XLOC_002085 (gene) - C. hemisphaerica

Overview
NameXLOC_002085
Unique NameXLOC_002085
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:329424..335374+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002085 ID=XLOC_002085|Name=XLOC_002085|organism=Clytia hemisphaerica|type=gene|length=5951bp|location=Sequence derived from alignment at sc0000031:329424..335374+ (Clytia hemisphaerica)
GAACGCGATGTATATCATATAGGAGTAGAGGATAATTGAGTTTTTGATGA TTAAGATTTAAAGATTCGAACAAAACTAAAATATGTCGGTCAGAATAAAA TTCAGGGTGAGTGTAATTAATTGCTAAGGTATTATAAGTATTATACGTTT TTATCAGGAGTTTGactgaaaatttgcaaaatttaaaagaagttGGTGCA AAatcgattttcgtgatacaaAACACTACTGTAAAATTTCATGGCATCAA AGTTTAGTAAAGTTTTCATACCTTAATAACTGGGACATGCACTGAGTCGG GGAAGTGGAATATTTATGTACTCGAGTAATGAAAAGCTTAGGATTGTTAC CAGAACGAACCAAAAAACTTTGTTTGTATTACAGAGAatgttataaattt tattgtaCTCTTCTATCTTAGTATTTCCTGATTCTGATCAGTGCATTGGC GATTTATTATATGGCAAAGAATGGAGTGTGGGTTAGTCGAATTGTCAGTG ATCAGCAAAATAATGCGGTGGAGATTCAATCGAAAACCAGTAAGTTCTAT GCCAAGTAATTCATTCAGTTGCCTAGCTCTACTCCATCTTTAAGGGAAAA TAATTTAAGGTagagtaagtctgcgaccgcagtcggaggcggcCTGAAGG CTCcactttcgatagctatctacccaaaggtaggaaagggcgccactctt tctcccttgattgctccacttacccttgatccttctcttaattgctgagc atcaagcagagaggcttcaagtaccattttggaaatctttggtatgaccc ggctggagGTTGagcccacaaccttgcgaaccgtagccggatgctctacc actgcactacacGGTCGCTTTATTTAATCAAAGAGAAGAGATTTAAATTA CTGAGCGTGTACGTTTCTAAGTGAGGTGATTTCGCCATGTTATGCATTTA CGTATAAAAGAGAATCTAAATTCCGACAATCGTAAGGTCTCGTTGAATAA TTCAGGCTATTTTTCCAATACAAAACCtctttgctaaattccgttttccG AACTAAGACCACCCATACTTCCATCTACTGACAGTTGGTTTACTTGCTTA AATTCTGAATTTCACACAAAATTCGTAAGAATAAAGAGGCCTAATTCCGT TCTTCCTACAAACGGAGAAAAACTCCCCATCAATAACTTTATCTGGCTTT ATCAACTTACTTCCCTGTTATGGTGGTGTAAGTAGAAAATATTCAtgatt tctttaatttctttagATGAAGCATACACGTTGGATTCAAATCAAGGTGA ACAAAAGTTAACAGATTCTTCAGACAACAACAATGCCAAGAGACATTTCC CATCAATTCAGCCAACAACTTCAACCTCAAGACCATTGCAACAGAACCTC ACTATCACTGAAAATGAAGCCTTGACACCAGAAGATGCTGGTGAACCATT AATAGGGAGTGATAAAATCAATACAAACGAAAGAAATCATTTCAATACAA ATGGACAAGAAAAGATAAAAGTTGCTGAGAAAGATTACGAAGAAGTTTGG AAATCCTTAAAGTTTGGCAATTTGCTCAACGAGGAGGATGGAGAAAGTTC TGTTCCGGAGGATACCAATAGCTCAGAAAATACTAACAATTCTTCAAATA TAATGCAGCTGGCATCAAACCTACCAAGGGAATTTAGCGAGGATGCTGAA AGTTCAGAAATAGAtcacaaaattcaaaatactCGCCCGTTGCAAAGACC CATACAAATACAAAAGATCGAAGAGCAACCTTTAACTGAGACTGAAAAGA ATATTAATCAAACAAATCACGTGGCTACCAATGAACACCCAACCAATGGG