XLOC_008007 (gene) - C. hemisphaerica

Overview
NameXLOC_008007
Unique NameXLOC_008007
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:289262..293021-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008007 ID=XLOC_008007|Name=XLOC_008007|organism=Clytia hemisphaerica|type=gene|length=3760bp|location=Sequence derived from alignment at sc0000185:289262..293021- (Clytia hemisphaerica)
GAAAAGGCTTGTAACCACGCTCAAACCAGATTAAACAGCAAGGTTTTCAT
TGCTTGGAAGGTTTGTCGAAAGCTCTATTCGTCAAAAATATAGAATTCTT
AAATGATCAAAAGTGACCAAATTTTTATTGTCATTTTAACGAAATTAAGC
AAAATTCCATATGCTGGGGAAATTGTTTGAGATGCCCTCCCTGAACATCC
TTGTTGGCACGAAATGTTGTTTCAACGCTCATCTAACGTTAGATTGATAT
TTTGGACGTAAGATAGACGCAGTTTAATATTTTTGCCGGTTTTGAATTTT
TGTTTTCGTTTTCGGTATCTGTTGAATGACATTCACTCTCCTATGAGTCC
GCAGTCGACACTCTGTAATTTGGACAAATATAATTCCAATTCCTCTATAA
TTCGAATCTTTTTCTATTTCGAAGAAAATTATTGGTCCGGGAAGATCGAA
TTTAAGAGAGTATTCTTGTTATAGGGTTACGTCGCTTCGAAGAAACAGCA
ATATCTTGTAGCTCAACAAATGTACCAGGAGAAATGCAGTGTTTTATTGC
GTTATTCAATCTTCCAATGGAAAGAATTCGTCTTGCAACAAAAACATGAG
AAACACCTGCTCTCCCAAGCTCATGCTTTTCATCTACAATGGCTGAAGAA
AAAGGTTAATTATTTGTGCCACTCAGAATCAATGTATGGCCAAGTGCTAC
AGACGTCCTTTCTCCGGCGGATTTTCAACAATGTGTTTTACAATGCTCTA
AGTAAGGCTTGGTGAACAGTAGCGTGGTGGCAGGAGGGACAGGGGAGGCA
GTGTCCCCCCCAGCGGCCGATTTCTTTGAGGGGCGCCGAAATACAAAGGG
TGCAAAAAGACTTCTCTGATAACTTATATCGGCGCCCCTTTCCTCTTTTA
CACCTTAGATATGGCAGTTTTCGGGTTGTCAGTGAATATGAAATTCCAGA
CGATTTCCAAATTCTCATATTTGTTTTTACCAGTAAGGACTGTGAGCCTG
AATATCTAATGGTTTAATACCAACTCTGAACTACCCCCGTTTTCCTTTTA
GGCTTTTTCATCTTTAAAATTTTATGCAAGGCAGAAGATCGAGCAAAGGT
TTTGGGACGATGAAGCAACTATACGAACTCAAATAAGGATTGAAAATGGT
ATGGTGTTTTTCTCCCTTTAGTTTTAATTTATCTCTCATGTTTTCCATTG
CTTGTGTCTGGCCTATCAAATGGTTCAACGGCTCGATATTTCTTTAGGTT
TGTGTGTGTTCACTTAGTATTACTAAGTAAAGGCCGGTCTCCACTTGCGC
GCGGTTCGATCGCACATTTTCGAGCAAAGCTTCCACGCCATTGGTCAAAA
GAAAAACAAAGCAACTCCATTGGCGCGATCTGACGTAACGGTTGAGCGCG
CGCTACATTTTTATGACGTAATCTTTTTTCAAAGCAAAAAAGATTGAAGC
CAAAAAGTGCGATCGCAGCGTGTGCAAGTGGAGACCGGACTTATTTATGA
CCGAAGACCGAAGAAGTATTTGTGATTTTAAGTCATACATTAAATTTTCT
TTAAGCTTCCTTGAAAAGATGTTTCATTTATTGGAGGGAACAAACATCAA
TCCAACAAGAAGTCAATCGAAAGACACAACTGGCACATCAACATCACGTT
AAACAGCTGCAAAAGAAAGCACTGTATGGATTGAAAGTCAACGTACACGC
TCACTTAAGAAAGAAGGTATTTTTTGATTGAATTTCAATAGACCTTTTCA
TAAATTACGTCACGAACATCACTTGCTTCGTTTTGAAATTATTACCATGG
TGATTAACTCCCAGCGGATTTTATTAAAACTACTTTCTATTTATTAAAAA
AATCATTTTTTCTCAAGGGACATAATAACCATGGTAATTGTTTAAATACG
ATGCAAGTAATGTTCGTGACGTAATTTATGAAAAGGCATATACAGTTAAG
TTCCATAGCTCGAACACGCACGGGGAATACAAATTTGTTCGAGTTTAGGA
