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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010943 ID=TCONS_00010943|Name=TCONS_00010943|organism=Clytia hemisphaerica|type=transcript|length=1234bp
atatttttacatgtaaaatacaagatatattgtactctttttaaccaatc
agattgcagatattttttggatcgccgataacaGATAATAACAGACCACC
CATTCTGCCCATACCAGCACCAAGCCAAGTTCGCAGAGTGCAGCACGTTT
GCTTGAGATCTTGAGTGCACAACTCGGAAAAAGTCGAGTGCAGGTGCAAA
ATCTGAGGTTTTCCAGATGCAAGTGCAGACAGTTTTTTAACTCCAAGTGC
AGAGTTTCGCTATTTTCTCCTCAAGTCTAAAGGGATGTGAATAAGATCAT
TCCTTAGGAATCGCAACAAGTTGCGGTCAATGGTAAAACATCAAAGTTTG
CTGAAGTCAAAACAGGAGTCCCACAAGGAACAGTCTATAATAATGGGTCC
TAGGACCTTTtagtatgaaatatatagatagatagaacaACCCTGCTGAC
GCACCGTACAGTCCGGTGCCAAAAAGTATCCCTCAGCCACACCTGAAACC
TTTTGTCCggtgttaatttttcgaacttCTGGACACCATCGGGCACGTGT
GTCTCAAAAATAATGCGCACCGGATGGACGACAGTCTGATGTTGAGATTT
TCGGTGTTAAAAAGTATTCTCATCCGACATCGGAACTTTGCTGGTCCCGT
GTTtgtcaggctagctctaaagctctgaAACAGCatttaataacatgaaa
accagaatatgattcttcaatgggaatcataGTAAAGTCCGGTGTGTCAG
CACGGTCGTTAGATAGATAGATGTAGCGAATATGAAGATATGACCTAgtt
gttcagccaaaacaaTCACAGTAGTACTGGACAATCACTTGTCTGGCCTA
ATTTAATGATACTTTTCCAGCAACGCTAGATAAAAAATCGATGGACAGTC
TGGTCAGCGGTCAGTTCGTATGTATAATAAGGAGAGAACCCCCTGGCAAA
CTTGGGCAAACCCTTCAATGAACCCCTTGGAAAGTctgaaaattgaacta
aaatcCCCTTGAGAAATCAAGGATTTACCCCTGTCCTTCTGAGCTTTGCT
TAGCTAGATAAACTCCTGTTTTCTATATGTGCATCATAGTCATAAGATAG
AACGGAATAAATTAAATGATTctttaggcggcaatcacaaatatcttcgt
ttcgcgtcgcccgaccgactctcgaaaattgattAGAATTGaatcggtaa
atttgtcggactttttctgtcaatgacctttcct Run BLAST on NCBI transcript from alignment at sc0000118:337066..338299 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010943 ID=TCONS_00010943|Name=TCONS_00010943|organism=Clytia hemisphaerica|type=transcript|length=1234bp|location=Sequence derived from alignment at sc0000118:337066..338299 (Clytia hemisphaerica)
aggaaaggtcattgacagaaaaagtccgacaaatttaccgattCAATTCT
aatcaattttcgagagtcggtcgggcgacgcgaaacgaagatatttgtga
ttgccgcctaaagAATCATTTAATTTATTCCGTTCTATCTTATGACTATG
ATGCACATATAGAAAACAGGAGTTTATCTAGCTAAGCAAAGCTCAGAAGG
ACAGGGGTAAATCCTTGATTTCTCAAGGGgattttagttcaattttcagA
CTTTCCAAGGGGTTCATTGAAGGGTTTGCCCAAGTTTGCCAGGGGGTTCT
CTCCTTATTATACATACGAACTGACCGCTGACCAGACTGTCCATCGATTT
TTTATCTAGCGTTGCTGGAAAAGTATCATTAAATTAGGCCAGACAAGTGA
TTGTCCAGTACTACTGTGAttgttttggctgaacaacTAGGTCATATCTT
CATATTCGCTACATCTATCTATCTAACGACCGTGCTGACACACCGGACTT
TACtatgattcccattgaagaatcatattctggttttcatgttattaaat
GCTGTTtcagagctttagagctagcctgacaAACACGGGACCAGCAAAGT
TCCGATGTCGGATGAGAATACTTTTTAACACCGAAAATCTCAACATCAGA
CTGTCGTCCATCCGGTGCGCATTATTTTTGAGACACACGTGCCCGATGGT
GTCCAGaagttcgaaaaattaacaccGGACAAAAGGTTTCAGGTGTGGCT
GAGGGATACTTTTTGGCACCGGACTGTACGGTGCGTCAGCAGGGTtgttc
tatctatctatatatttcatactaAAAGGTCCTAGGACCCATTATTATAG
ACTGTTCCTTGTGGGACTCCTGTTTTGACTTCAGCAAACTTTGATGTTTT
ACCATTGACCGCAACTTGTTGCGATTCCTAAGGAATGATCTTATTCACAT
CCCTTTAGACTTGAGGAGAAAATAGCGAAACTCTGCACTTGGAGTTAAAA
AACTGTCTGCACTTGCATCTGGAAAACCTCAGATTTTGCACCTGCACTCG
ACTTTTTCCGAGTTGTGCACTCAAGATCTCAAGCAAACGTGCTGCACTCT
GCGAACTTGGCTTGGTGCTGGTATGGGCAGAATGGGTGGTCTGTTATTAT
Ctgttatcggcgatccaaaaaatatctgcaatctgattggttaaaaagag
tacaatatatcttgtattttacatgtaaaaatat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010943-exon-sc0000118-1491911889:337066..338299 | TCONS_00010943-exon-sc0000118-1491911889:337066..338299 | Clytia hemisphaerica | exon |
| TCONS_00010943-exon-sc0000118-1510915933:337066..338299 | TCONS_00010943-exon-sc0000118-1510915933:337066..338299 | Clytia hemisphaerica | exon |
| TCONS_00010943-exon-sc0000118-1575043694:337066..338299 | TCONS_00010943-exon-sc0000118-1575043694:337066..338299 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000118 | supercontig | sc0000118:337066..338299 . |
Blast
The following BLAST results are available for this feature:
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