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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011193 ID=TCONS_00011193|Name=TCONS_00011193|organism=Clytia hemisphaerica|type=transcript|length=1157bp
tttcgaaaaaaaatgccTCAATAATAATTCAATTATTCACAAGTGATAta
tctaaaaattaaaatattaaaaaggaATAGAAAAGAAGTGATGAAGGCTT
TTGTAGAAGTCTCAATTACCAGTGTAGTATGGCAGTAGTATGTCCTTCCC
ATAATCCAAACCTCTttatttaaaaatgacaattaaaataattcgccaaa
attaaaaaaaatatggtTTTAAGGTTTAAAGGGCATCAGACTGGGTAAAA
AAGATTATAAGGTAAAAGTAATATTTGTCACTTTCGGACACTTCCTACTG
GTAAAGTTTGCAAATACGGGACCCTTACTTAAAGACCCTGCGTTAGACTT
ATTTTTTATCTTGTGTGTTTCGTGACCCAAGAAGACTAAAGTGAAACGAT
ACTCTGTCCAGTGGAAACGGACTAATAGGTTTtgaaacattgagtttcaa
gcccgaagggctagaggcgagactcctggatgggaaatgaaaccacttat
ttcccatccagaacgcccacgCAACTACGTTACACAAACTCCggattgaa
attaaaatctatcgctagattttcaaaaaatgtagtcctccaaaacaaag
gaatcgcttgatacaatccgtcgtcatgattacgacgcgttctatgcgcg
ttttggatgggaaataagtgccttcaatttctcttgcctgagaagggtta
aagtttcgcctctagcccttcgggcttgaaactcagtGTTTTAAAACGAA
CATAAATCTCACAgaacaaaacaatttgaaatactATAATACAACACTAC
CGCAGTTGNATGTTTTAAAACGAACATAAATCTCACAgaacaaaacaatt
tgaaatactATAATACAACACTACCGCAGTTGGCATCAACATTTTTTGAA
CGTTCATAACACGTTATATGGATGCCATGGACGTTCGATGGACATATTTA
TGACGTTCTATGCTGCCAGCTCGGCCTaaatttataatatattttagTTT
TTGTACAAGGTCACTATAAAATCcgacaaaaaacaaaattaaaaaaaatt
ctaccgtagatttctttaataaaatataatatctgtataaaaaatattct
tctGTTTTTCCCTTTACAGTAATTGTTTCAATTAGaaattgatgaatttt
tcataaa Run BLAST on NCBI transcript from alignment at sc0000122:299007..300163+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011193 ID=TCONS_00011193|Name=TCONS_00011193|organism=Clytia hemisphaerica|type=transcript|length=1157bp|location=Sequence derived from alignment at sc0000122:299007..300163+ (Clytia hemisphaerica)
tttcgaaaaaaaatgccTCAATAATAATTCAATTATTCACAAGTGATAta
tctaaaaattaaaatattaaaaaggaATAGAAAAGAAGTGATGAAGGCTT
TTGTAGAAGTCTCAATTACCAGTGTAGTATGGCAGTAGTATGTCCTTCCC
ATAATCCAAACCTCTttatttaaaaatgacaattaaaataattcgccaaa
attaaaaaaaatatggtTTTAAGGTTTAAAGGGCATCAGACTGGGTAAAA
AAGATTATAAGGTAAAAGTAATATTTGTCACTTTCGGACACTTCCTACTG
GTAAAGTTTGCAAATACGGGACCCTTACTTAAAGACCCTGCGTTAGACTT
ATTTTTTATCTTGTGTGTTTCGTGACCCAAGAAGACTAAAGTGAAACGAT
ACTCTGTCCAGTGGAAACGGACTAATAGGTTTtgaaacattgagtttcaa
gcccgaagggctagaggcgagactcctggatgggaaatgaaaccacttat
ttcccatccagaacgcccacgCAACTACGTTACACAAACTCCggattgaa
attaaaatctatcgctagattttcaaaaaatgtagtcctccaaaacaaag
gaatcgcttgatacaatccgtcgtcatgattacgacgcgttctatgcgcg
ttttggatgggaaataagtgccttcaatttctcttgcctgagaagggtta
aagtttcgcctctagcccttcgggcttgaaactcagtGTTTTAAAACGAA
CATAAATCTCACAgaacaaaacaatttgaaatactATAATACAACACTAC
CGCAGTTGNATGTTTTAAAACGAACATAAATCTCACAgaacaaaacaatt
tgaaatactATAATACAACACTACCGCAGTTGGCATCAACATTTTTTGAA
CGTTCATAACACGTTATATGGATGCCATGGACGTTCGATGGACATATTTA
TGACGTTCTATGCTGCCAGCTCGGCCTaaatttataatatattttagTTT
TTGTACAAGGTCACTATAAAATCcgacaaaaaacaaaattaaaaaaaatt
ctaccgtagatttctttaataaaatataatatctgtataaaaaatattct
tctGTTTTTCCCTTTACAGTAATTGTTTCAATTAGaaattgatgaatttt
tcataaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011193-exon-sc0000122-1491911889:299007..300163 | TCONS_00011193-exon-sc0000122-1491911889:299007..300163 | Clytia hemisphaerica | exon |
| TCONS_00011193-exon-sc0000122-1510915933:299007..300163 | TCONS_00011193-exon-sc0000122-1510915933:299007..300163 | Clytia hemisphaerica | exon |
| TCONS_00011193-exon-sc0000122-1575043694:299007..300163 | TCONS_00011193-exon-sc0000122-1575043694:299007..300163 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122 | supercontig | sc0000122:299007..300163 + |
Blast
The following BLAST results are available for this feature:
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