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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000141_pilon:172523..178465- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040913 ID=XLOC_040913|Name=XLOC_040913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5943bp|location=Sequence derived from alignment at sc0000141_pilon:172523..178465- (Clytia hemisphaerica_ch_hm2_pilon)
GATAAAACAGTAAATAGAAACTTTAAAATGAGTGAAATCACATTATTTCA
TGGAAAAGATGAAAAAACTTCAGTTTCTGTGCATACTTGTGGTGCAACAG
TTACATCTTGGAAAATTAATGGTCAAGAAAAGATTTTTGTTAGCACTCTT
GCTAAACGTGATGGAAGCAAAGCTATAAGGTATTTCATAATATTACAAAC
ATTTCAATCAGCTTCGGCAAAATTAATTTTTACTGTAGAAAACTAGACAA
ATAGTATTGGTTATCGGGCATTTTGTTTTGAAAGTTGATGTTGTGGGAAC
GTTTACGTCAAAAAGGTGATGAAAGGAGTCGGTTTATCGTATGACGTCAA
AATATCAAAGTCTTTTTATTGGAGTGCTGACAGATCGAAATACATACGTA
TTTAGTGTCATTCAACTCCAATAGACTCTGACTCAACCCCCTTTGGTTTT
ATGAGTTATAAAAGCAACATTATTGACGATCAGATATTGTTAATCCTTAT
CTATAATATACCTTAAGCGAATTATTTTTTGCGGGGTTAAATTTGACGAA
TTTATCCTGGTCAAAACTTTTGGCTGATCGCCAAATTTAGTCCACGCAAA
AATTAATCCACTATGAAATTATAGTAAAAATCAATCAACGATACCAATAT
TGTTTTTCAGAGGTGGAATTCCTTTATGTTTTCCACAATTTGGTCCATGG
GATAGTGGCAGACCACAGCATGGTTTTGCAAGGAACTCAAACGATTGGGT
TTTGAAAGAAAAGAAAGTGGACACGAATGGAGATGCAACAGTGAGTGGCT
TTATTTAAACTCTTAGTAGTTTATTTTAAAAGTGATGTTGCTTTTGTCAA
TGTTGTGCGTGTCTTAATGCTCACTTATGTTATTTGCTTGATAAAGCCTT
GTCAGGAAAAAGTAAGTCGAAATCCCACTCAACAAAAAGTGCACACCCTT
GGAAGATGTTGAAGAAAGAAAGCTTTTTATAATCGATCATGCCATGGTAT
ATCCTCATCAACCTTCCATGACATTTTTTAAGACCCCCCCTAAACCTTAG
TTTAATATGAAAACAGTCAGTTTTCCCAGAGACAAAGTTTTTATCTTCCT
TTCCATTTAGACATGACTATTGGCTTTTCTGTTTAGATTGTTATGGTGCT
TACTGACAATGAAAACACAAGAAAATTATGGGATTTCAAATTCACGTTTT
TGTATACCGTCAAGCTTACTCTGACTGAATTGACATTAAATGCAAGCGTG
GAGAACAGAAGCGACAGTGACTTTGATCTGACATTTTGCTTTCACACTTA
TTTGAAAGTTCCTCAAATATCTGGTGCCACAGTTCAAGGTGAGATTCACA
GAACTCTAAAATAAGGACTGGAACAAAATGGTTTTCAAATAAAGATAAAA
GTTTCAAAAGATTATATTTCCATTTTTGATACTTTTTAATGATCCATTAT
TTTTCAGAAAAGCAAGTTTTTTTGCTGTTATTCATTCTGGTGTTGATTTT
TGAGTTTTTGTTAAAAGTCTCAATTAAAAAAAAGATTACTCTATTTATTT
GTGACCTGCTAGTGTCTTTGAGGTTTTATCGATCAAAAACCTAAATTTAT
GTAGTTTCAATTTTGGCTTTACTCAGCTGGTTACATGTGAAAGTGGAAGT
GAGATTGGTGTATGCTTTAGATTAACGGCAAGCTTTGATTTACACCAACC
ATTTTTACGCTCATTTGCAGCATTGTTAGATGTGTGTAGCATTTGTAAAC
AGCTTAACTATCGAGCATTTGCAGTCTGTTTATTTCAAAAAGAAAATCGC
