XLOC_007053 (gene) - C. hemisphaerica

Overview
NameXLOC_007053
Unique NameXLOC_007053
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000145:479028..484179-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007053 ID=XLOC_007053|Name=XLOC_007053|organism=Clytia hemisphaerica|type=gene|length=5152bp|location=Sequence derived from alignment at sc0000145:479028..484179- (Clytia hemisphaerica)
ACTGCTATGCATGTTTTGGTTTTGCTGCGTACTAATTTTGTTGTTGTGTC TAGCGGGACTAGTATTATAATTTTGTCTTGCTTGATTATTTAATAATTAC TTTGTAATATCGAACAACTGCAGTTTTAAGTTGACATATACAAACATACG CTCTATGTGTAGTTTCTTACTTATGATCACATGGCATTCAAAGAAAATTC ACATACATCATAACCTCAATCACCACCGACAGACAATTTCATTCCTTCAA CCAAAACACCACCCAGTGGAAGTTTGCAAATTCCAACTACCACAACCCTC TACAAGGATACATATTCATTAAAATCATTATGACCTCATTCACCTCAATG CCCATCAACTGAAATAAGCAGAAGTCGAACACCTCCTCCTCCTTCAGTAA TACGCAGTCGACCACCACCTCCTCCTCCTTCAGCGATGCAGAGTGAACCA CCACTTCCTCCTCCAGTAATGCGCGATGGCCCACCACCTCCTCCTTCAGT AAAACGTAGTGAACCACCTCAACTTCTGCCTTCAGTAATACACTGTGGAC TACCACCTCCTCCTCCTTCAGTAATACGCAGTCGACCACCACCTCCTCCT CCTTCAGCGATGCAGAGTGAACCACCACTTCCTCCTCCAGTAATGCGCGA TGGCCCACCACCTCCTCCTTCAGTAAAACGTAGTGAACCACCTCAACTTC TGCCTTCAGTAATACACTGTGGACTACCACCTCCTCCTCCTTCAGTAATA CGCAGTCGACCACCACCTCCTCCTTCATCAGCGATGCAGAGTGAACCACC ACTTCCTCCTCCAGTAATGCGCGATGGCCCACCACCTCCTCCTTCAGTAA AACGTAGTGAACCACCTCAACTTCTGCCTTCAGTAATACACTGTGGACTA CCACCTCCTCCTCCTTCAGTAATACGCAGTCGACCACCACCTCCTCCTCC TTCAGCAATGCAGAGTGAACCACCACTTCCTCCTCCAGTAATGCGCGATG GCCCACCACCTCCTCCTTCAGTAAAACGTAGTGAACCACCTCATCCTCCG CCTTCAGTAATACACTATGGACCACCACCTCCTCCTCCTTCAGTAATACG CAGTGGACCATCTTCTTCTCGTTCAGCAATACGCAGTGGACCACCACATC TTTCTCCTTCAGCGATACGCAGTGGACCACCACCTCCTCCTCCTTCAGTA ATACGCAGTGGACCACCACATCTTTCTCCTTCAGCGATACGCAGTGGACC ACCACCTCCTCCTCCTTCAGTAATACGCAATGGACCACCACCTCCTCCTC CTTCAGTAATACACTTTGGACTACCACCTCCTCCTTCATTAATACGCAGT GGACCACCCCCTCCTCCAACTTTAGCAATGCACAGTGAACCACCTCTTCC ACCTTCAGCGATACGCAATGGACCACCACCTCCTCCTCCTTCTTCTTCAG CAATACGCAGTCGACCACCACATCCTCCTCCTTCAGCGATGCAGAGTGAA CCACCACTTCCTCCTCCAGTAATGCGCGATGGCCCACCACCTCCTCCTTC AGTAAAACGTAGTGAACCACCTCATCCTCCGCCTTCAGTAATACACTATG GACCACCACCTCCTCCTCCTTCAGTAATACGCAGTGGACCATCTTCTTCT