TCONS_00010929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010929
Unique NameTCONS_00010929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3255

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010929 ID=TCONS_00010929|Name=TCONS_00010929|organism=Clytia hemisphaerica|type=transcript|length=3255bp
caagAGCCATTCAGAAAtaaagataaacaaaagaaGATTGTTATGGATGA
AGTGGAAAATGCTGAAGTTCTTCTACAAGGTTCAAATAATGTGGAATTTG
ATGTAGAAATAGCATTACGTGAAGAAAATAACAATTATCTTAACAGTGCT
GAAGGAGGTATTGCTGAAGATTTGGCCTTCATTATGCAAAACGCAGCACT
TCATGACGATAAACCAGTTAAAGTTTTGAACATTGCAGATTATAGTAGTA
GCAGTGATTCTGATTCTGACGGTGATACCACAACGTCATCATCGTCTGAT
TTGGAGATTGTTGAGAAACCGAAAAAGCAAAAAGTCACAATTTGCATCAT
CAGTTCTGATGATGAAACCATGGAGACAGAACAACAAACTGagaccaaca
acaataacaaaaaagaagaaaatattgaaGACTGTTGCAAATATTTGATG
AAGGGTTTAGTTGAGAAAGTTGTACGTGAAGAAAGACGAAACAAAGGGAA
AGATTCTGATGACTCTACCGATGATGAAAGCGAACAACAATTCATTACTC
AAGATGACCGGGTGAATTTGGCTTCGATTGTTAGCAGCGAAGAACGAGTT
GCTAAAGAAATACCAAGAGTTTTACATGAAGTTCTTCCTGAGGAACTTGA
GGTCGAAGAAGAAGAAGTGGAACTATCTACTGAAGATACACTTGTCTCTA
TTGGCGTTGTCTCTGGTGTTGTCGAAAAAATGATTGTCTTGGAAGCCAAA
AAGGATGCACCAGCTCTAGATGCTGACACTGCACTTTTTCTCAGCAAAGA
TAAATATCTTGGAAAAGTTTTCGACACGTTTGGTCCAGTAAAGACACCAT
TTTACAGTATTCGAGCACCATCCAAACTTGACTGCACTCAAATTGCCAAG
GGAACAAAAGTTTTCTTTGTCCCATTTAATCAGAATCTGACTCGTTATAT
TTTTGTCGAAGAATTGAAAAAATTGAAAGGATCTGATGCATCTTGGAAGA
ATGACTGCGAGCCACCTCCAGAGTTGTTGGATTATTCAGATGATGAACAA
GAGAGAGAAGCCAAGAAGAAAGGAAAGAACAGAAAAAGACAAATGTATGA
ACAGAACGAAGAAAACCAACAGAACAGCAAAAAACAACCTTCAGCATCAA
CTAATCGCAGACAACGAAAAATGAAAGCTATCGATCTCACAAAACATGGG
AACCCATTACTGGATCATGCACGTCTAATGAATGATCCAAGAGCCAACAA
AGCGGCCGCACTGACGCCAAGAGAACCACCACGACAACAGGAAGTTCCTC
TTTGCGACGTCATGCCCATCGAAGTTAATGATTATGACAACTCAAAGATT
ATGCAAGAATCACGCTTAGATTACGTGTCTCCCTTACACAAAACTAATCC
TAAACCAAAATGGTCTAGCAATGACAACAACAGTTCAAGAGGTAGAGGTC
GTGGACGAGGCACTGGACCATCGACGCAAAGACAAGGGTCATCGTGGAAC
AGACAAAACTCTCACGAACAACAGCAGCAACCGAATTTCAACCCCAATCA
CCAACAAAACACTAATTCACAACCACCTCCTCCTCCAAATGGTCCTCACC
AGTTCCATCATCAACCAAATTATTCTCAACCTCCTGGGAACCAATATCAA
TATCAGCCACCATATAATAATTCACAACCTCCTCCGCCACCACAGAATTA
CCAATGGTCTCAACAAAATTCCCAACAACCTCCTCATCAAATCCAACACC
AAAATCATTATTCTCAACCGCATCCGAACTACCATCAAAATAACTATCCA
CCACCACCAAATAACTGCCAGCCCCCAAACAACTATGGATCTGCGCAGAG
TGGTACACAACCACCCCAGAGCAACTTTCAGCCACCACCAAACATTCCCC
AACCTCAAGATAAACCACAAGCACAAGCTCCTAAAGAAAATTCTCAGCCA
CCAAATGAATCTCAGAAATCGAAAAAAGAAGTTCGTCATCAGTACAATCC
GTCTCAAAATCATCCTTTGTTGCGTCATCAATCAACTGGTGAAAAAGGAC
CAATGAATGACGAGGGACCTCAAAGTCATGGGCCCACTTCGCATCCAAAA
AACCAAGGTCCTAATCTAAATCAAAGTCAAGGTCCTAACCAACCTCAACA
