TCONS_00010397 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010397
Unique NameTCONS_00010397
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2865

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010397 ID=TCONS_00010397|Name=TCONS_00010397|organism=Clytia hemisphaerica|type=transcript|length=2865bp
TTATTCTTTTAGAGTGTGGTAATCAATCATATTGAtaataaaagttattc
ataaaaatgTCCCGTGGTGGGAAGCAGGGCTACGAAAACTCCACACAAAT
GTCTAAAATGCTCCCTGCTTCAAACATTTACAGAGTTGGAGACTATGTTT
ATGTTGAAACTCAACCTAGCCATCCTTACCAAATCAGAAGAATTGAAGAG
CTAACAAAGACATCCAATGGTCAAGTAGAGGCAAAAGTGTCCTGCTTTTA
CAGAAGGCGAGACTTGTCAAATGTTTTGGGAAGGGAAGCAGACAAGCATG
TTCAATCTGCTGAAATTGAGGGAGAGATCAATGTTGGATCAGACATCCTA
AGTGACGAGCAAAACCATCAATTGAAACTCAGAGAAGTTTTTCTGTCTAG
ACAACTTGAAATAATAAATGCTAATACAATAAGAGGGAAATGTTCAGTCA
CACTGTATTCTGAAGTTGAAGCTTTGTTGGATTACTTGAAAGAGGAAGAT
TGGTTTTACTATTTGTTGGTATATGACCCACAACAAAAAACATTGCTTGC
TGATCGTGGTGAGATTGGAGTTGGTGACGAATATCAAACAGAAGTGGAAG
ATGAAATGGCAAAAGGAGAATTACAAAATAACGATGAACTTGAAACTCTA
GTTTGGGATCCGGAAAACCCACTTTCTGACAAACAAGTCGACcagtttct
tgtcatttcaAGATCAATTGGTACATTTGCACGGGCTTTAGACACAAGCA
GCTCCTCAAAAGAATCAAGTTTACATTTGAGTGCAGCTGCTGCTTCCAGG
GACATCACTTTGTTTCAAGCATTGACGCTACTTCACAAGAGTAATTATGA
CGTCGGAAAGGCCTCATTGTCATTGGTTCCTGATGGTGGCCCCATCCTCT
GCAGGGATGAAATGGAGGAGTGGACCTCAGGTGAAGCAACTCTATTTGAG
GAAGGAATTCGAAAACATGGAAAAGAGTTCAACGAAATTCAGCAAGAATA
TCTACCTTGGAAATCAATTTCTTCTATCATCGAATACTACTACATGTGGA
AAACCACTGATAAATATGTCCAACAGAAACGTATGAAAGCTCAAGAAGGA
GACAGCAAAGTCACCCAAATTTTTATACCAAGCAGTAACACAGCTATCAA
CTTGACGTTAGCTATCCAAGCCAGCTCTCAATACCAGGTGACGCCTAGTG
GATCCTTGGTGACACCAAATTACATGTGTGAAAGCTGTTTCTGTAAAGAA
TCAGTCTTGTGGTATCCATGGGGACCAGCTACATCCAGCTGCAAATTGTA
TTTATGTAAAGATTGCTGGGTCTACTGGAAAAAGTGTGGAGGCTTAAAGA
AATCAACTAAATCAAATGAATCTGGAAACGATGCAAAGGAAGCCTGCTAC
AAATGTAGAATTTGTAACAAGAAGTTCAATCGTGCCGAACGCCTTTCCAG
TCATATGGCCACACATAGAGGTTATGATTGTACTGAACCTGGCTGTGGAA
AGACATTCAACTTAAAAGCTCACTTGACTCGCCATCTGGCAAAGGCTCAT
GGCATTTATACATTGGATAGCAAGTTGAAGGTGAAGACACCCTTCGTTAT
GTCACCAACACCTTATATGAGAGCAACACGACGTCTTTGCAAAGCCACTC
TTCGTTTGAGACACTTCTCCAGATCTCCAACGGACACCATAGACAACATT
GAAGTCAAGAACGAAGctttgaaAGTAGTTACAGTGGAAAAAGCAAAGTC
ATTGATTGACAAACCATTGAAGAAGCGAGTAGTTGCTTTGGATTCAGTgt
taagtgttttaaagaagCTGTCTGCAAGTAACAAAGCCAACTCACAAAAT
GCTTCACAAGACAATTCACCTGGAAGTCGAAGTGCCGCTTTCTCCCACAC
TTCTACTTCAATCACACAGAACTTGAAAGCGAAGAGTTTGAAAAGCCCGA
CTCCAATCATGCCAGGTGGTCACAAACGACCTGCTGATCAAGATAGCAAT
GACACGCCTTCAGCCAAAAGGCAACAACAAATGCAAGCTTCATCGCCTCT
TGGAAGAAAAGGGTATGGTTGTGCAGAGTGTGGCAAAGTATTGCATAGCC
AAGTGAGCCTTCAGCACCATATGCAAATGCACCACACAGACCGTGAGCAA
GTGGCGCCACAGATCCATGTTCCACAGAAAGACGGCCACAAACGCCACTA