AATTTTGAGTCATGGAGTAAGGTTTCTTCAATACAGTTGAGTTTCAATGG
CTCAAGGGGAAAACAAAGTGTTTCGAGTTGACGAAATTTAGTGTTAAAAT
AGAGAAAACTTGTTCAAGTTAAGGATATATTTGAGCTATAGAGGTTCAAG
TTAAACAGACTCTACCGTAGTACTCGACGCAATCGAGATAAGAACAAAAT
GTCGATTGATAATTAGTCATAATTGCCTGAAATCTTTGTTATTGCTTTTT
ATTTCTGACAACGTGTCTCATATGATAAGTACTTATCCCCCCCCCCCCCC
GGGGGGGGGGGGAAAAATTTTTTTTATTAGAAACCCTTTTAAAAAAAAAA
AAAAAAAAAAAAATATTTTTTTTTTTTTTTTTTTTTTCTGAAAAATTGTT
TTTTTTTAAAAATTTTTTTCCCCCCCCCCCCGGGGGGGGGGGGAAAAATT
TTTTTTATTAGAAACCCTTTTAAAAAAAAAAAAAAAAAAAAAAATATTTT
TTTTTTTTTTTTTTTTTTCTCAAAGCGATTCTCATAAAAAAAGTTTTTCC
CCCCCCCCCCCGGAGGGGGCTACAAGATAAAATAAGATAAATTTTCAAGG
TTTTATATTTAAACTTGTTTTAGGTATTACAAGGAAACTGTATGGTTTTT
TACACATCTAAATTGGAAAACAAATATTTTGCCCTTTGGTATGAGAAGGT
AAGTATTTCGTCCAGAATGAAACCTGGGTCCAAACTCATAAGGCATTGCA
TTAACACACACACGGGCACATTCATGCATCAGACCACTGCAGTTTGTTAA
GGTTGTAGTGAATTGTTGTGATATGGATATGGATCTAATCATATCTGACA
AAATTCCTATAAAAACATGCCTTTTATCAATCGCAAACTTTCAGGCGCTA
TCAATGAGGTATTAATTATCAATTTTTGAAATTTAAAATTTAATTTTCGT
TCAGTACAGACAACTGCAAGAAGAATACAGGAAAATGAACATTGCTTTGT
TTTGGTGGAGCCTTCAACTTCAGAAAAAGGTCAGCGTGATGTGTTTTTGT
TTTCGTTTCGCAGAGTTAGGCTGACAAATATTTTGGCAATCGATATCTTA
ATCTCTTGATCGATTACATCTTCTTGACCGAATAATCTTTTTTGATGCGA
GCCATTAATGAACTCGATTCTCTGGATCGTTTACCCTCTTAAGATTCAAA
GCAACGTCTAGAAATTGGCATAGCTGCTTCCCGAAGTCTTACTCTATACA
TAAGTCTTACATATACTTGCAGATCCCAGGGCTCCTAGACGTCCTGGTTT
TGTTAGATCTAATTTTTGAGGAATTTGAAAAATATATCCTACTTTTCCTA
CTTTTTGAGTATAACTGTATTTGACCTAATTACAAGCATTTTGAAATTTC
ATCCAGATTAATTGAAAATAAACAAATTTTGTAAGACGCACAAGAGCGCC
TCGTAAAATTTGACGAGAAAGGTAATTATTGATACAGTTTTGTTGAAAAC
CGTAGATATATACAAATTTTACTTATTTTAGTCCTAATTAGTCCATATGT
TTTAACCAAACATTTCCTATTATACTAACTAACTAGCAAAAAAATTGACG
GGGAGACCTGAAGTTCTATCAGTTCTGTGAAAGTCTGACCCTTCATTTTA
GGTGTTTGTTGCTTTGAAGGACAATCGAGAACATTGCTTGAGGAAGAAAC
TGGAATACAAACAAGCACTTCTATTTCGTCGCCAAATGCTGGTCGAAAAA
GGAATCACTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014324TCONS_00014324Clytia hemisphaericatranscript
TCONS_00014323TCONS_00014323Clytia hemisphaericatranscript
TCONS_00014322TCONS_00014322Clytia hemisphaericatranscript
TCONS_00014321TCONS_00014321Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014321-proteinTCONS_00014321-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:289262..293021 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.12	8.64	9.62	7.2	7.33	6.04	7.28	8.78	5.34	4.29	5.13	6.64	4.23	4.96	6.22	7.87	5.57	6.97	5.75	4.34	3.46	4.74	4.81	5.18	6.74	7.81	2.2	0.85	3.36	3.17