AAACCAGTTTCCGAACCCGCCCCCACAAAATCATGGTCCGAACCCACCCC
CACAAAACCAAGGGCCCAATCCACCTTTGAAAAATCATGGCCCTAACCCC
CATCAAGGTCATGGTCCTAACCCACCACCACCAAACAACTATCAAGGGCC
GCCTCAACACCAACCTTACCACCCTCAGCCACAAAACAACTTTGGACCAC
CGCCGCCGCCTCACCAAAACAATGGCTGGaatccaaatcaaaacaaccct
CCTTACATGAACCAACACCCGCCCAATTATAACGCCCGACCTCCTCAGCC
ACCCAATCAACAGAATGGAGGACCAGGCTATCATTACAACTACAATCAAC
AAACCTATCCGAACCAGGGGCAGCCATCAAACTGGAACCATCAACAACCG
CCTCCAAATGGGCCACCCAATCAACATCACAACCAGAATTATTACAGCAC
TCCTCCGCCTAATCAAGTACCACCACCACCCAACCATGGACAAAACTTCA
ATAACCAGAACACTTTTCAAACACACCTTCCACCAAATCAAGGACCAAAT
TTGAATAATCAAAACGCTCCTACACAAGAGCAAGGTGTAAGGCCCCAGCC
ACACTACCAAAACCAAGGTGCTTTGTATAATAACCGAGGGGAAGTGACAA
ACCCTAAGAAAACTACTTCTTAAGAACTTCCAAAGTCGTTTTAAGATGAA
GTCAGTGAGTCAGTGTACTCCTGAAAGAGATTGACGTGTATTTGGATGGA
TTTAAAAAAGTTCCCTTTTGGAACTCTGTACAATGTTTTGTTTTCATGGA
TGGGGAAGTTTTTGATTGGAGCAATGAGTATCTTTCAACTCTAATTAGTG
AAATGTGCTATAAAATAGACGTGgtaatttgcattttttttgtatCTGGG
ATTTCTCAGAAACGCAAGGTGGTATTtacaagagtttttttttcttaaca
aaTATTAACATTACTCTTTAAATTCAAACCATAACTTTGATTGATCATAA
TTAATTCATTTGTGTCATCTCCATGTGGTTTTTGAGGTTTTTTTGCAACC
ATTTTGTCAAACTGACATTTTGCAGTTTAATTGGTCTGTTTACATTACTT
TCCGC
Run BLAST on NCBI

transcript from alignment at sc0000118:518801..527073-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010929 ID=TCONS_00010929|Name=TCONS_00010929|organism=Clytia hemisphaerica|type=transcript|length=8273bp|location=Sequence derived from alignment at sc0000118:518801..527073- (Clytia hemisphaerica)
CAAGAGCCATTCAGAAATAAAGATAAACAAAAGAAGATTGTTATGGATGA
AGTGGAAAATGCTGAAGTTCTTCTACAAGGTTCAAATAATGTGGAATTTG
ATGTAGAAATAGCATTACGTGAAGAAAATAACAATTATCTTAACAGTGCT
GAAGGAGGTATTGCTGAAGATTTGGCCTTCATTATGCAAAACGCAGCACT
TCATGACGATAAACCAGTTAAAGTTTTGAACATTGCAGATTATAGTAGTA
GCAGTGATTCTGATTCTGACGGTGATACCACAACGTCATCATCGTCTGAT
TTGGAGATTGTTGAGAAACCGAAAAAGCAAAAAGTCACAATTTGCATCAT
CAGTTCTGATGATGAAACCATGGAGACAGAACAACAAACTGAGACCAACA
ACAATAACAAAAAAGAAGAAAATATTGAAGACTGTTGCAAATATTTGATG
AAGGGTTTAGTTGAGAAAGTTGTACGTGAAGAAAGACGAAACAAAGGGAA
AGATTCTGATGACTCTACCGATGATGAAAGCGAACAACAATTCATTACTC
AAGATGACCGGTATTTGCAGTAAATTCCCTTATTCTATCTTCAGACCTTG
ATGTGACAAATATGTTTTGCTATTACAGTTCTTTTTTTTGTACTTTTCTG
TATGCTCATTTTGGAAGATAAATTTAGAGACCGTTAATGGTTTAATAGTA
GTATGCAGGGTTAAAGCAAGGATCTGTCAATATCTCTTCTTTGTTATACT
GTTGGCAGAAGAAGGACCAGGTTACAAACACATTCTTTCTCACAATTTCA
TGAAGTTAAACATTTGTCTTTTCTTGCAGGGTGAATTTGGCTTCGATTGT
TAGCAGCGAAGAACGAGTTGCTAAAGAAATACCAAGAGTTTTACATGAAG
TTCTTCCTGAGGTAAAATATAAATAGACGATATCGGATTTAGATAAATGC
AATGCATTCTGGTTTCTAGGGACTCTCAAAGGAATTATAATAGATCAATT