CCAACAACACTACCACGACATGCCACCGCAACACCAGTCTTACTCCTCAC
ACCACCCAATGAACCAACATTACCCCGATGTCAACGGTGGCAGCCGATCT
GTGGCTAAATCTTCAAGAACACCAACAGGATCCACTTCAAGGAAGCAGTC
ATACAAAGGAATCGTTCAACAGAACCGTAGAGATCCTGACCTTCAATATG
TGGATCCTCCCCAAGAATTCTTGTTCAATGCCACTAAAGAGTCCAGAAAA
TCAAGACGATCGTTGCCATCACGAGTGCAAAGGAAAATTGCTCGAAAACC
GTTCGTACAAATTAAATGCTCACAAGAGTTACGTGATTCCATTACATGCA
AGAAAAATGACATGAAAACGAAAACAGCCGACCCTATCGTTATTGATGAC
GattgaatgcaaaaaaaaagttccaataaCTTTGGATGAACCGtagtcaa
aatatttattacCATTTTGTTTGCTTACGTCGTTGAATATGACTCTGAAT
ACTGGAAGATTCTATTTGGAATTTTATTCAAACAAATCGAACACTGATGG
CTGAATTGATAGAGGTACAGGCAACCTGTAAACCTTAGACATTTAAatct
ttagaattttttttgtacaattaaatttgattgaaataaaatatccAATT
CTTAGCTTAAAATTA
Run BLAST on NCBI

transcript from alignment at sc0000106:101403..108866+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010397 ID=TCONS_00010397|Name=TCONS_00010397|organism=Clytia hemisphaerica|type=transcript|length=7464bp|location=Sequence derived from alignment at sc0000106:101403..108866+ (Clytia hemisphaerica)
TTATTCTTTTAGAGTGTGGTAATCAATCATATTGAtaataaaagttattc
ataaaaatgTCCCGTGGTGGGAAGCAGGGCTACGAAAACTCCACACAAAT
GTCTAAAATGCTCCCTGCTTCAAACATTTACAGAGTTGGAGGTAATTTCT
TATTGTGTGTTTATAAGACTAAACAGTGTAATCAGGTGTAATGTAATTTA
CTGGAGATAACTTTGCTTAAATCATCaacattgatttttttgttcaaaCC
AAGACCAGAAAGAATATTACCATTATACACCTTAAtaagcttggtactca
cttTTGTTAAAATTGCATTTATTTGTACCTGAGCACagcaaacaaacttt
ttctacTAATATCATTCACTAAATGTACTTTGACCAGCTTTGACACACTT
AAACACACTTAAAAAAACACCTTAAATTTGCTAGGCAGACCTTAAACAga
cattatcaaaatatttggaattttcaatttttttcaaaatcatcaaagaC
ACTGCATAAAAACACATTCAATTATTTTGGAATAGAAAAAAGAGAGGgga
tttttttgcatttaaCTGCGTCTTACCCccttttcatttgaaaaaaattg
tagtgAGTACATAATATGGTGTTTAAGTGTGCCTCTCTGATAAATGCACT
TAGGTGCACTTGGATGCAATCTTTTTACACTTAAGTGAGTAATATACTAG
GctcaaaagaattttctttcattgatAGTTTAAAATCGCTTTCTCTATGA
ATTCCAGACTATGTTTATGTTGAAACTCAACCTAGCCATCCTTACCAAAT
CAGAAGAATTGAAGAGCTAACAAAGGTGAAATATATATTGAAATTTATTT
GTGGGACCTAAGACAGGGTAGACCAGAAACATTATTTCCTTCCCTGGATA
AGTACCATTTTTCTCTTTGGTAAAACCAACCTGAAGTTGAATCTGGAACC
TTGTTCATCGCCAACTACACTGTACCTAGACtttaattttccaaagtgtt
tttaaaatcattttaaagcCATTGTTTCACCTATTGATTTGTTGGCTTAT
CATAATatattgatctttgtttttttgacaGACATCCAATGGTCAAGTAG
AGGCAAAAGTGTCCTGCTTTTACAGAAGGCGAGACTTGTCAAATGTTTTG
GGAAGGGAAGCAGACAAGCATGTTCGTAAGTATATTGTGTTTCAAGATTT
TCTTAAAGCTTCATTATAACTGGCATTCATTACATTGGGTTGTGTTGTAA
GAATCCATTCAAGACAAACATTATTTGTCCAATCTTTCCATTTTTAAATA
CAAATACGCATATCTTTATAAACAATTGGATTAGCTTTTGTCAATGTCAG
ATTGGACGTGCTGATATCAGGgatacttttaaaaaaaaaagtttttggga
aAATGAATGCATTTATTTATTTGAAGGCCAAGTATAAAGTATGTCTTTCG
ACTAAAAGAGAGCCTGTCACCAGACAAGTTCAGTGATCTTATCAAGANGC
TAACAAAGGTGAAATATATATTGAAATTTATTTGTGGGACCTAAGACAGG