TCAAAGTTAAAGCATCATGCACGGAGAAGAATATTGTCAAATAAATCATC
AAAATGCAGTGGTTTTAACTCCTGGAAATCTGTCTAGTGGAAATATTTTT
TAAGTATTTTTGTCACACTCAATAAACCTTGAAAGAAGAAAATTCGTTAA
TTAAACTCAACGTCACTGTCCATATTCACCAACGTCCCGTCCATATTCAC
CGACGTTCCGTCCATATTCACCGACGTCGATTTCACACTGAAAATGACAT
TCGATGAGACGACGTGGCTTAATGATTCGTCTCCTGTCTCCCCAATCAAA
GAACCCTGGAGCAATCACGATGCAGTCGATGCACCTCTATGTAAACAATG
TGAAAACTTGAATCTTGCATTTCTGGATCCGAATTGTAAAGGATGTTATA
GATTGATAATCGATCCTAAAACGAGCATTGCTCAATTGTTTGCCATCATA
CGACAATGGGTTCCACAAGTACAGAAAAATATGGATCTACTCGTCACAGA
AATCCTCAAAAGAGGTTTAAATATAAACGATCGAGATAACCTGACCGACA
TGACTCTGTTGCATTACGTTGCGAAAGCAGGAGCTGATGGAATGTCTGAT
CCTCAAAGGACAGCTGAACTGACCAGTTCTTTGATCAATAAAGGGATTCT
GATCAATGCAAAATGTCAATGGACAGATATGTCAGCTTTGCATTATGCAG
TATTCTTTGATGCTTACTCTGTTGTGAAAGTCATCCTTGACAACGAGTCG
TTTAATGATTTGGACAGACCTTGTAAGGAGTATAATGGTGGAAGTGTTTT
GCATATTGGGTGTCAGAATCTGAGCTTCAAATCTGTTTCATTGCTACTTG
AGAACAGTTCCAATCCTCATTTTGTGGATGAAAGTGGGAAGAAACCGATT
GATTACATACCCAATGAAGACGAAATTGAAAATGAAGATGTAAAGAAGAT
CGCTTCACTCATGAGAGATGAACTGACTGTAGCTATGCAAAATATTGATC
CACAATTCAAACAGAATTTAAACCACGCCGTACTAAAAGCATTAGGGTTA
GATTTACATAGTCGGGTTATTGTTGCTGGCAAAGTTGGATTACTTAGATT
CGCAGGATCAACTGAATTTGCATCAGGTGTATGGGGCGGTATAGAACTCG
AAGAAAAGACTGCTAAAAATGATGGTAGTGTGGCTGGGGTGCAATACTTC
CAATGTAAACCGAACCATGGTATTTTTACGCCGTTAACGCTAGTCAAGAA
ATTTGATGTAGACTATTTACTAGTCTCTCCTTCTCCTCCCGCGTCACCAG
TACCTGCGAACACATCTGCATCCTTCGATAATGTTGCAATGTTTGGTTTG
ACGCTTGGAGAAAAGGTCATTGTTGCCGGTCAGAAGACCGGATTTGTTCG
ATACCGTGGACCAACAAAGTTCTCCCCGGGTACTTGGGTTGGCGTTGAAC
TTGAAGATCCCGTTGGGAAAAATGATGGCTCGGTAGGAGACTTTCGTTAC
TTTCGATGTGAGCCTGATCGTGGTATATTCGCTCCACTTCCTCAGATACA
AAGGATAGAGGAGGTTATCGAGGAAGAATGTAGTTCAATCGAAATACCGA
ACACCATCAAAAAATTTCAAATGAAGAAGCGGATTGAGGGAGATGGAGAG
AAAAAGAAAATATTCTTGAAATTAGATTTGAAGTCCATTACACCTCAAGA
AGACATTGAAGAGGAGAACGACCGAGACTCACTTGAAGAGAGTGAACAAA
AATCAAATGAAAAACGTAAACACTCCAGGATCAATCCTGGTGTTAGTGCA
AACATTCAACAGCTCAGCCAACCGAAGAGAAATCACCAAAAACTTGACCG
AACCTTGGGCGCTCAAATTAACTTCACTTTAAAGACGGGGATGAGTGTTT
ATCTTAATGGACAACTTGGTTTAGTTAGATTCATTGGACGTGTTGAATTC
GCCAAAGGCGTTTGGTTGGGCGTTGAATTGAGAAAGCCTTACGGGAAGAA
CGACGGGTCAGTTGAAGGGCGCCGGTATTTTACGTGTGAACAGAATTACG
GTTTAATGACACGCCCATCAAGGGCGACATGCCGTGGTATCAATTGTGAA
CAGTTAATCGACCTCAAATTCAGATGATCTCCTCTCACCAACGCCAAAGC