CGTTCAGCAATACGCAGTGGACCACCACATCTTTCTCCTTCAGCGATACG CAGTGGACCACCACCTCCTCCTCCTTCAGTAATACGCAATGGACCACCAC CACCTCCTCCTCCTTCAGCGATACGCAGTGGACCACCACATCTTTCTCCT TCAGCGATACGCAGTGGACCACCACCTCCTCCTCCTTCAGTAATACGCAA TGGACCACCACCACCTCCTCCTCCTTCAGCGATACGCAGTGGACCACCAC CTCCTCCACCTTCAGCAATACGCAATGGACCACCACCTCCTCCTTCATTA ATACGCAGTGGACCACCCCCTCCTCCAACTTTAGCAATGCACAGTGAACC ACCTCTTCCACCTTCAGCGATACGCAGTGGACCACCTCCTCCTCCTCCTT CAGTAATACGCAGTGGAGCATCTACTCCACCTTCAGCAACACGCAGTGAA CCACCTCCTTCTCGTTCAGTAACACGCAGTGGACCACCACCTCATCCTTC AGCAAAACGCAGTGAACCACCTCCTTCTCGTTCAGTAACACACAGTGGAC CACCACCTCCACCTTCAGCAACACGCAGTGAACCACCTCCTTCTCGTTCA GTAACACGCAGTCGACCACCACCTCCTCCTTCAGTAATACGCAGTGGACC ACCTCCTCCACCTTCAGCAATACATAGCGGAACACCTCCAGCTACATCGA CTAATAAATTTTTTGAGCCACCTCCTGGTGTCTCATGGTTATCTAAAAGA AGCAATATGTTTCAACCGACCAAAAGAGAACCCCCTGCACCTGACAATCT AAAAAGTAGCAGTGGTGATTGGCGAGTAAAACTCAAATCATGGACCGTTG AAGATGTTTGCGATTGGCTGAAAGACATTTCTCTGGAAGAATATTGTGAA TTGTTCCGCTTTCATGCGATCGATGGTGTTGAGTTGTTGGAACAGAATGA AGAATCACTAGTAGACGCTCTTAAAATAGGTTGGTTAAAAACGTCAAGTT CTATTCTTTTTTTAGCTGTTCTCCGTTCCCTTCGGCATTTGAAATATAGT TCGGAATGAGATTAAATATTAAATGCTTCTTTAAAATATAGTGACTGCTC TTGAGATACGTTCATAGATCCACTATGGCACTATGTCTGGTCCCAATTTA GGCATTGACCAATTGCTGTCACACTTATCACATAGAAGCAAAAAAAAATA GATTTTACACTAGTTTCAATTGCAGACATAAAACTATTTCCTTTTAGATA ACCTTTCGTTAAGGGCTACAAACATTACACTAATTTTATCACAATTCCCG ATTTCGCTTTGTTTTCAGAACGTATCGGTCACCGAAGGAAGATTATGAGG AATTTAACTAAATTATTAGAAAAAGAAAAAGAAGAGAAGAGAACTAAAGA AAAAGAGGAGGAAACGCCGGACGAATTTCTTTGTCCGATAACTCNAGAGA AGAAGGAAACAAAAGAAAAAGAGGAGGAAACACCGGACGAATTTCTCTGT CCGATAACTCAAGAGTTGATGACTGATCCTGTTATCGTGGCAGGTAAAAA AAGAGATTGCAAATATATAATTTTCACAGCTCTGAATTATAATCACTGTA ATTAATTAGCGCCCCCACCCCCTTGAACCCTATTTTGGGTAACCCTACTG CCACTGCCTTTACGAAGACTGATATTATAATTTGTGAATTTTACCACTCT TTGAAGCATTTCGAAAATCTAGGATGCCTCCTCCCATTAACCTCCAAACC CGAAGGGCTAGACTCGTGACTCCAATAAGTAGTTTCATTTCCCATCCAGA ACGCATGCGCGTGGTTTTTCCACAAACACCGGATTAGAACTAAAAGCTAT CACTAGATTTCAAAAAATGCAGTCCTCCAAAGCAAAGGAACCACTAGATA CAATCAGTAGTCATGATTACAGCTTTTATAAAATATCACACCAGGCACGT GGACTGGAAATAAGGGGCTTCACTTTTTGCTGCCTGGGAAAGGTTCGAGA TTCTACTTTAGCCCTTCGGGCTTTAAACTCAATGCCTCCTCCCTTACAGG