GTAGACCAGAAACATTACTTCCTTCCCTGGATAAGTACCATTTTTCCCTT
TGGTAAAAACCAACCTGAAGTTGAATCTGGAACCTTGTTCATTGCCAACT
ACACTGTACCTAGActtaaattttccaaagtgtttttaaaatcattttaa
agcCATTGTTTCACCTATTGATTTGTTGGCTTATCATAATatattgatct
ttgttttttttttgacagaCATCCAATGGTCAAGTAGAGGCAAAAGTGTC
CTGCTTTTACAGAAGGCGAGACTTGTCAAATGTTTTGGGAAGGGAAGCAG
ACAAGCATGTTCGTAAGTATATTGTGTTTAAAGATTTTCTCAAAGCTTCA
TTATAACTGGCATTCATTACATTGGTTTGTGTTATAAGAATCCATTCAAG
ACAAGCATTATTTGAAGTCCAATCTTTCCATTTTTAAATACAAAATACGC
ATATCTTTATAAACAATTGGATTAGCTTTTGTCAATGTCAAATCTCAAAA
AGAACTTAAGATTGGACGTGCTGATATCAGggatactttaaaaaaaaagt
ttttgggaaAATGAATGCATTTATTTATTTGAAGGCCAAGTATAAACTAT
GTCTTTCGACTAAAAGAGAGCCTGTCACCAGACAAGTTCAGCGATCTTAT
CAAGTTCTCCCAAAAACATATCCCTTAGGAATTTTGTTGACTTTAGCCTA
TTTATGCTTGATATGTCCTTCCTTCCACCTAAAGGAAGTAGACAAAGGAA
TCTTATCCATCAAAACGCATTTAGCTGTACCATTGACATATATTTAATTC
TCAGAATCTGCTGAAATTGAGGGAGAGATCAATGTTGGATCAGACATCCT
AAGTGACGAGCAAAACCATCAATTGAAACTCAGAGAAGTTTTTCTGTCTA
GACAACTTGAAATAATAAATGCTAATACAATAAGGTGAGTCTATAGTAAA
CAATCAAGAGCATAAGATCATTGTTTCCAAACCTATCGGACTTAGTTGTG
TGTGATGATACCCTCTTATCTATTTAATAAAATATGctgtttttgtgaaa
tttagATGTTactatttctcaaaatatgaattaTGTAATTCTTTTAGAGG
GAAATGTTCAGTCACACTGTATTCTGAAGTTGAAGCTTTGTTGGATTACT
TGAAAGAGGAAGATTGGTTTTACTATTTGTTGGTATATGACCCACAACAA
AAAACATTGCTTGCTGATCGTGGTGAGATTGGAGTTGGTGACGAATATCA
AACAGAAGTGGAAGATGAAATGGCAAAAGGTTTGATCTTTGACTTCTGCT
ACTCATTTTTGTTAAGTTAATTGTATGACACCTGAATGATACCaatcttt
tgtattttcttctCTAGGAGAATTACAAAATAACGATGAACTTGAAACTC
TAGTTTGGGATCCGGAAAACCCACTTTCTGACAAACAAGTCGACcagttt
cttgtcatttcaAGGTATGCTTGGTAACATCTACTGTGCACAAGGATCTT
TAACACTCCCTTCTTGAATCTACCTCCTTTTCACAACTTGCCTCTCTCAG
ATGACCTTGGATGGCCACTAATGCCGTCTTTTTGGAGCTGAAAGAGTTTT
CAAGAACAAGTCTATTGCTGACTATTGAATAAATTTTGCTACAAGTCCTC
ACAAATCTTACTTTGAAAATCCTTATCCCCTTTGTAATCATATTTACagc
ttcttttttgattttttgggaaGCTCTAACAAGgctctaaaaaaataaaa
accgcCTGTTCGTATTGCATTGTGATATTCTTTTGGCCTGAACAGGGTTT
TGTGAGCAAATGCAGTAAGGATGTAAAATGAAGCGTGAAGAGTTTTTTTG
AGCTATAATTTGATgataattcaatttcaatttatttattcaGATCAATT
GGTACATTTGCACGGGCTTTAGACACAAGCAGCTCCTCAAAAGAATCAAG
TTTACATTTGAGTGCAGCTGCTGCTTCCAGGGACATCACTTTGGTAAGCC
AATCTATTAACTAATTCAATTGGTATTTCCATACTTCTTCTCTAAGAAAC
TTTTCGATAAAGCGCTCATTTATATTAAATAGTactaaaaaacttttaaa
aacattttaaaacatttaagtTGGAGAATTCATAAGATTTTGGGAGATGT
TTTATTTATTCGTACTGTTTTGTTTAGTTTCAAGCATTGACGCTACTTCA
CAAGAGTAATTATGACGTCGGAAAGGCCTCATTGTCATTGGTTCCTGATG
GTGGCCCCATCCTCTGCAGGGATGAAATGGAGGAGTGGACCTCAGGTCAG
TTCATTAATGTCTCCTCAATCTACTTACTACCATATTTATATTCCGATAA
ATCGCTTGACTCTTTAAGGAATCTCAAATTGGCTCTTTAACTATGGAAGA
CCTTTTTAGATCTTTTGAATGTTGTAATGATGGTTATAACTGGGGATGAT
TTCGCTTTTACCAGTCCTTGCCTTAGGGAAATAATTTGAACAGCAAAATC
CTGAAGATGCTCAAATTTGGATTTCTTCATCATCCTTTATATGATGTATA