TGAACGTATTTAGCTGTTTCGTTGTTTCGTTGAGTCCACATTTAATACGA
ACGACAATGATTCCATACTAAGAATATTATTATTGTTCACTTGAATGGTG
ACCCTCCTCATTTAGCCGTTAATATTAATAAAGCTTTTCTAGTTTTTTTT
ATGAACATGTTTTGTATATCATAACGATGAACCTATAATATCTTACAATC
TTAAACAATATATTACAATCACTTCAAAGTTGGTCAGTACGAACTATCCA
TCTTGACTGACGTCAAGAGGTCTGGATTCGATTCTCAATTGTTTTTGTCA
TTCGTTTTGAAGCTTTAATGCACCCTTGTCCCTGCCAATCTATTCCGTTG
GAAAAGATAGGTTTGCAATAACTCTGTCCTGTCGGTGATTGGGCTATGTA
TGTGTTGGTTGCGAAATTCATCTTGAATGATGCGAAAGTGAATAAGCTTA
AACTTGTCTATGCATATTTTACGCCTCCATTTAAAAGTCACACATCAGTG
TCTCGGCAGTTTTAACCGTCGCAGTGACGTCTCTAATTAACTATACGACT
CGTAGACGGCTGATGAGAAACCTCGAACCCTCTTAAAAATGAATCCTTAC
CCATAAATGGATTTCTTTTTTTACAGGGCTGAATGGATTAACTTATGTGG
ACAAAACAGAAGGAGGTCAACTAACAATAGAAGAAAATGACGTCATTAAG
ATTGAAGGATTTGTAGATCGTGTCTATCAAGATGCACCTGACGTAGTGGT
GGTTCAATTGCATGACAAAGAGAAAATCACTCTCAAAAAAGTATGTACTT
TCATTACAATTTTCACGTTCTCGGGTCTTGTTTTTCCGAGTTAAAGATTG
CATTTTTTGTTTTCAATTATTCAAACTGGCTGAAGAACTTTGTATTGAAG
CACTGACGTGGTTAAGTGGCGATGGTCTTCTTTCGATTCTTTGCCACGGA
AATTCATGTGACATCTTTTTTAACCAATAAGATTTAATAATTTCGAGGGT
AAAACAAACACTATGGTTTAACTCACTAAAAGATTATGTTTACCGGAAAC
ACATAATCAATCTTTAGTAAGTGTTCTGTTGTACCCCAGTTCTGACGTCA
TGCCGTGACGAAGAATAGCTATCTAGTCAAATGTAGAATCTGAAGGTAAC
CTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACTCTTC
TTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCT
CCCTGCACCACTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGC
ACCACTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACC
TCTTCTCCCTCCCTGCACCACTCTTCTTCCCTCCTGCACACACTCTTCTT
CCCTCCCTGCACCACTCTTCTTCCTCCCTCTTCCCTCCTCCCTGCACCAC
TCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACTCTTCT
TCCCTCAATTGGAGCACTGAAACAAGAATTTGTAAATACGATCGTTTGAT
ATTTTGTACCCTAACCATGACCAGAATAACATAACCCCTTCTGTCTCATT
TTTACTGATTCTCACCAATCAGATTTCTTGCTTGTGCGAGTTTCGAACAA
CGTGGCTCGACACTAAACAGTACGTAACTATAGAATGAAAGCTTTTCAGA
ATGATGTCTTTTAGAAGGCGCACGACGTACCGAACAAAGCGTCAATGAGT
GTTTCTCGTTTTACATCTGCTGATATTCAGCTTTACAAGAATTTGCTTTC
TTCGTTACAGAACAACCTTTGTGATTACGTTGTTTGGAATCCATGGCAAC
AGAATTGTTTAAAGATGGCTGACATGGATGATGACGGTTATTTGAGCATG
ATTTGCGTGGAAGCCGCGCATGCGTCGAAGAGAAGTATCGTTAAAGCAGG
TTCCACTTGGAACGCATCTCATGTTTTATCGAGTAGTCAGTAA Coding sequence (CDS) from alignment at sc0000141_pilon:172523..178465- >XLOC_040913 ID=XLOC_040913|Name=XLOC_040913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1716bp|location=Sequence derived from alignment at sc0000141_pilon:172523..178465- (Clytia hemisphaerica_ch_hm2_pilon)