GATAACGTTTCGCAAGAATCCAACGAACGAATCAACCAACAGAATCAAAC TGAGGTTGTTAACAATGAAGATCTTGATgtacaaaaaactttcgaaccCT CGCCATACGAGAAAGGAAAGCTCACCGACGCTAGTAACCAGGGTGTAATT CAAACAACTGGATCCCCACTAGTGACTGCAATCAGCTCTTTGAATCAGAA TGTACCAGGCAATGATCAAAAGGACAATGAAAGAGACTTAACAGCACCGG ATGATATCGAAGATATGTTTGTCATCGAGGAAAGCAATAGTACAGATGGA AGTGTAATTGTTGATTCGACTGATCAGTCGACTGAAGATTCAGTTATTAA GTTGTCTAAAGGATCTGGTGATGTCCTATCCACAGATAACGACGAAGAAT TTAATAAGACACAATCTGGAAGAGACACAATATCTGATATTGAGGTAACT AAAGGAGCAGGAAAACCTTATGATAAGCTTCCTTCAAGATTGAGTGAATC TGATATTAACTTATCCGGAAAAACGGGAGAATATGTTAATACGCTGTCCA CAAGTAATAATGAATCTGCTTTCAAAATGAAAGGAAAGACGTTTTCCAAT AGTGTTACGGCAGGAAAAATTCACCAAAAGCCATCTCCAGTACCTCTACA ACAAACCGATTCAGATGGAAACCAAAATACTTTCACAAACTCTATCACGA TACTAGAGTCCCTTAAGAAAAACATTGTTCAACCAGGAGCAGTCGTATCG GAAAACCAGCCTAAAGACCTAAGTGCTGCAAAGGCTATCCAGGATGGCAC AACAAGCCAAGAAACAAATCACCAAAAACCAAGTCTACAAACACCAATAG AAAAGGAAGAACCGCCTGCTACAGAAATTAATCTAGAATTTTCAGACATG AGACCACAAACTCTGGTCAATACAGCTGCCTTTCTTTCACCAGTAGATGG CAAGTTTATAACACCAGGAATCAATGATGGTTTAAAATCCAAAACTGTGG CTGATCCAACTATAATAAAGTCTGAGAATACTGTAAAACTTGTGAAACAA GATCTCCCTTCTTCACCAATAACCCCACCAATAAAAGCAGTAGATGAAAA GATTATTTCACCAGAAATCAATGAAGATACAGAGGCTCAAAGTAACCTTG ATGAGAATTGTGAAGACAGTATCCATTCAGTAAACCAACCAACAACACAT GGTCATTGTCTGTTTTATTCTGAATATTTCAACACCTGCGATAAAGGGAA GAAATACTACCCCAAGAATGAAAATGAGAAAGAATTGAAATGTAAAAGTA AACAATATAAGGATCTATGTCACTTTAACCAAAAGACAGTTGGTCTGAAA TGCAACACCAAAAATTGCGCTAAAGGAACGCTTAAAGTTGGTATTTTTAA CAAGAAGACCGGACATTTTGATTATCTGAAAGtggaaaatgccaaaaact tGATTCTTGTTATTCGCAAAGAGATGTCAAAATGGAATCGATTTGCACCT TTCATTTTTGTGTCTTGCAAAGCTCGATTTCCACAGAAAGAAAGAATCAG GCAGATTCTGACATTCCCAGAGCCTcataaaccaaaaaaaaatcaaccac CAATAATGAAACAACCAAACATTAATATTTTAGTGATCGATTCTCTTTCA CGTCAACATTTCTACCGAATGCTTCCAAAGACGGTCAAGTCATTACGAAA TATCAACAAAGCCTCTAAGAACCCATACTCGGTGACTGAAGCTTTAGATT TTAAGGGAATGCAGAGCCTGGCGCCATTCACCTATGTAAACATTCATGCT CTGATGAACGGGACTATCGATAGGAGTAATTACAAACGTTCGAAAAACTA TAAACGAGATTACCCTATACAGAAACTGTTCGCAGCGTTCAGGATGAAAG GTTATCGGACGTTACTGCAAGAAGATTCTTGTTGGCATGATAAATGGGGC TCACTTTTGTCTGGTAAGTATATGTTATTAAGTTATTACAATTGACGGGC AATAAACTTCTCAAAAGGTGTCACTGCATAGTTCCAGCCCCCTCCCTCTC TGGGAGAGCGCCTGTTTTTCAAGGGGTCTGCCCTTTGCAAAGATAACTGA GCCAATGTTTGCCCAGCCTATTGTCTTACTGTTCCATatgaatatttaaa tttttcgaAAGTCATTATTTAACAACAAGCACTTTACCCATTTGTAAGTC TGATTTACAACCAAACTCTGATAATGGAGGCAGGAGAATAGAATTGATAA