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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:259629..262633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039089 ID=XLOC_039089|Name=XLOC_039089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3005bp|location=Sequence derived from alignment at sc0000041_pilon:259629..262633- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAGCAATATAAAACCACAAAGTTTCGATACTTTTGGCATTTGATTGC
AAGAAGGATAGCCAATAAAAGAACAATGGATAGGCGATCTCTTTCATTCG
ATCATTCTTGCTCGGAAGGAGAAGAGGAAGATTGTTTCCAAGACGAAGAT
CCAAAAGCGAGATTTGAAAGGTTGGTCTAATTTATTTCCTAACCTCCCTG
GTACACAACGTTGTTGAACGTGCATCAAACGATATGGATGAAAGATAAGA
CCATGTTGTGTGTCAGCGTGATGAAACTTCATGTCGGGTCCAGTTTCAGA
AAGCGTTATAGTAATGGGCCATTCCATTAAATTTCCATACCGGGGTTGGC
AAACCTTTTCAAGTAAAAAAAAAATTTGAAAATGTGTGGATACCCCCTGG
AAAATGGAAATATTTGTAAAAAGACCCTTGGAAAATTTCTTTTCATACCT
TAAAGTGATGGTGGACGAATTGAAATCAGTCTATTATAACCCCCTAGAAT
TTTCGATATATTTTTATTACCCCCTTGAAAAATGAAAAAGAAACACTCTT
TAAGACCCCCTGGAAATTCTGCTCGAATTACCCCTGGAAATGTTCGTCCA
CCCCCCTATGGAATGGAATGTCAACACTTTATTTAGTGGTACTTCTCCAG
ACACTTTATATTTACCACTTCCTCGATTTGATAATCTATTTCTTGAGCAA
TAAGGTGCTATTTTCCCCTGTGATACCTAAATGTAACTTATTTTAGATTT
TAAGATCTAATGGATATCCGTCTTATAGTGAAGTAAATGAAGACGTCTCA
AAATTATGTATAATTCTCACAAATTTCAAGATTATGTCCTAAAATTGCTA
TGTAAAATCCGTTTTCCGTCCTAGACCAAAAACTACTGACCACTGTTGAT
AGTTCCTAAAAAGAAATTCCTTTGTGACTAACTTGATTACCTCTCTCTGT
AGTTTCCTGTATATTTTAGTATAAAACTAACATCCCAAATAAGACTGCTT
TTTCATTTTTGAGATAGCATTATAAAATTATTATTTGACAGTAAAACAAA
ATTCGGTACAGTTTTGCATCCAAGAGATCTTAAGATATTTGAAGCATAGT
CATTAGCTGACACGGAGTTTTATTGTGTTAGTTTGATTCGGGGCCAAGTC
TGCTAAATACCCCCAAATTAACCAATCACATTCATTATATTCTCCCTTTT
TTTGAGTGCAAACCTCACTGTAAATAAACTAATCGCTAACGCGTGCCATC
TTTTCAGATATTTGAAATCATTCCAATCAAGCAAGATGATGGAAGATGGT
TACAATACGTTTCAAATCCAAAAAGAAGTTCGGAATATGAAGTTAGATTT
TGAGGACCAGATGAGACTGAAAACCGATCAGATCATGAAGATGGGAGACA
TCTTGAATAAAATACGGAACGAAAATGAAGAGACCAACTCAACTTTGAAG
AAACAGTTGAAAATGAAAGACGAGAGGCTAATCAAAGTGGAAGAAAGGTA
ATGTCTAGTCTATGGAACCTCAATATGGAATCTCTTGCACTTTAAAACCG
CAAGTGCTTTAAAGTACGGTTAGAAAGTAGAGTTTTAACACTCTGAGTTT
