XLOC_003494 (gene) - C. hemisphaerica

Overview
NameXLOC_003494
Unique NameXLOC_003494
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000063:39552..43616+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003494 ID=XLOC_003494|Name=XLOC_003494|organism=Clytia hemisphaerica|type=gene|length=4065bp|location=Sequence derived from alignment at sc0000063:39552..43616+ (Clytia hemisphaerica)
TTCGGAGAGTGATGTTATGTGAAGTTATTGAAGAAATGTGTTATCAGAGT
TATTGAGTATATCAGATATTATTTATGAATATGGATGAAAAAGAACATTT
ggagaatttgaaaaacttaTGTCGTCTTTGTCGGATGAAGGCAGTATCTA
TAAAAGGCTACAAGGAGGTGAAGCTTGCTTCCTCATTCAGTGGTCAAATT
CAATCTTTGTTTGGGTACGACTTGAAAGATGACAAAGATGGAGTTCACCC
AAAGAAACTTTGCAGCTCTTGTGTGAGAAAGCTCCGAGACATTAATGTTA
CAACCCCCATGCACGAGAAGCAAGAGATTGCCGAATTTTCAGTCCATAAA
AGCAAGGAAGACTGTCCATTATGCTCAAAAACAATGACTGTGTTAAACTT
TAAAGTAACACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAAGATAG
CAAAAGAATTGGGACTGACAGAGTTGGAAACAAGGTCGACCGCAACATCG
TGTACAATGTTACGGCCCGTGAAATATGATAGAAAACCTTCTGACGACAC
ACAGGCATCACAAGAAGAGAATCCAGTTAACCCGTTTTACGTTGACATTA
CTATTGACATCAAAGCAGACCCTGCAGGAGGATTTTTGTTTCAGACTTTC
GTTTATGAGAAAACCAAAAGTTTTGGTGATGGATTACCAACAAAACTGTC
ATCTATAGATGATGCTAAACAACTCTTTGGTCACATTTTAAATGCCAAAG
TATGTGAAGGGAATGTTGACACTGATCTCCCGAAGTTGACCACCAAAAGA
AAGGAGAATATGAATGAAAGTAAAACATCAACTCTTCTAGAGACTCCAGA
GCTGAAGCAATTCAATAAGGTCCGTACCACAATTCGCAATCAGAACTGCT
CCCTCTTAACCAAAAACGAAAAGCGATGCAACGAATGCCAGAAGAGTCGG
CATGATCTTCAGAAGATGGAAAGACGACAATCGATCGAAGCCAAATCAAA
AAAGCCACATGCAGCAATGACAAAAGCTGAACTAACTGATAAACTAACCA
AAGAGTTGAAGCGGAAGCAGAAGaaacttgaaaagaaaattgaaaaactt
gttaaaaagGAAGGTGTTGTGCTTCACGAAGAGGACAATGAGCCTCTTGT
ACGGGCTGTTGTCAAAAACGAGGAATGTCCTTTTGATAAGGGGTCTGCAA
TGGCTTTGCTATGGCAGCAGCAGAAAACAGCATCCCACTTCAAAAAACCC
ACATCAATGAGGTGGCACCCTGTAATCATCCGATGGGCTCTGAGCATTTA
TTTACGAAGTTCAGGTAACTATGTCTATTCATGTCTACAACTGTTAGTTA
CTAAATGAAAATCTGGTCAAAGCTATCATGACCTTTTTTATTCCAGTGAA
AATgatgtattttcttttttttgttggtAATAACTGCTTATGATTCAATC
TACtacttttatcatttaattATCAACCTTTATTTACATTCAAAATTATA
CTACAAAGAATTTTATGCAGAGTTTTTGGTTACAATTATTGGAGGAAATA
ACATCAATATATAATAAGTGATTACTTTTATCCTTCTGTGTCTGCTTGAG
CCTTCTGGTTATCATGTTTGATTTTAGATATAAATAGAATATAGTTTTAT
CGAACGATAAGCTCaaaagataaatttttcaaaccaaTTTTGCTAATTTC
ATGGAAATCAGTGTGAATATTAAAGTCAGTttgttgtaaaaaaagaaatg
tataaaaagaaaaaaaatatattgattaaATGAACAAAAGGACTGAGTCG
TCAGAGAGGTATAaccataattttttttactgttgAAAACATGTTTTACA
TAGGAAAATGTCTTTCATTACTTTCAGGTACCTACGAACAAATACGTCAA
AGTGGTTTCCTCACGCTACCACACAAATCCACCTTACAACAATACACTGG
TTTCACTGACATCATGACATCATTCAATCCAGATATTCTCAAAAAGTATG
CGGATGAGATGAAACTCTCTAAGTTACCAGAATTTATGAGATGTTGCTCG