ATAATAGATTATAATTCCTTTGAGAGTCCCTAGAAACCAGAATGCATTGC
ATTTATCTCAATCCGATATCGTCTATTGGCAGCTGGTTTTAGTCAACAAA
TTTTTGATAAGTCTTGTAAAGTTTGATCAATAGCACCAACTAATTGGCAA
TTTATTGTGTAATAATTAAATAGTAGATATATGAATACTGACTAAAACCT
TATTATGACCCAAAAACATTGAAATCTACACCTAGGCTAATTGAAAGTAC
TTTCACTCTGAATAACAATAAAGCTCTCTTTACACCAGGAACTTGAGGTC
GAAGAAGAAGAAGTGGAACTATCTACTGAAGATACACTTGTCTCTATTGG
CGTTGTCTCTGGTGTTGTCGAAAAAATGAGTACGTGTTCAACCCTCTGTT
TTGAGCTGCTTCACAATATTGTCAATCTGTATGTCAAACATATTTGATAC
ATCTCTTTCTCACAAGAAACCTAGCACACAACCAATTTTTGTATTCTATT
TTCAGTTGTCTTGGAAGCCAAAAAGGATGCACCAGCTCTAGATGCTGACA
CTGCACTTTTTCTCAGCAAAGATAAATATCTTGGAAAAGTAATTTATTAG
TTTTGTAGATTGAATTTTATTAACAATAAACCTTGGTACACTTCGAACGT
TTATCTGATTAGTAATTCTTAAAATCAAACTCCCATAAATTAAATCACAG
CTAAACTAATAATAATGTAATACTCCTAGAATCATCAAAATGATTTTCAA
ATATGCCCCTAGATGCTACCCTCTCAAAAGGTTTGAGATTTTTAACAAAT
CTTCTTCCCAAAGTGATACTTTAGGTTTCTCATTTAGATATTTTTAGAGA
TTTGATCTTATTACTTCTTTGATCTTTTGAAATCAAATATCCTTTCATTT
TTTAGGTTTTCGACACGTTTGGTCCAGTAAAGACACCATTTTACAGTATT
CGAGCACCATCCAAACTTGACTGCACTCAAATTGCCAAGGGAACAAAAGT
TTTCTTTGTCCCATTTAATCAGAATCTGACTCGTTATATTTTTGTCGAAG
AATTGAAAAAGTATGTTTTCTTCTTGAGTAATTCATAAACTTAGGGTTCA
GAGTTTTACTTTCAAGGGAGTGGAGTGTATTGAATAGTAGAGCGTCATTT
AAGACAGTTCCTTGTTGAAATTGACTTACACTATAATCGAAAAATGGAGC
AAATCAATTATCGAATAGTATAATGTTGAATTAGAGAACATCAATTGCAA
ATTGTCAGCAAGAGACCCACATGTACACCAACCAAGGGTGCATACCATTT
AGCCAAAAACCCAAAAAAGTGAAACAGAGGGTTTAGCAAACGCGTTGATT
CATTTAAAAGTTTACCTAAACAGACGGTCAAAGCCAACAGTCTTTTTTCT
GTGTTTTCTTTGTTCGCTAAACCGAGGGTTTACCCAACAAACTGCACCAT
TTGATTTTTTGTTTTGCTAAACCATTTTTCTCACCAAGCACTACACCTTG
TTCACGCTAGTTCACTAAGCGCACGCATGCATAAGGCCTAAGCTTTAATG
TTTTCTTCAGCTAGGCTACCATTTTGAAATTGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCAATAGCTTCTTTGT
CTAGGTAAACAAACCCAAACCATTTGCAGTTTAGTGAAACGGTTTGAGTT
TGTTGGTTTTGAACATTAAAAGGTATGCAACCCAAGAGAACACACTTTTT
CCCATCTCATTTTTATCAAGTGACCATTTTTATTAACCCACCAAAATACA
AGCACATAAAACTACTAGGTCTGCCATGGCAATCAACCCTTACTAAAGTC
ATCTTCAATTGAAATGATAAGGGATCAGTTGATGGACTTTCATTTCCAGG
ATTGCAGATTAATGCTTGGTAGCCCTAGAATTCATACTTTTTGGACCTAC
TCCGGTGGAGTGGAGGTCCTATGAATTAACTTTTGTCCGTTCATCCGTTC
GTTCGTTATTAGCTTTCCTCGTGATTGGCTCATTAGTTTTTTCTGATTTT
TTTGCACAAAGATGTGTAACTATAAACTCTCGAATGTGACGGAGCCCGAT
TTTCGAGAAAAAAAATTTGGGGGCAAATTTGGGCCAAAAAACGGCTAAAA
GCGGGTTTTTTTGGATCATTAAATTTTTCTGATTTCTTGCATGAGAGTAG
GGTACCATCATAGGTAAAAGATGGCTCAAGCAGATTTTTTCAAAAAAATT
TTGTTGGCTCAACGCATGTTTATCTATAAGAATCACTGTTAATAAGCATA
CATCAATGTTCTTAGCCAAATTACTCAATTTTTTGATGAGATAGATGTTT
TTTTTACTCACAAAGTCTTGAATATGAAAGAATATTTCAAGAGCATGAAA
TTTTGGTTTCTAAACGTGTTTTTATAAGAAACAAACAACTAATTTAATAG