GATAAAACAGTAAATAGAAACTTTAAAATGAGTGAAATCACATTATTTCA
TGGAAAAGATGAAAAAACTTCAGTTTCTGTGCATACTTGTGGTGCAACAG
TTACATCTTGGAAAATTAATGGTCAAGAAAAGATTTTTGTTAGCACTCTT
GCTAAACGTGATGGAAGCAAAGCTATAAGGATAAAACAGTAAATAGAAAC
TTTAAAATGAGTGAAATCACATTATTTCATGGAAAAGATGAAAAAACTTC
AGTTTCTGTGCATACTTGTGGTGCAACAGTTACATCTTGGAAAATTAATG
GTCAAGAAAAGATTTTTGTTAGCACTCTTGCTAAACGTGATGGAAGCAAA
GCTATAAGAGGTGGAATTCCTTTATGTTTTCCACAATTTGGTCCATGGGA
TAGTGGCAGACCACAGCATGGTTTTGCAAGGAACTCAAACGATTGGGTTT
TGAAAGAAAAGAAAGTGGACACGAATGGAGATGCAACAAGGTGGAATTCC
TTTATGTTTTCCACAATTTGGTCCATGGGATAGTGGCAGACCACAGCATG
GTTTTGCAAGGAACTCAAACGATTGGGTTTTGAAAGAAAAGAAAGTGGAC
ACGAATGGAGATGCAACAATTGTTATGGTGCTTACTGACAATGAAAACAC
AAGAAAATTATGGGATTTCAAATTCACGTTTTTGTATACCGTCAAGCTTA
CTCTGACTGAATTGACATTAAATGCAAGCGTGGAGAACAGAAGCGACAGT
GACTTTGATCTGACATTTTGCTTTCACACTTATTTGAAAGTTCCTCAAAT
ATCTGGTGCCACAGTTCAAGATTGTTATGGTGCTTACTGACAATGAAAAC
ACAAGAAAATTATGGGATTTCAAATTCACGTTTTTGTATACCGTCAAGCT
TACTCTGACTGAATTGACATTAAATGCAAGCGTGGAGAACAGAAGCGACA
GTGACTTTGATCTGACATTTTGCTTTCACACTTATTTGAAAGTTCCTCAA
ATATCTGGTGCCACAGTTCAAGGGCTGAATGGATTAACTTATGTGGACAA
AACAGAAGGAGGTCAACTAACAATAGAAGAAAATGACGTCATTAAGATTG
AAGGATTTGTAGATCGTGTCTATCAAGATGCACCTGACGTAGTGGTGGTT
CAATTGCATGACAAAGAGAAAATCACTCTCAAAAAAGGCTGAATGGATTA
ACTTATGTGGACAAAACAGAAGGAGGTCAACTAACAATAGAAGAAAATGA
CGTCATTAAGATTGAAGGATTTGTAGATCGTGTCTATCAAGATGCACCTG
ACGTAGTGGTGGTTCAATTGCATGACAAAGAGAAAATCACTCTCAAAAAA
AACAACCTTTGTGATTACGTTGTTTGGAATCCATGGCAACAGAATTGTTT
AAAGATGGCTGACATGGATGATGACGGTTATTTGAGCATGATTTGCGTGG
AAGCCGCGCATGCGTCGAAGAGAAGTATCGTTAAAGCAGGTTCCACTTGG
AACGCATCTCATGTTTTATCGAGTAGTCAGTAAAACAACCTTTGTGATTA
CGTTGTTTGGAATCCATGGCAACAGAATTGTTTAAAGATGGCTGACATGG
ATGATGACGGTTATTTGAGCATGATTTGCGTGGAAGCCGCGCATGCGTCG
AAGAGAAGTATCGTTAAAGCAGGTTCCACTTGGAACGCATCTCATGTTTT
ATCGAGTAGTCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141_pilon | genome | sc0000141_pilon:172523..178465 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 676-858:184 |
| Aaloc | 514-675:1366 |
| Aaloc | 310-510:4808 |
| Aaloc | 181-309:5283 |
| Aaloc | 1-177:5944 |
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