCCCACTACTCACAAA ATATAGTAATACAGTAATACTAGAGCCAAAAAGTTCTTTTGTAAAACGGT TATCCGTTGGTTAAAGGACTGGGCCCCATAAAGTACACTAGAGTCTCTCt aactctataactcgaatgtctccttaactcgaatgtctccctAAATTTTA TGATTCCTTCAGgtaacaataccttataaactttactccataaatcgaaa tttccttaattcaTGAAGAATttatgttcgagttatggagacttcacTGT ACCAAAGTACGTAAAAAAGTTTCATAATTATTTAAAACAGAAGCTTGTGC CAGGGACGCGACGCGACGGATGAATGCAACACTTTTGGTTTCCTAGTCAT TGTTAAAGTGTATGCTTCGTCGATTTTCAGCATGAAAAAttcttcacttt ttaaaaaatctttttcactgCCTCCCTTCACTTTTCAAGAGTGACAATAA TTATTTGGTTTTTCAAGTTTTCTATAGTTCACTTGCAATGACTCAGAATT TTAAAGAgaatcactcgtgtgaaaatgCTAATTATAGCACAAccattgaa gaagttgattttcttcttcttcatttttcatctttgtttttccatttttt gaattttaattatagCAATATTCCACTTcggattatctttttaaatagca caaaatcgctacttaattcaaatactatcaaaagttattgaggtttgaaa aaacactgccagctaatttgaaatatactttaattttctatttttcttca tATGTTTATTATAGAATCAGGACTTCTAATCACTTGTGGCGCTAACTCAA GCTACCAGTTGGGTTACGAGAGGCAAGAAAATGATTTACGACCAGGAATT GTTGAATTATCGAGACAGAATCCGATACATTTGATGGATTGCGGTGACCT ACATACTGTGGTTGTCACTTCTGGTACGACATTGACTTTAAGTGTGCGCT CTTTCTCTTTTGCTGCGTGGAAATGTTAACatgaaaaataagtttaaaaa aatattgttaaaggttttcttaattttacataagtgttcccgcttcatat cagacatatatttcatatcaggacaatgtcttgctattattatattatgc tgatataagcaaaaaatgtttttctttttctctttctgacaAATCTtgtt ccacatccgtgtcaatccaatgttagaaagcttttgaattaaaattgatg agtaagcaaacgatatcactcttatttaaaaacaaaacctttaaacccaa aaagtgaaattttggaCCTCCCTCTATAAAGTGCTATATGTGCGTTGTGT GTGCATTTTTGCTTGGGCTGGTTATATCATGAAATAGTCTGGAGTACTCT GCCTTTTTGCTTCTTTTAGACGATCAGATCTACAGTTTTGGTAGTAGCCG CCACGGGCGTTTAGGGCGCCGAACGGATGAAGACTATACTTGGAAACCAC AGCTGATTGAAATCgaagaaaatgacgtcacaatacAATCACTTTCAGTT TCGCACCGAACGACGCTGTTGGCTGGAAAAGGTACGATTATAACGTGAAT GCGTGGGTTTAACCCAAAAAAAGGGCTAGATATTCCATCCACTATTCCAA ATACGTTGCAAAGCTtaatacttttttctttttcttgcttgggtTGAATA TTTCACTCTAGACCGTGGTCTATGATTCCTTCCTGGTCTCTTTTGCATAC CATTTTAACAGTAGGCACAGATTATTTATAAACATTGAAGTAAAAGTGTT ATTAAATTTATTCTGATTTGGTCACAGACCTCTACACATATACTTTCTAC ATGGAAACTTTCTTCTATACTTCCCATAGCACTTTGAATATCTGTTAGCG GTACAAAGATTTCTGAAAATACAAGTTATTACattacacaggaaaaaaat tttgatcccCTAGGCTATGGCAATGTAtatttccagatctggaaatcTGG ATTTTTCCTTAACCAATCCCTAGCTAGGGAAGGTGCAACAGCTCTCTTGT TAGTTATGTAAAGTAGTTTTGGNAATCTGGATTTTTCCTTAACCAATCCC TAGCTAGGGAAGGTGCAACAGCTCTCTAGTTAGTTATGTAAAGTAGTTTT GGCTCAGTTTGctaataagaaaatttgaaaattcatgtggttgaaattat tttactttttttcagttCACAACGCTTCAACATTGACTCCGATGAACTAT TAAGGCTGGTCATTGGTCATTTTCACTGGTAAGTCAGCAATATTTTGTTT TCgataaaaatgatataaaaaatatcaataagtgATAGATGATTCCATCA AAGAGTGCTCGATGATCAGGACCAGAGCTTCATACAgtgtacaagaaaaa acaaaatttgaattgtagtactttaagtttcatcTTTATCGAATCGTCAG ctatcaaatgaaaaatgacaaatgtACACTGCAGAAAGAAAAATGATTAG TTCCAATAATCAAGAGGAAATTGGTTTTTGAGCCTTGAGTTCAATGGATA TTAAATGGAAGAGCAACATTTATCAATATCAGCATCTTTGTCACAACATT TCACGAACGTTCAATGAATGTAGTATGAACATCAAATGACACCCGAAGAA CGCTTTTTAGTGAAACGAGTATATtttcacttttgaggacggcagaTTGA CTGAAACGATTTGTAACAGCTCGCAGTTTTGGCTCGCGAAATCGAGGACG GTGAAactgctgatttaccgtcgtcctcagtcagagTCAAATCAGAACAC ATATATGTACACAACCTCGTTTTTATCTAAACGAATGGATTTTTTGTTCC ATAAATGTGACTTATCTACTTCTTTTTTGTGGAAACTGGAAATTATTGTG ATGATCGACCTCGATGAGTGAAGTCTGCTTAAATATTCGATGTTGGATTG CCTAatacaaatgaaaaatattgaataaaagaCAGGGAAATAAATATCAT ATACACCATTCAGGAtactaaaataaattaaatatttttttgaactaATG TTAAAATCTGTCAAAATGGCGTCTTGTTTGGCGGTCCATTTTCAAGTTCC TGCAATACATGTAGATAGAATGTAGTTTGTGAGCGCGTGACGTTATTCAA TATATcttaaaggaagaaactttGACTGAACGAAAATTTAGCGAATTTGG CGGATTCGACGGATTtacgcaaaaatttcttatttccaCCATCCGCCCAA TTAAATTCCTTCTAAATTTTATTTAGTTATGTATTTTCGAAATTTGTATT TCCGGGAGCgggttttttgtttctttaacaACAGTTTTTTACCGAAGGTG TGTCCTTCAACCGCCTTCACTCTCCTACATAGGATcgttacaaaaagaaa aatgaggaaaagtatgcaaaatttttacaaacattTTTAGCTATGCAAAC CAATGTTTTTTAGATGCATTTTAATTTTtcgcatttttttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018778TCONS_00018778Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018778-proteinTCONS_00018778-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:188971..195511 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.33 1.39 0.68 0.61 11.53 9.4 10.44 12.74 10.92 11.26 9.12 9.26 6.05 6.98 3.9 4.7 4.72 4.41 2.75 3.66 2.51 3.15 2.24 2.46 4.94 6.04 3.51 2.46 3.21 2.18