GAAAAAAATGCATGTTTTCTAAGGTATATTTTCTAACGAATTGATAAAAT TCGTTTGGTATAAAGAGCATCTTGGTCGACAATTTGTCCTCGAGTTTTAA AAAACTATCTTTTATTATCAATTCCTTTTCGCACAGGTAACGAGAAGATC CAAGACTCGAAATCGAAGAAAGTGCGCAAAGAATTATGGGTAGACATTCA AGATACCATCACTAAATGGGGAGTCCATGATCTCGGTTTAACACATATGA CATGTGAAGCGTTAAAGAAATACGGAATGACGAGTTTATTCGACACACAC AGAATGCTATGCATGAACGGGCGCTCCATTAGTTCTTACTTCATTGATTA CCTGATACAGAGAGCCGTAGATAGCCTGAATACAGATCCTCTCTTATCAT ACACGCATATCAATTTCGGACATGAGAAAACAGGGAGACGTATTAAAGCT CTTGATAACGATATATCGAGGCTTGTCCGAAAATTAGAACATAAGGAGAA CACAATAACTCTAATAATCTCTGATCATGGAGGGAAGCaatcgaaatatt cgattaatACGATCCCAGGTCGCTACGAAGTTTACGATTCGCTTATGTTC ATGGTTGTGCCGAAAGCTTTAAAACAACAAATTGGAGATGAAACGTATAc aactttaaaaacaaatcaaaactcaTTGATAACTGTTTTAGACATAAGAG ATACATTCATAAAACTGTTAAATCTGAAAAACATAGTTCCAAACTCACTC CATGAGAAGTCATTGTTTTCAACAGCTCTGGCTGAACGTCGAGATTGCCA AGATATAGGAATACGTAAATACGCTTTATGTAAATGTTTATCAAATATCA ATCTGTTATCACCGAAAGCAGATAAATATAAGGACTTCTTGGTATGGCTT GGTGAATATGCTGTAGGacaaataaacaacaaaatctCAGGATATCTTAC TGGTAAAGATACTATAGCTGCCAAGAATCCCAGATGCACGAGAATCCAAG CTGAAAAAATAAGACTTGTTATTGAAGAGCAGAATCAGAACGGTGTTGTA TATACATTTGATATCATGACAAAGAAACAAGGACCGGAATAtgatatatt caattttcgaaTCTATTTCAATAGCAAGAGAATGGCCAATACCTCTTTGG TTGAGATCTTAACATGGACAAGAATCTCTATGTACCAGAAATACCAATAT TGCCATGATCGAGATGTTCCTTTAGACTTGTGTATTTGTACTGGGAAAAG TAGATTCAAGACTTCAAATCAAACTAGTTTGACACATTATCACCAGTTCG GTAATGTTGCAACCACCAGATCTATTAATGGTATTCATTGCTTATTACTT CTTCAAAGAGACAATGTAAATGTGGTGACTTTTGAGGTTCTGAATCTATG TGAAAGAAAGGTTTTACTTGTCTTCAATGTCAAGACAATACTTTCTTGGC AAGTTAGTCAACGATTACCAATTGAGATGACTATTTATCCTCAGCATATC AAATTTGCAGCAACCTTTTTGAAAGGACTGGTGACGATAAATGAGAGGAT TGAACCAGTTCTAATCGTGAAATGGGAGTGAAGCATTTACCTCTTAACAA CTTTAAGGAAGTAAACATATCGAAATTACATGACGAACTGTATGTAAACA AATTCTCATATGTAAATTATACAATTTTTAGGGCTTAAAGACATTATCAT TGTTTCTTTCGTAAATATCATGTAATATTGAAATAATCTTTGGCATTTTA TGGTCTTTTCTACACCACTATCTCACAGACCCAcagggaccccttcccac tggaaaattggccaaaatatcgtcccggtgGAAATCATACTCCAATTTTC G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003730TCONS_00003730Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003730-proteinTCONS_00003730-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:329424..335374 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 2.09 2.06 3.06 2.84 0.51 0.23 2.01 1.08 1.3 1.05 0.61 2.53 1.25 1.1 0.02 0 0.87 0.77 0.5 0.36 0.64 1.08 0.05 0.04 0.01 0.02