TAGGTGAAGCAACTCTATTTGAGGAAGGAATTCGAAAACATGGAAAAGAG
TTCAACGAAATTCAGCAAGAATATGTAAGTCTGTGTTTGAGGCCAAAAAC
TAACGAATTCGGTCAATTTAAGAATCCGTTCTTCTAGTTCTACTACTCGA
TAATAACTCATTATCTTAGCCTATGTAAAGGGTTGAGTCCTTTGGAATTT
TTAATGTACAAACTCGAAAATCAACTATACCTACACAAATGGATAATAGA
TGAAAAGCATATAAAGCATTGTAGACTCGAAACTGATGATAATGAATGAT
CTTTTTCCGATTTTAGCTACCTTGGAAATCAATTTCTTCTATCATCGAAT
ACTACTACATGTGGAAAACCACTGATAAATATGTCCAACAGAAACGTATG
AAAGCTCAAGAAGGAGACAGCAAAGTCACCCAAATTTTTATACCAAGCAG
TAACACAGCTATCAACTTGACGTTAGCTATCCAAGCCAGCTCTCAATACC
AGGTGACGCCTAGTGGATCCTTGGTGACACCAAATTACATGTGTGAAAGC
TGTTTCTGTAAGTATCGATGCATAGATTATCTCTTTTTGCTTATTTATTT
CAGTCTATAAAGCTCTTCAGTATCAGCCAGGTCAACGAAACAAAGTTTAT
TATCTCCTTAACTTGGACTATTCACGCACACAGACGCACTCATGATTCTA
AATCAAAGAatcgtttttttctttcaagGTAAAGAATCAGTCTTGTGGTA
TCCATGGGGACCAGCTACATCCAGCTGCAAATTGTATTTATGTAAAGATT
GCTGGGTCTACTGGAAAAAGTGTGGAGGCTTAAAGAAATCAACTAAATCA
AGTAAGCTATtagattttcactaaaaaacgCCAAACTTCAAACTATATTG
TAACATCACTAGCCAAAAGAATCAAAAGACTaacatatattttataaaag
tGTTATTTTTATGACGGTAATTCATTCATCCTTCTTAGATGAATCTGGAA
ACGATGCAAAGGAAGCCTGCTACAAATGTAGAATTTGTAACAAGAAGTTC
AATCGTGCCGAACGCCTTTCCAGTCATATGGCCACACATAGAGGTTATGA
TTGTACTGAACCTGGCTGTGGAAAGGTAACTTTGAATTATATTTATACAT
CATCATCCCTTTTGTGGATTCACACCATTCAGTCTTTTTTTTCGGGCAAA
AAAGGTTCTCAAACAGTCtcaaaaagacattttttgaaTATGTATACTAT
TCTACTCTTTCTTGTTCAATAGACATTCAACTTAAAAGCTCACTTGACTC
GCCATCTGGCAAAGGCTCATGGCATTTATACATTGGATAGCAAGTTGAAG
GTGAAGACACCCTTCGTTATGTCACCAACACCTTATATGAGAGCAACACG
ACGTCTTTGCAAAGCCACTCTTCGTTTGAGACACTTCTCCAGATCTCCAA
CGGACACCATAGACAACATTGAAGTCAAGAACGAAGGTAAGATTCTTGCC
CTCAACCTCAATGGCAGCTCATAGCATGAACTGGTTATACCAATTTGACG
ATGAAGATATTTGAGTGACTCGTTTGAATTCCGTCTGAATAATATTTCTT
GGACATTTATTGTTCATTCTTGTTTTGAAACAAAAGCCactgttttaata
tttttgtattgttttagctttgaaAGTAGTTACAGTGGAAAAAGCAAAGT
CATTGATTGACAAACCATTGAAGAAGCGAGTAGTTGCTTTGGATTCAGTg
ttaagtgttttaaagaagCTGTCTGCAAGTAACAAAGCCAACTCACAAAA
TGCTTCACAAGACAATTCACCTGGAAGTCGAAGTGCCGCTTTCTCCCACA
CTTCTACTTCAATCACACAGAACTTGAAAGCGAAGAGTTTGAAAAGCCCG
ACTCCAATCATGCCAGGTGGTCACAAACGACCTGCTGATCAAGATAGCAA
TGGTATGTCTTCCAATCGACCATTCGTGATAACATTGCCTTTTGAATTAT
GACATTTAGCCTCTGATAGGTGATGttaaaaatatgtttaaaatttgtGA
TGGAGGTACAGTAAATAATCGTCCCAAGGTCCTGTATTATGAATTTAAAT
GACTTTTActtattgtattttttcttcTCCACAGACACGCCTTCAGCCAA
AAGGCAACAACAAATGCAAGCTTCATCGCCTCTTGGAAGAAAAGGGTATG
GTTGTGCAGAGTGTGGCAAAGTATTGCATAGCCAAGGTAACAATATAACA
GTTGATACGGTGTTTAGCACCAAATGATAGAAGTAAATTATTTGCAACTT
TTTAACCTCTTGAAAAAAACTCGTtggaaattgtttttatttttccttca
aCAGTGAGCCTTCAGCACCATATGCAAATGCACCACACAGACCGTGAGCA
AGTGGCGCCACAGATCCATGTTCCACAGAAAGACGGCCACAAACGCCACT
ACCAACAACACTACCACGACATGCCACCGCAACACCAGTCTTACTCCTCA