TTGATGTTCGACgagatgaaaataaaatcagGACTGGTCTTCAGCAAGGC
CAGCGGAAAGATCATTGGCTTCACTGAAATTGGTGACCTCAATGACGAGA
TTTCTTCTCTTGAAAGAAGTTTAAGCAAGAAAGAGAAATCTCGAACAATG
GCATCACATGGTCTCGTATTAATGCTACGAGGCTTTTTCAAGCACTACAA
TCTTCCGATTGCTTATTTCGCCACAAAGTCTGCATCAAGTGAACAACTTT
ACTCTGTCATATGGGAAGGAGTCCGTGTTGCTGAAGCAGTTGGCTTTAAT
GTCCATGCTCTCGTTTGTGATGGTGCTTCTTCTAATAGAAGCTTCTTTGA
GATGCATCGAATGGAAAACGGTGAAAATGTCTCAGTCGATGGTGTTGTCT
ACTGGTCATTTAACCCTTGTCATCCTGTCCGTAAAGTTTATTTCATCAGT
GACCCACCACATTTGATGAAAACACTCCGAAATAATCTTGAAAACTCTGG
TGGAAATAAAGCAACACGTACCCTTATGGTAAGTCTAAGGCCTCCACACC
AacatgatgaatttttttgggGGAAAACATGGAAATTCAATGATGGGTTG
ATGTTGATTTTATAATCTGGGTCGAGCCTTGGATTGTTTCACAGTTATTC
TGGTTTCCAGCAAATAAGTCCACATATTTCTTTAATATtctaaaattctt
ttttcagaaaaatggtCAGCATCTATCTTGGAACCAAATCCGGATTCTCT
ATGAAAAAGACTTGAATATGAATGCTGCTCACCCTGGATTGAGGAAACTT
CACAAACTCACGAATGATCATGTTAATTTAGGACCGAGAACTAGAATGCG
TGTAAATTTAGCGGTCCAGGtaagtaatttttcaattttttcaaatcttt
tttatgtAATTCATATATAATTTTTGCTACTTCTAAAGCATATTATAATC
AATGTTTTGCACAATTTTTACGTCTGAATAATTTTTGCTAAGGTTTTTTC
TATATTCAGACTTTCAGGTTCCTAGTATGGCTGCTttattaaaaagttaa
gaaagttcaaaaaacacgttttcgtttttttcaacATTGCTTACTTTTTT
CCTTTGGCCAAACTGAACCAAATTActgtagtttgttcttttacTGGCCA
AGCcactaaaatttttattttgtaattctttttggggtaaattttttcta
tttgtttttttacttttaggttCTCAGTAAGTCTGTCGTTGATGCTCTTA
TCAAGCAAGGCTACGAGTCCACTGTGGAGTTGCGCAAATTCATAAAGTAC
TGTGACAAGTTTTTTGACATCATGAACATACAAAATAAGACTGCTTggtt
aaagaagaaaaaaccaaATTTGAAACCTTTCGAGAAACCGAAGCCAGTGG
AACAGCTTAAACCCGGTGAAGAGccagaaaaaagattttgggtaAGTGTA
TTGACTCACTTCTTGACATACCAGCTTTTAAGGCATCGATGACTATCTCA
TTTCCAAAATGAGTGTATTGGTGTGTGAAACAATAAGCGACATCGTTTGT
GTTTGGATTTCCCTTATCAAATACTCtttaaaactcaatttgaaTACTCC
TGGTCTGATGTCTACCTGGTGGATTCTTAGGGTAgggttttttggaaagt
ttgatACTGTATGTTACTGGTTGTAATAGACTTTGCGAGTTATgcgtttc
ttttgttttgatagtaTTACCAAATTTATCcatttggcattttttagtAA
GCTCTTTCAGTAACAGGGTTCGTAGTCTTTGGCAGAGGAAGTCTTTTTCC
TTACAAGGACTATTTacagaagtcataaaaaaatacaGTGTTTTGATTGC
CGCTAAGATTCACcaatattttattgtttattttagtGGCTTGAACACAA
ATTCCTGAAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTTGAATA
TGCCTCCAGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAATACAA
GGATTGCGTATCACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006119TCONS_00006119Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006119-proteinTCONS_00006119-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:39552..43616 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0.01	0.02	0	0.02	0.02	0.04	0.06	0.01	0.02	0	0.02	0.03	0.01	0	0.01	0	0	0	0.03	0	0	0	0	0.03	0.04	0	0.02	0	0