XLOC_041216 (mRNA) -

Overview
NameXLOC_041216
Unique NameXLOC_041216
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:68086..68687+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041216 ID=XLOC_041216|Name=XLOC_041216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=602bp|location=Sequence derived from alignment at sc0000001_pilon:68086..68687+ (Clytia hemisphaerica_ch_hm2_pilon)
CCGATCACCCACGAACTAAACGTGGATGTTTTGGAAGTCGTTTTACATAA TCCTTCTGACAGCTCACTTTGTATTCCGGCTCACTGGCCGTTAGTACGCG CTTCGAGAATAGATCTTGATACGGTTACAAAACCTATTATCTCCGTAATG ACTCATCCTCTGAAAAAGGCGTCGCCTTCGAGTAATGATTTTGATCTTAC TAGGACCTCCTTGGCCcaacaacaaaaagaagaaataagaCAAAAAGGTT TGATTCCAAAATACATTGGCCCTAGAAAAACCGCGAACCAGATTGATGAT AGCAAAGACGAAATTCCTTCAGCCGCCCTAAGAAAAGTATCACGTCGTCA ACCGAAAACGAATGCAATTATTGCCACAAACAAGTCAAAACAGATCGATA TTTTCCAACCAAGTTCCAAAAAGACCGTCAATAGTTTCAGGCCAGGTCTC ACCAGTCGTTTGCTATTAACACTCCTTGTTTCCATGTCCTTATTCAGTTT TGACAGATCAATTAACCTACTAGATCCTTTTATAATTGCGCAAAAGTCAA GCCAGCCGATATTTACAAAAACTGTATAGTTCCAAAATCTTGCGAAAAAC TT

Coding sequence (CDS) from alignment at sc0000001_pilon:68086..68687+

>XLOC_041216 ID=XLOC_041216|Name=XLOC_041216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1204bp|location=Sequence derived from alignment at sc0000001_pilon:68086..68687+ (Clytia hemisphaerica_ch_hm2_pilon)
CCGATCACCCACGAACTAAACGTGGATGTTTTGGAAGTCGTTTTACATAA
TCCTTCTGACAGCTCACTTTGTATTCCGGCTCACTGGCCGTTAGTACGCG
CTTCGAGAATAGATCTTGATACGGTTACAAAACCTATTATCTCCGTAATG
ACTCATCCTCTGAAAAAGGCGTCGCCTTCGAGTAATGATTTTGATCTTAC
TAGGACCTCCTTGGCCcaacaacaaaaagaagaaataagaCAAAAAGGTT
TGATTCCAAAATACATTGGCCCTAGAAAAACCGCGAACCAGATTGATGAT
AGCAAAGACGAAATTCCTTCAGCCGCCCTAAGAAAAGTATCACGTCGTCA
ACCGAAAACGAATGCAATTATTGCCACAAACAAGTCAAAACAGATCGATA
TTTTCCAACCAAGTTCCAAAAAGACCGTCAATAGTTTCAGGCCAGGTCTC
ACCAGTCGTTTGCTATTAACACTCCTTGTTTCCATGTCCTTATTCAGTTT
TGACAGATCAATTAACCTACTAGATCCTTTTATAATTGCGCAAAAGTCAA
GCCAGCCGATATTTACAAAAACTGTATAGTTCCAAAATCTTGCGAAAAAC
TTCCGATCACCCACGAACTAAACGTGGATGTTTTGGAAGTCGTTTTACAT
AATCCTTCTGACAGCTCACTTTGTATTCCGGCTCACTGGCCGTTAGTACG
CGCTTCGAGAATAGATCTTGATACGGTTACAAAACCTATTATCTCCGTAA
TGACTCATCCTCTGAAAAAGGCGTCGCCTTCGAGTAATGATTTTGATCTT
ACTAGGACCTCCTTGGCCcaacaacaaaaagaagaaataagaCAAAAAGG
TTTGATTCCAAAATACATTGGCCCTAGAAAAACCGCGAACCAGATTGATG
ATAGCAAAGACGAAATTCCTTCAGCCGCCCTAAGAAAAGTATCACGTCGT
CAACCGAAAACGAATGCAATTATTGCCACAAACAAGTCAAAACAGATCGA
TATTTTCCAACCAAGTTCCAAAAAGACCGTCAATAGTTTCAGGCCAGGTC
TCACCAGTCGTTTGCTATTAACACTCCTTGTTTCCATGTCCTTATTCAGT
TTTGACAGATCAATTAACCTACTAGATCCTTTTATAATTGCGCAAAAGTC
AAGCCAGCCGATATTTACAAAAACTGTATAGTTCCAAAATCTTGCGAAAA
ACTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041216XLOC_041216-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:68086..68687 +
Properties
Property NameValue
Aaloc625-693:534
Aaloc397-621:307
Aaloc103-396:1