GCGTTTCCCTTTGCTTAGGTACCCTTTCCTTAGGACCTTTAATCATCCTA ATCTATTAATTTTTCTTTCTATCATTCTTTAGACGGTTACACATACGAAC GAACATCAATCACTCAATGGTTTGAAACTGGAAACAATAGAAGTCCAATG ACAAATTTACCGTTGGAAAACCGAAACCTCGTTCCAAATAGATCCCTTAA AGACGCTATTAACAGACATCTTGGACAGTAATTCTATGGACACGAACACA AAAATTAAGTACAATTGTACCGGCCCTATCGTACACAACTTGTACACAAT GTATTAATGAGTCTTTTGGCAATCGATCAAGATTCCGTGGGACTTTTGAT ATTTTGATCAAACTGATTTGATAAAACAAAACGTAATGAACTACCATTTA GCTATATCAACTTAAAAATTTATTAGATATAACACAGTTTAATTTCGATA ATTTGAATAAAAAAACTCGCAAATAAATACACTTCCATGAAACGAAAATA AAATCCAACAATTGTTAATTTTTCTTAAAGAAAATAGTTTTTATGAACCA AAACAAAAGGCCATCATTGGTAAATTTCTTNTTGGAATAACTGCAAGGGT GGTGGTGTTTGTAGAAAATGTCCAAAATTGCAGTTACTCCACATAGTGTT AAGGAGTAACTGCAAGACCCCCCCCCCTGGTGGACTGGAAATGAGGGGCT TCACTTTTTGCTGCCTGGGAAAGGTTCGAGATTCTACTTTAGCCCTTCGG GCTTTAAACTCAATGCCTCCCTCCCTTACAGGGCGTTTCCCTTTGCATAG GTACCCTTTCCTTAGGACCTTTAATCATCCTAATCTATTAATTTTTCTTT CTATCATTCTTTAGACGGTTACACATACGAACGAACATCAATCACTCAAT GGTTTGAAACTGGAAACAATAGAAGTCCAATGACAAATTTACCGTTGGAA AACCGAAACCTCGTTCCAAATAGATCCCTTAAAGACGCTATTAACAGACA TCTTGGACAGTAATTCTATGGACACGAACACAAAAATTAAGTACAATTGT ACCGGCCCTATCGTACACAACTTGTACACAATGTATTAATGAGTCTTTTG GCAATCGATCAAGATTCCGTGGGACTTTTGATATTTTGATCAAACTGATT TGATAAAACAAAACGTAATGAACTACCATTTAGCTATATCAACTTAAAAA TTTATTAGATATAACACAGTTTAATTTCGATAATTTGAATAAAAAAACTC GCAAATAAATACACTTCCATGAAACGAAAATAAAATCCAACAATTGTTAA TTTTTCTTAAAGAAAATAGTTTTTATGAACCAAAACAAAAGGCCATCATT GGTAAATTTCTTCATCTACGTATTTTTCATATCAACAGTTTCAACTCCAA GCCGAGTCCAAAATATAGTATTGCGTTCGTAATATTTTAAGGTCTTGATA TA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012575TCONS_00012575Clytia hemisphaericatranscript
TCONS_00012574TCONS_00012574Clytia hemisphaericatranscript
TCONS_00012573TCONS_00012573Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012575-proteinTCONS_00012575-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145supercontigsc0000145:479028..484179 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.53 0.32 0.33 0.2 0.64 0.84 10.71 12.37 12.72 14.94 13.57 13.86 8.97 12.59 6.96 6.76 8.29 11.56 28.41 17.05 18.4 16.19 8.34 8.66 16.37 13.2 5.39 9.15 2.53 2.63