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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:673590..677060- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041102 ID=XLOC_041102|Name=XLOC_041102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3471bp|location=Sequence derived from alignment at sc0000023_pilon:673590..677060- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCATAACTACGCCCGTAAACAATATCCATCCATACAGCAACCGCC
TAATTCAAATAACGCCCATTGGTCGAACAGTACAGGTAGAAAAATACGCT
ATCACGAAGCTCCAACATACGCCCAAGAACCACCTGCACCTTATACAAGC
AATAACAACTTTGGGGGCGGTGGAGGCGGGATTGACAATGGAAAAAGGAT
CGAGATTACAAGAGAGATTTTCAAAGTACAAAGGGTGAGAAATATTGAAT
TAAAAAAATGATGAAAATTTCCAAATTTCAAGGAAATTACTTTTAATTGT
ACTTTGATTACACACTCAGACTCGAATCCAGTCCCTTAGCCCGCTTTTTT
ATGATTCTGATAGCGCTCAGAAGAGGTTTGTATCACGTCCATCAGTAAAA
TTAAAAAGTGGTTCAAGTGACTCAAAAATGAAACTCGTCTAAACTTGATG
TATTAGTCTGACACTAGTACCCATTCTCTTGAGCTGGTCGTGACTTCTAG
TATTTACCAAAAACATCTTCCTTGGTCCTATTTGCAGGCCCTCTCTCAAA
AAAGTCTCAAAATCCTATCTACTTTCGAACCAATCAGATACGGTTGCATC
CCACAAAAAATACTACGCATCCTAAGGTTGGTTTCTTAAAACACCTTTTC
GACCGTAGACGCCAATTGCGGCGTGGGCATTTTTTTGTCCGTTTTTCCAC
CCTAAGACCGTACTAATCTTTTTTTCGCACCTAAAGACAATAGAAAAAAT
TGGATTGGAGCGAATTTACGGTGGTAAATCAAATATTGAAGTGGCACGCA
CCTGACCGCGCGACTACAGTCGAAAAGGCGTATACGCTATTACTAATGTT
TTTCAATCTTCATTTTCGTCTTCCTTTAGAGATTCGATTTAGTGAAATGG
TTTAAACGACACCCAAAGACCGTCATGTGTTTCTCTTATTTCTGTGTTCT
CATCATTGGTATTACACTTGGATTTGTACCTTACATCACAATGTATATGA
ACGCTTGTCAATGTAAGGAATTCTTTAATGTTTTCGAAAAAAATAAACTG
TTTTCAATGTACCTAACTTTTTCCGCTGGGACCCCATCCCCACTGGCCGA
AATCTGGAATGAAAAATGGAATTTCAGCCCCATAGGGAAATTGACTTTGA
TTTCATCTTCGCTAGAAATCAAATGCTCAGAAATTGCACTCCAAAACCAC
CCCACTGAATTTTTCAACCTTGGAACAAAATAATTTCCATCCCTATTAGG
ATTTCAATAGGAATTTCTATCCCCACTGAGAAAAAAGTTTCACCGGGGCT
GTGAGACAGAGGTGTATTTGTCTATTAATTCAAAAATAAGATTAGAATTG
GCAATCGATTTCGAGCCATCCAATCACTGTATTTCTTTCTGTTGTCAATA
TTAAACCTTGCTGCTGACGAAATTTGATTGCAATTTAATTGGGGAGTTAA
GAGTTACCTCCGTCAAACTCTGTTAGGCCGTCAGGAACCAAAATTCCACC
ATTGAAAGTATTTTTTGAGATTCAAGAATTTTGTCAATAATTTCGGAAAT
ATTGAATATTCTTTTACAAATTTCGAAATTTCAACCAAATTTTGGCGAAA