TAACATCAGACTTTCGACTTTCGACCTTAGGATATCAGGATCTAAAAGCT
CAAAAATGTTCCAAAATAGCTGAGAACATAGCCTGGAAGCCACTTAACCC
CTCCCAAAGCGAAAATCCCCTGAAACAAAGTAGAAGTACTGAAATTGCGA
TTCTCACGCGAGCTTTGAATTCTGAAAAATACACAAAATTGCCAATATAT
TTCGGCACTGGTTGTAGCTTATAGCGTTGTTCTAACGTTCATTAAACGTT
ATGGTCCCAAGAACGTAGCGTGAACTATCTGGGAACATTCCGAGTAATCG
GTATAGTGATTAAATGTTTAACTCGGGTTGAGATGAAAACTTTCTTCGAA
ATCCCGATGAGGATAGAAATTCTATTGTTCCAAACACGAAAAATCCAGTG
GAGATGAATGAATTTGAATGAACTTCCCAGTGAGGGTATTTCTCCCACAG
GGGAAGAAGTTTTGGCCAAGTTTTCCTGAAGGGCTGGTGTCCCACCGGGT
CTGTGACACTGAGGTGTATCTTGACTTTATCATATCCTTTTCTTAGGCTC
AGACTGAATGAAGAAGTTTTGGTCAAAATGAGAAGAGACGCAGAAATCAA
AGAAATCAGAATTACAGAACAACTAAAAACCAAAGATGAAAAACTGGCAA
AGTTGGAACGAAAATTGAAAGACACCAAGGAGAATCTCAATAAGTTTAAA
GCAGAGAATGAAGCTGTTTTGCACCGTTTGGAAAAATCAGTCGATGAAAA
AAACACTCGGTTTAGTATACAAATGGAGGCAAAGGATGAAAAGATTGTCA
AAATTGAAGCAAAATTGGAAAAAAATGAAAGAAGAACAAAGGAAAACGAA
GAAGATTTGCTTCAATTGAGGGATGAATGTGGAATCAAAGACCAGCAATT
AGCTGTGCTTGACAGAGGTTTGACAATGAGTAAAAAGATGGCTCAAAGTC
TGTTAACCACACCTCAATGTCCATTCACGTGGGAAATTACCGATTTTGTC
AGCAAGTTTGATGATGCTAGAGAATTCAATAATCGAATCCATTCACCCTC
GTTCTTCTGTTTGGAAGGTTATAAAGGAATGCTGAAAGTGTATTTGAATG
GGAATGGAAACTATACTGGAACACACATTACCGCAACTTTCGACCTCGTT
CCAGGCCCTTTTGATGACATGCTTACCTGGCCAATGAGCTATGACCGTTT
CTCTTTCAAATTTTGCATCAATGGTGCTGATATCGCATCACAGACTATCA
AAAGGTCTGCAGGTGAGGGCCGTTGGAAGGACGATTACACACGGCCCGAA
GATGAGCAGAAAGGAAGTGGCGGTTGGGGGACAACTATCAGCCACCGCAA
ATTGCCGAAAATCTTTGAAGACGATACTATCACTTTCATATTTGAGATTG
AGTAA Coding sequence (CDS) from alignment at sc0000041_pilon:259629..262633- >XLOC_039089 ID=XLOC_039089|Name=XLOC_039089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000041_pilon:259629..262633- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAGCAATATAAAACCACAAAGTTTCGATACTTTTGGCATTTGATTGC
AAGAAGGATAGCCAATAAAAGAACAATGGATAGGCGATCTCTTTCATTCG
ATCATTCTTGCTCGGAAGGAGAAGAGGAAGATTGTTTCCAAGACGAAGAT
CCAAAAGCGAGATTTGAAAGAAAAAGCAATATAAAACCACAAAGTTTCGA
TACTTTTGGCATTTGATTGCAAGAAGGATAGCCAATAAAAGAACAATGGA
TAGGCGATCTCTTTCATTCGATCATTCTTGCTCGGAAGGAGAAGAGGAAG
ATTGTTTCCAAGACGAAGATCCAAAAGCGAGATTTGAAAGATATTTGAAA