ATTGTCACTATTTGTGTTCTGAACGATTGTTTAATGGTCACGCTCACGTG
GATATCAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAG
TATCATTTGTTAAATTTTTATAGATTGAAAGGATCTGATGCATCTTGGAA
GAATGACTGCGAGCCACCTCCAGAGGTTTGTCTTTGAGTGTTAATGCTCC
TGTTATCATGTTTGTTAAAAAGTTGCCAATCTTACCACCAACAAACACTT
CAAAGCTAATCTTTACAAATATGAAGCTGCTGGCTAATCTTGCAAAAGCA
ATGCAAATAATTTCAATTTTCAACGGATGCGTCTCGAAGAGTACTATCGA
ATACAGGTATAGTTTGTTGAGGTACCATTGCTAGATCTTGAGATATTTGC
ATTTCAAATTTTGCTGATTCAGCATATTTGAGCGATTTTGATGGTTTTTT
GCTGAGTCACCAAAATTTGAAATGCAAATATCTCAAGATCTAGCCATGGT
ACCTAAACAAACTATACCTGCATTCGATAGTACTCTTCGAGACGCATCCG
TTGAAAGTGGTTTTGAGTGCTGAAATTAATTTTTAAAGTGACGTCAGCAT
TAAATATGACGATTTTTCAGCCATTATGGCTATTTTCTCAGGGTCTGGTT
GACCAAAATTTACAAATGACCCCATTTTGGATGTCTACTCTTCAAGCTCT
ATCAGATGGAACCATCAAAATTAGCTGTTTAAAAACCTTTAAAATTGACA
TTTTTAATGGGTCACTGCTTTTTGCTTAGAAAATCGCCTTTCACTCTTTG
GTCCATAACTTTTTTTCCCCATTTTCCCCCCTCGTTCGCTCGTATTGGAC
CTAGCTTTGCTCGTTCCAATACGTCGCGAACTCGGTCGATATTTTGCCAA
AGAGACCGGCTTTTCGGTTAATAATCCATAAGCATTAATCTAACCTCACT
TTGCCAGGAAAAAGTATCCATGAGCTTAATAATCAAGCATAAAAAGTACA
GTTCTTTTGGTCACTGAAAAGAACTACTTTATTGGAACTAATTTTTGCCG
AAATTGATTTTAGCCTTTTAGCACAAATTTGAACCCACAAAATACAATTT
TTTTCAATTTTATTAAAAATTTGAAAAATCCCTACGAAAATGAAAGAAAT
TTGTCCAAAAAAGGTCAAAACCGCGAAATGCAATTTTTCTGATTTTTTTT
TCGACCGAGAAAATTCCTAGAAATCCATTTATTTTGTTGAAGTTTCATTT
AATCCTCTCCTTTCTCCCAAGTTGTTGGATTATTCAGATGATGAACAAGA
GAGAGAAGCCAAGAAGAAAGGAAAGAACAGAAAAAGACAAATGTAACAAA
TCTTTTTTTGTCTTCTACTTAGCAAAATTTATGTTCACGGTCCAAATCCC
CGCTCCTTAGAATGTTGCTTTCAGTTCATGGATAGTCAATCCGGCTGGCC
GTGAAAGTAATCAAAAGACTGTCTTAAAGTCCTAGATTACTTGGCTATCC
ACGTAGAATATCTCCCATTAACATGTACTGTTATACGACATATTCATGTC
CAAAGTTCAATGATCTTGTTTACTTTCACTTTCACCTTCATTTTGTTGTT
GTTTTCATCCAGGTATGAACAGAACGAAGAAAACCAACAGAACAGCAAAA
GTAAGAATGGGCTATTCCAGAAAATTTTTGTACATGTGGGGTAGAGGTTA
TATTGGATTTTTGTCCGGGGATGGTGAAAAATCTGCAACATTTGCCTTGT
TTTAGGGGCAAACTTGCTCTGATTAGGGGTAATTTTGAATTTCAAATAAA
TTTCCAAAAATGTTATTCCTCCACCCTCCATATTCAATTTTTTTCTGGAA
GGGCCCAAAGCAAATCAACACCAAATCCTTTGTCATATTCCTCTCATGTT
TCTTTATTGGAGAGGACTTTCCTTATTATATCCAAACCAAACCTAGTAAT
TCTAATTAGAAGTGAATGAATCCATACACATCCTGGATATCGTTTTTCTT
TTCAAAAAGTACTCTGAGGCGCTCCTTAGATTACAAAGGTTTCAGGCTCA
TTACTGGGCGGTACTCTCAAAATTTAAAGTATTAATTCAAAAGACATCTG
AAAGGAAAGAGCACTACCCTAGTTTTTTTTTTGCAGTTTTTTAATATTTA
CTAATTAGAGCATCTATTTTTATGGCTTTATTTTTCATAATAGATGTTCC
CAGGGAAAGAATGGCATCTTGAGCGTCAAATTATGGCTGTACTAGTAAAC
TAAGCTATATGGGGATTGGAGTGGAGCTCTTTAGAGGGCGCTAAAATTAG
GATACTCAAGAGATACGTTTTGAAGTACTTGAAATAATAAAATAAAAAAA
GTTGTAAGCCACATAAGCGTGTCTTTGCCCATCCATTGAGAAGTACAAAG
AAGTTTAATAAATGTTTTAAGATTTCGAATTGAAATTTTGAGACACATTT