TTCTAAGGCTAACCTATTTTTCGAACCACCGTCGTCCTGATTTTGCTCAA
TATCCGCCAAACCGTTCAAAAAAGAGCCAATTCTGCTCATCGATCAACTT
TGAAACCATCCCATAGAATTCGTAAAAATACCCTACACCCCTTTCTCACA
GCCTCGGTGAAACTTTTTTTTTACAGCGGGGATAAAAATTTCAATTGAAA
TCTCAATGGGGATAAAAATTCTATTATTTCATCAAGGTTAAAAAATCCAG
TAGGGATGGTTTTGGAGTGCAATTTCTAAACAATGAATTTCAAATGGGGA
TGAAATCAAAGTCATTTTCTCAGTGGGGCTGAAATTCTAGGGTACCTTTC
CTACCAGGGACGAAATTTTTGCCAAAATTTCCAGTGAGGCTGGGGCCCCA
GCTGGTCTGTGACAGAACGGTGTTACCATGCTCAAAATGAATTTTATTAA
AGAAAAATATGTTAAAAAAAAACATTAAATATTAATTTTCCTTCGATTAT
AATCTTTTCTTTTCTCGCCATAGCTGATAGGAAACTGTTGACAGATTTCC
AAGGCTTAATAGAACGTTACAATGATACAAACATTGTCACTAATACTGGA
GCAAGCAGTGGTGGAATGCCGTTGACTGGTAAGACATCTCCAGAGTTTGC
TATGATATAACCCTAAAAAAACTCAAGAATGATAAAGAAGGAGTTACTAA
AAACACAATGGACTATCAAACCTTTGATCTTATCTGAAATTTCATGCTAT
TTCCAAGCTCCAATGGTATTTGATAGTTCAATGGGAGGAACTCTTTGGAG
GGTCTTATAGTTTGTCCTTTTATCGGCTTCCTAGCAGCCATACACTCTTG
CGTAGGAGAGCAGAGTAAGGAAGCTGTAAGAGTTATACTTTTGAGCCCCG
AGGTTTTGTCAAGAGCTCTTATATGATACACCTTTTTGTCCGTAGCCGCC
AATTACCGCGCGGGCATTTCTTTGTTCGTTTTACCACCCTAAAACCGTTC
CAGTCTTTTTTTTCGTACCAAGAGACAATAGAAAAAGGCGTAAAAAAGGA
TTGGATCGAGTTAGGAGGATAATTAAATAATAAAGTGACACGCGCCTGAC
TGCGCGACTGCGGTCGAAAAGGTGTATTTAAGACGAATTTTGTTAGTACT
AAGCTGTCCATCCAAAACTCTTTTAAATTACCATATGAATACTTTTTCGA
AAATATCTCCTTTTATTTTGTTTCAGCACCTGTTTACGGTATGCTTCCAC
ATAGAGGTATGCTCAAGATTTTTTTAACATAGATTTCATGCTCTTCTAAC
ATTCTAGTAATTCTAACCGCAGCTCTTTTAGCATCCTCGACAGCTTATCA
CTCAATATGACACCAAACCTGCAAGCCTGAAAACTTAGATAAAGTAGAGG
ATAATATAAATAAAGAGTTCTAATCTTAACAAACCTGTGGCGACCAAGAG
ATATTTTCACTCCTCTCAAAATTCTTTAAACTAATATGACACTTTGGAAA
ATGGTGACTTTTGATGGACTTATTCCTCGATCTAGATGCCTTTCTACCCT
TATTCAATGATCGGCTTTGTCAGTCCTTTATTGAATTTTAAAGGTTCCTT
ACTGCAGTCATTTTCTTTTCTAGCATCTGCAAGAGGGAATCAAGAAATTG
AGCTTACATGTCAAGGGGCCATCCACATCTCAGATATTACGTATAACGGT
GTCCGTGGCACCACCGACGACGTCAAAAATTTGAATAAATACTGCGCTAA
GCAGATTATCCAATCACGAGACACCAAACGTTGCGTGGTCAGTTTACAAT
TGGTGTATAAGAGGGGAATGTACGGTGAAGACACTGTCACGGATATTTAT