CACCACCCAATGAACCAACATTACCCCGATGTCAACGGTGGCAGCCGATC
TGTGGCTAAATCTTCAAGAACACCAACAGGATCCACTTCAAGGAAGCAGT
CATACAAAGGAATCGTTCAACAGAACCGTAGAGATCCTGACCTTCAATAT
GTGGATCCTCCCCAAGAATTCTTGTTCAATGCCACTAAAGAGTCCAGGTG
AGTGAATTTAGCTATAGGAGGCAGTTTTAGAACGTGAGAAATGCCATAAA
CCTTGGTTATTGTAACAGAAAAGTTATTTGCTTACTGTAGATGAAATCag
gtttttttaacaaaattttgaaataaatttatgaatttgCTCTACACAGT
TATGGAGCACTCTTTTAAATGGTGTTCAACAACAATATATGAAATCAGGT
TATAAATCATGTagaaattatatattatttattGTTCTATGATAGAAAAT
CAAGACGATCGTTGCCATCACGAGTGCAAAGGAAAATTGCTCGAAAACCG
TTCGTACAAATTAAATGCTCACAAGAGTTACGTGATTCCATTACATGCAA
GAAAAATGACATGAAAACGAAAACAGCCGACCCTATCGTTATTGATGACG
attgaatgcaaaaaaaaagttccaataaCTTTGGATGAACCGtagtcaaa
atatttattacCATTTTGTTTGCTTACGTCGTTGAATATGACTCTGAATA
CTGGAAGATTCTATTTGGAATTTTATTCAAACAAATCGAACACTGATGGC
TGAATTGATAGAGGTACAGGCAACCTGTAAACCTTAGACATTTAAatctt
tagaattttttttgtacaattaaatttgattgaaataaaatatccAATTC
TTAGCTTAAAATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005843XLOC_005843Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010397-exon-sc0000106-1491911889:101403..101543TCONS_00010397-exon-sc0000106-1491911889:101403..101543Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:101403..101543TCONS_00010397-exon-sc0000106-1510915933:101403..101543Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:101403..101543TCONS_00010397-exon-sc0000106-1575043694:101403..101543Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:102160..102227TCONS_00010397-exon-sc0000106-1491911889:102160..102227Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:102160..102227TCONS_00010397-exon-sc0000106-1510915933:102160..102227Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:102160..102227TCONS_00010397-exon-sc0000106-1575043694:102160..102227Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:102484..102504TCONS_00010397-exon-sc0000106-1491911889:102484..102504Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:102484..102504TCONS_00010397-exon-sc0000106-1510915933:102484..102504Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:102484..102504TCONS_00010397-exon-sc0000106-1575043694:102484..102504Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:103192..103264TCONS_00010397-exon-sc0000106-1491911889:103192..103264Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:103192..103264TCONS_00010397-exon-sc0000106-1510915933:103192..103264Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:103192..103264TCONS_00010397-exon-sc0000106-1575043694:103192..103264Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:103757..103886TCONS_00010397-exon-sc0000106-1491911889:103757..103886Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:103757..103886TCONS_00010397-exon-sc0000106-1510915933:103757..103886Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:103757..103886TCONS_00010397-exon-sc0000106-1575043694:103757..103886Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:104050..104231TCONS_00010397-exon-sc0000106-1491911889:104050..104231Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:104050..104231TCONS_00010397-exon-sc0000106-1510915933:104050..104231Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:104050..104231TCONS_00010397-exon-sc0000106-1575043694:104050..104231Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:104320..104416TCONS_00010397-exon-sc0000106-1491911889:104320..104416Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:104320..104416TCONS_00010397-exon-sc0000106-1510915933:104320..104416Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:104320..104416TCONS_00010397-exon-sc0000106-1575043694:104320..104416Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:104846..104945TCONS_00010397-exon-sc0000106-1491911889:104846..104945Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:104846..104945TCONS_00010397-exon-sc0000106-1510915933:104846..104945Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:104846..104945TCONS_00010397-exon-sc0000106-1575043694:104846..104945Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:105130..105247TCONS_00010397-exon-sc0000106-1491911889:105130..105247Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:105130..105247TCONS_00010397-exon-sc0000106-1510915933:105130..105247Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:105130..105247TCONS_00010397-exon-sc0000106-1575043694:105130..105247Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:105506..105576TCONS_00010397-exon-sc0000106-1491911889:105506..105576Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:105506..105576TCONS_00010397-exon-sc0000106-1510915933:105506..105576Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:105506..105576TCONS_00010397-exon-sc0000106-1575043694:105506..105576Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:105819..106059TCONS_00010397-exon-sc0000106-1491911889:105819..106059Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:105819..106059TCONS_00010397-exon-sc0000106-1510915933:105819..106059Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:105819..106059TCONS_00010397-exon-sc0000106-1575043694:105819..106059Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:106231..106353TCONS_00010397-exon-sc0000106-1491911889:106231..106353Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:106231..106353TCONS_00010397-exon-sc0000106-1510915933:106231..106353Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:106231..106353TCONS_00010397-exon-sc0000106-1575043694:106231..106353Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:106491..106627TCONS_00010397-exon-sc0000106-1491911889:106491..106627Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:106491..106627TCONS_00010397-exon-sc0000106-1510915933:106491..106627Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:106491..106627TCONS_00010397-exon-sc0000106-1575043694:106491..106627Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:106775..106988TCONS_00010397-exon-sc0000106-1491911889:106775..106988Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:106775..106988TCONS_00010397-exon-sc0000106-1510915933:106775..106988Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:106775..106988TCONS_00010397-exon-sc0000106-1575043694:106775..106988Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:107170..107454TCONS_00010397-exon-sc0000106-1491911889:107170..107454Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:107170..107454TCONS_00010397-exon-sc0000106-1510915933:107170..107454Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:107170..107454TCONS_00010397-exon-sc0000106-1575043694:107170..107454Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:107637..107738TCONS_00010397-exon-sc0000106-1491911889:107637..107738Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:107637..107738TCONS_00010397-exon-sc0000106-1510915933:107637..107738Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:107637..107738TCONS_00010397-exon-sc0000106-1575043694:107637..107738Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:107857..108199TCONS_00010397-exon-sc0000106-1491911889:107857..108199Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:107857..108199TCONS_00010397-exon-sc0000106-1510915933:107857..108199Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:107857..108199TCONS_00010397-exon-sc0000106-1575043694:107857..108199Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1491911889:108448..108866TCONS_00010397-exon-sc0000106-1491911889:108448..108866Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1510915933:108448..108866TCONS_00010397-exon-sc0000106-1510915933:108448..108866Clytia hemisphaericaexon
TCONS_00010397-exon-sc0000106-1575043694:108448..108866TCONS_00010397-exon-sc0000106-1575043694:108448..108866Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000106supercontigsc0000106:101403..108866 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