TTTACTTTGACATGATAACTTTAATTTCTTTTTCTAGAACAACCTTCAGC
ATCAACTAATCGCAGACAACGAAAAATGAAAGCTATCGATCTCACAAAAC
ATGGGAACCCATTACTGGATCATGCACGTCTAATGAATGATCCAAGAGCC
AACAAAGCGGCCGCACTGACGCCAAGAGAACCACCACGACAACAGGAAGT
TCCTCTTTGCGACGTCATGCCCATCGAAGTTAATGATTATGACAACTCAA
AGATTATGCAAGAATCACGCTTAGATTACGTGTCTCCCTTACACAAAACT
AATCCTAAACCAAAATGGTCTAGCAATGACAACAACAGTTCAAGAGGTAG
AGGTCGTGGACGAGGCACTGGACCATCGACGCAAAGACAAGGGTCATCGT
GGAACAGACAAAACTCTCACGAACAACAGCAGCAACCGAATTTCAACCCC
AATCACCAACAAAACACTAATTCACAACCACCTCCTCCTCCAAATGGTCC
TCACCAGTTCCATCATCAACCAAATTATTCTCAACCTCCTGGGAACCAAT
ATCAATATCAGCCACCATATAATAATTCACAACCTCCTCCGCCACCACAG
AATTACCAATGGTCTCAACAAAATTCCCAACAACCTCCTCATCAAATCCA
ACACCAAAATCATTATTCTCAACCGCATCCGAACTACCATCAAAATAACT
ATCCACCACCACCAAATAACTGCCAGCCCCCAAACAACTATGGATCTGCG
CAGAGTGGTACACAACCACCCCAGAGCAACTTTCAGCCACCACCAAACAT
TCCCCAACCTCAAGATAAACCACAAGCACAAGCTCCTAAAGAAAATTCTC
AGCCACCAAATGAATCTCAGAAATCGAAAAAAGAAGTTCGTCATCAGTAC
AATCCGTCTCAAAATCATCCTTTGTTGCGTCATCAATCAACTGGTGAAAA
AGGACCAATGAATGACGAGGGACCTCAAAGTCATGGGCCCACTTCGCATC
CAAAAAACCAAGGTCCTAATCTAAATCAAAGTCAAGGTCCTAACCAACCT
CAACAAAACCAGTTTCCGAACCCGCCCCCACAAAATCATGGTCCGAACCC
ACCCCCACAAAACCAAGGGCCCAATCCACCTTTGAAAAATCATGGCCCTA
ACCCCCATCAAGGTCATGGTCCTAACCCACCACCACCAAACAACTATCAA
GGGCCGCCTCAACACCAACCTTACCACCCTCAGCCACAAAACAACTTTGG
ACCACCGCCGCCGCCTCACCAAAACAATGGCTGGAATCCAAATCAAAACA
ACCCTCCTTACATGAACCAACACCCGCCCAATTATAACGCCCGACCTCCT
CAGCCACCCAATCAACAGAATGGAGGACCAGGCTATCATTACAACTACAA
TCAACAAACCTATCCGAACCAGGGGCAGCCATCAAACTGGAACCATCAAC
AACCGCCTCCAAATGGGCCACCCAATCAACATCACAACCAGAATTATTAC
AGCACTCCTCCGCCTAATCAAGTACCACCACCACCCAACCATGGACAAAA
CTTCAATAACCAGAACACTTTTCAAACACACCTTCCACCAAATCAAGGAC
CAAATTTGAATAATCAAAACGCTCCTACACAAGAGCAAGGTGTAAGGCCC
CAGCCACACTACCAAAACCAAGGTGCTTTGTATAATAACCGAGGNGAGCA
AGGTGTAAGGGCCCAGCCACACTACCAAAACCAAAGTGCTTTGTATAATA
ACCGAGGGGAAGTGACAAACCCTAAGAAAACTACTTCTTAAGAACTTCCA
AAGTCGTTTTAAGATGAAGTCAGTGAGTCAGTGTACTCCTGAAAGAGATT
GACGTGTATTTGGATGGATTTAAAAAAGTTCCCTTTTGGAACTCTGTACA
ATGTTTTGTTTTCATGGATGGGGAAGTTTTTGATTGGAGCAATGAGTATC
TTTCAACTCTAATTAGTGAAATGTGCTATAAAATAGACGTGGTAATTTGC
ATTTTTTTTGTATCTGGGATTTCTCAGAAACGCAAGGTGGTATTTACAAG
AGTTTTTTTTTCTTAACAAATATTAACATTACTCTTTAAATTCAAACCAT
AACTTTGATTGATCATAATTAATTCATTTGTGTCATCTCCATGTGGTTTT
TGAGGTTTTTTTGCAACCATTTTGTCAAACTGACATTTTGCAGTTTAATT
GGTCTGTTTACATTACTTTCCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006136XLOC_006136Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010929-exon-sc0000118-1575043694:526514..527073TCONS_00010929-exon-sc0000118-1575043694:526514..527073Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:526163..526244TCONS_00010929-exon-sc0000118-1575043694:526163..526244Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:525695..525785TCONS_00010929-exon-sc0000118-1575043694:525695..525785Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:525486..525568TCONS_00010929-exon-sc0000118-1575043694:525486..525568Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:525014..525168TCONS_00010929-exon-sc0000118-1575043694:525014..525168Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:523299..523350TCONS_00010929-exon-sc0000118-1575043694:523299..523350Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:522132..522202TCONS_00010929-exon-sc0000118-1575043694:522132..522202Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:521824..521861TCONS_00010929-exon-sc0000118-1575043694:521824..521861Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:519331..520986TCONS_00010929-exon-sc0000118-1575043694:519331..520986Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1575043694:518801..519267TCONS_00010929-exon-sc0000118-1575043694:518801..519267Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:526514..527073TCONS_00010929-exon-sc0000118-1510915933:526514..527073Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:526163..526244TCONS_00010929-exon-sc0000118-1510915933:526163..526244Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:525695..525785TCONS_00010929-exon-sc0000118-1510915933:525695..525785Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:525486..525568TCONS_00010929-exon-sc0000118-1510915933:525486..525568Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:525014..525168TCONS_00010929-exon-sc0000118-1510915933:525014..525168Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:523299..523350TCONS_00010929-exon-sc0000118-1510915933:523299..523350Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:522132..522202TCONS_00010929-exon-sc0000118-1510915933:522132..522202Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:521824..521861TCONS_00010929-exon-sc0000118-1510915933:521824..521861Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:519331..520986TCONS_00010929-exon-sc0000118-1510915933:519331..520986Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1510915933:518801..519267TCONS_00010929-exon-sc0000118-1510915933:518801..519267Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:526514..527073TCONS_00010929-exon-sc0000118-1491911889:526514..527073Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