TACCGTTGCGTGAAACCGTGA Coding sequence (CDS) from alignment at sc0000023_pilon:673590..677060- >XLOC_041102 ID=XLOC_041102|Name=XLOC_041102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1500bp|location=Sequence derived from alignment at sc0000023_pilon:673590..677060- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCATAACTACGCCCGTAAACAATATCCATCCATACAGCAACCGCC
TAATTCAAATAACGCCCATTGGTCGAACAGTACAGGTAGAAAAATACGCT
ATCACGAAGCTCCAACATACGCCCAAGAACCACCTGCACCTTATACAAGC
AATAACAACTTTGGGGGCGGTGGAGGCGGGATTGACAATGGAAAAAGGAT
CGAGATTACAAGAGAGATTTTCAAAGTACAAAGGATGCAGCATAACTACG
CCCGTAAACAATATCCATCCATACAGCAACCGCCTAATTCAAATAACGCC
CATTGGTCGAACAGTACAGGTAGAAAAATACGCTATCACGAAGCTCCAAC
ATACGCCCAAGAACCACCTGCACCTTATACAAGCAATAACAACTTTGGGG
GCGGTGGAGGCGGGATTGACAATGGAAAAAGGATCGAGATTACAAGAGAG
ATTTTCAAAGTACAAAGGAGATTCGATTTAGTGAAATGGTTTAAACGACA
CCCAAAGACCGTCATGTGTTTCTCTTATTTCTGTGTTCTCATCATTGGTA
TTACACTTGGATTTGTACCTTACATCACAATGTATATGAACGCTTGTCAA
TAGATTCGATTTAGTGAAATGGTTTAAACGACACCCAAAGACCGTCATGT
GTTTCTCTTATTTCTGTGTTCTCATCATTGGTATTACACTTGGATTTGTA
CCTTACATCACAATGTATATGAACGCTTGTCAATCTGATAGGAAACTGTT
GACAGATTTCCAAGGCTTAATAGAACGTTACAATGATACAAACATTGTCA
CTAATACTGGAGCAAGCAGTGGTGGAATGCCGTTGACTGCTGATAGGAAA
CTGTTGACAGATTTCCAAGGCTTAATAGAACGTTACAATGATACAAACAT
TGTCACTAATACTGGAGCAAGCAGTGGTGGAATGCCGTTGACTGCACCTG
TTTACGGTATGCTTCCACATAGAGCACCTGTTTACGGTATGCTTCCACAT
AGAGCATCTGCAAGAGGGAATCAAGAAATTGAGCTTACATGTCAAGGGGC
CATCCACATCTCAGATATTACGTATAACGGTGTCCGTGGCACCACCGACG
ACGTCAAAAATTTGAATAAATACTGCGCTAAGCAGATTATCCAATCACGA
GACACCAAACGTTGCGTGGTCAGTTTACAATTGGTGTATAAGAGGGGAAT
GTACGGTGAAGACACTGTCACGGATATTTATTACCGTTGCGTGAAACCGT
GACATCTGCAAGAGGGAATCAAGAAATTGAGCTTACATGTCAAGGGGCCA
TCCACATCTCAGATATTACGTATAACGGTGTCCGTGGCACCACCGACGAC
GTCAAAAATTTGAATAAATACTGCGCTAAGCAGATTATCCAATCACGAGA
CACCAAACGTTGCGTGGTCAGTTTACAATTGGTGTATAAGAGGGGAATGT
ACGGTGAAGACACTGTCACGGATATTTATTACCGTTGCGTGAAACCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:673590..677060 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 505-750:247 |
| Aaloc | 475-501:644 |
| Aaloc | 370-471:1347 |
| Aaloc | 235-366:2593 |
| Aaloc | 1-234:3472 |
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