103.023	87.2504	174.867	161.723	33.5982	21.1274	55.1604	30.1976	88.3843	105.003	77.4163	62.2165	77.3951	77.0788	77.5312	79.8717	109.59	119.471	47.5032	41.5338	60.7818	64.7552	65.4793	65.17	4.76242	8.06116	40.8224	44.3671	39.7273	46.3965
Blast
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BLAST of TCONS_00010397 vs. Swiss-Prot (Human)
Match: MTA3 (Metastasis-associated protein MTA3 OS=Homo sapiens GN=MTA3 PE=1 SV=2)

HSP 1 Score: 470.7 bits (1210), Expect = 9.442e-154
Identity = 264/567 (46.56%), Postives = 359/567 (63.32%), Query Frame = 3 
Query:  117 ASNIYRVGDYVYVETQPSHPYQIRRIEELTKTSNGQVEAKVSCFYRRRDLSNVLGREADKHVQSAEIEGEINVGSDILSDEQNHQLKLREVFLSRQLEIINANTIRGKCSVTLYSEVEALLDYLKEEDWFYYLLVYDPQQKTLLADRGEIGVGDEYQTEVEDEMAKGELQNNDE--LETLVWDPENPLSDKQVDQFLVISRSIGTFARXXXXXXXXXXXXXXXXXXXXXRDITLFQALTLLHKSNYDVGKASLSLVPDGGPILCRDEMEEWTSGEATLFEEGIRKHGKEFNEIQQEYLPWKSISSIIEYYYMWKTTDKYVQQKRMKAQEGDSKVTQIFIPSS--------NTAINLTLAIQASSQYQVTPSGSLVTPNYMCESCFCKESVLWYPWGPATSSCKLYLCKDCWVYWKKCGGLKKSTKSNESGNDAKEACYKCRICNKKFNRAERLSSHMATHRGYDCTEPGCGKTFNLKAHLTRHLAKAHGIYTL---DSKLKVKTPFVMSPTPYMRATRRLCKATLRLRHFSRSPTDTIDNIEVKNEALKVVTVEKAKSLIDKPLKKR 1778
            A+N+YRVGDYVY E   S+PY IRRIEEL KT++G VEAKV CFYRRRD+SN L   ADKH +  E E E  V +D L+D+Q HQLK RE+FLSRQ E + A  IRGKCSV L +E E++L YL +ED F+Y LVYDP  KTLLAD+GEI VG  YQ ++ + + +GE    ++  LE  VWDP +PL+D+Q+DQFLV++R++GTFARALD SSS ++ SLH+SAAAASRDITLF A+  L++ +YD+  A   LVP GGP+LCRDEMEEW++ EA+LFEE + K+GK+FN+I+Q++LPWKS++SIIEYYYMWKTTD+YVQQKR+KA E +SK+ Q++IP+         +T+     A+  +      P   L+     CESC+  +S  WY WGP    C+  LC  CW+YWKK GGLK  T+S E                      E+LS    T       +P       +++H++R   +   +       S +K +  F +  T + +  R++CK TLRLR  +R P      + +   A++    ++   L   PLK +
Sbjct:    2 AANMYRVGDYVYFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLADKHAKEIEEESETTVEAD-LTDKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESVLSYLDKEDTFFYSLVYDPSLKTLLADKGEIRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEMEEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPTYSKPNPNQISTSNGKPGAVNGAVGTTFQPQNPLL--GRACESCYATQSHQWYSWGPPNMQCR--LCAICWLYWKKYGGLKMPTQSEE----------------------EKLSPSPTTE------DP------RVRSHVSRQAMQGMPVRNTGSPKSAVKTRQAFFLHTTYFTKFARQVCKNTLRLRQAARRPF-----VAINYAAIRAEYADRHAELSGSPLKSK 524
The following BLAST results are available for this feature:
BLAST of TCONS_00010397 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTA39.442e-15446.56Metastasis-associated protein MTA3 OS=Homo sapiens... [more]
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