:526163..526244TCONS_00010929-exon-sc0000118-1491911889:526163..526244Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:525695..525785TCONS_00010929-exon-sc0000118-1491911889:525695..525785Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:525486..525568TCONS_00010929-exon-sc0000118-1491911889:525486..525568Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:525014..525168TCONS_00010929-exon-sc0000118-1491911889:525014..525168Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:523299..523350TCONS_00010929-exon-sc0000118-1491911889:523299..523350Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:522132..522202TCONS_00010929-exon-sc0000118-1491911889:522132..522202Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:521824..521861TCONS_00010929-exon-sc0000118-1491911889:521824..521861Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:519331..520986TCONS_00010929-exon-sc0000118-1491911889:519331..520986Clytia hemisphaericaexon
TCONS_00010929-exon-sc0000118-1491911889:518801..519267TCONS_00010929-exon-sc0000118-1491911889:518801..519267Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118supercontigsc0000118:518801..527073 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.6174	22.3291	22.2898	22.1452	23.9195	17.6424	15.2698	18.8382	12.0714	14.6229	10.2327	7.0924	10.2399	11.9513	7.42753	10.8494	9.53197	8.18318	2.78558	4.34008	9.04195	10.0303	14.2949	12.4248	15.8437	17.824	5.61855	3.5206	17.7613	20.4051
Blast
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BLAST of TCONS_00010929 vs. Swiss-Prot (Human)
Match: NAF1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens GN=NAF1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.442e-29
Identity = 58/133 (43.61%), Postives = 93/133 (69.92%), Query Frame = 1 
Query:  691 LVSIGVVSGVVEKMIVLEAKKDAPALDADTALFLSKDKYLGKVFDTFGPVKTPFYSIRAPSK--LDCTQIAKGTKVFFVPFNQNLTRYIFVEELKKLKGSDASWKNDCEPPPELLDYSDDEQEREAKKKGKNR 1083
            L  +G+VS ++E+++++E+  + P ++ +T +F S  +  GK+F+ FGPV  PFY +R  S   ++   I     ++F P  ++ T+YIF E+LK+ KGSDASWKND EPPPE LD+SDDE+E+EAK++ K++
Sbjct:  198 LKPLGMVSSIIEQLVIIESMTNLPPVNEETVIFKSDRQAAGKIFEIFGPVAHPFYVLRFNSSDHIESKGIKIKETMYFAPSMKDFTQYIFTEKLKQDKGSDASWKNDQEPPPEALDFSDDEKEKEAKQRKKSQ 330
The following BLAST results are available for this feature:
BLAST of TCONS_00010929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAF11.442e-2943.61H/ACA ribonucleoprotein complex non-core subunit N... [more]
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