TCATTCCAATCAAGCAAGATGATGGAAGATGGTTACAATACGTTTCAAAT
CCAAAAAGAAGTTCGGAATATGAAGTTAGATTTTGAGGACCAGATGAGAC
TGAAAACCGATCAGATCATGAAGATGGGAGACATCTTGAATAAAATACGG
AACGAAAATGAAGAGACCAACTCAACTTTGAAGAAACAGTTGAAAATGAA
AGACGAGAGGCTAATCAAAGTGGAAGAAAGATATTTGAAATCATTCCAAT
CAAGCAAGATGATGGAAGATGGTTACAATACGTTTCAAATCCAAAAAGAA
GTTCGGAATATGAAGTTAGATTTTGAGGACCAGATGAGACTGAAAACCGA
TCAGATCATGAAGATGGGAGACATCTTGAATAAAATACGGAACGAAAATG
AAGAGACCAACTCAACTTTGAAGAAACAGTTGAAAATGAAAGACGAGAGG
CTAATCAAAGTGGAAGAAAGGCTCAGACTGAATGAAGAAGTTTTGGTCAA
AATGAGAAGAGACGCAGAAATCAAAGAAATCAGAATTACAGAACAACTAA
AAACCAAAGATGAAAAACTGGCAAAGTTGGAACGAAAATTGAAAGACACC
AAGGAGAATCTCAATAAGTTTAAAGCAGAGAATGAAGCTGTTTTGCACCG
TTTGGAAAAATCAGTCGATGAAAAAAACACTCGGTTTAGTATACAAATGG
AGGCAAAGGATGAAAAGATTGTCAAAATTGAAGCAAAATTGGAAAAAAAT
GAAAGAAGAACAAAGGAAAACGAAGAAGATTTGCTTCAATTGAGGGATGA
ATGTGGAATCAAAGACCAGCAATTAGCTGTGCTTGACAGAGGTTTGACAA
TGAGTAAAAAGATGGCTCAAAGTCTGTTAACCACACCTCAATGTCCATTC
ACGTGGGAAATTACCGATTTTGTCAGCAAGTTTGATGATGCTAGAGAATT
CAATAATCGAATCCATTCACCCTCGTTCTTCTGTTTGGAAGGTTATAAAG
GAATGCTGAAAGTGTATTTGAATGGGAATGGAAACTATACTGGAACACAC
ATTACCGCAACTTTCGACCTCGTTCCAGGCCCTTTTGATGACATGCTTAC
CTGGCCAATGAGCTATGACCGTTTCTCTTTCAAATTTTGCATCAATGGTG
CTGATATCGCATCACAGACTATCAAAAGGTCTGCAGGTGAGGGCCGTTGG
AAGGACGATTACACACGGCCCGAAGATGAGCAGAAAGGAAGTGGCGGTTG
GGGGACAACTATCAGCCACCGCAAATTGCCGAAAATCTTTGAAGACGATA
CTATCACTTTCATATTTGAGATTGAGTAAGCTCAGACTGAATGAAGAAGT
TTTGGTCAAAATGAGAAGAGACGCAGAAATCAAAGAAATCAGAATTACAG
AACAACTAAAAACCAAAGATGAAAAACTGGCAAAGTTGGAACGAAAATTG
AAAGACACCAAGGAGAATCTCAATAAGTTTAAAGCAGAGAATGAAGCTGT
TTTGCACCGTTTGGAAAAATCAGTCGATGAAAAAAACACTCGGTTTAGTA
TACAAATGGAGGCAAAGGATGAAAAGATTGTCAAAATTGAAGCAAAATTG
GAAAAAAATGAAAGAAGAACAAAGGAAAACGAAGAAGATTTGCTTCAATT
GAGGGATGAATGTGGAATCAAAGACCAGCAATTAGCTGTGCTTGACAGAG
GTTTGACAATGAGTAAAAAGATGGCTCAAAGTCTGTTAACCACACCTCAA
TGTCCATTCACGTGGGAAATTACCGATTTTGTCAGCAAGTTTGATGATGC
TAGAGAATTCAATAATCGAATCCATTCACCCTCGTTCTTCTGTTTGGAAG
GTTATAAAGGAATGCTGAAAGTGTATTTGAATGGGAATGGAAACTATACT
GGAACACACATTACCGCAACTTTCGACCTCGTTCCAGGCCCTTTTGATGA
CATGCTTACCTGGCCAATGAGCTATGACCGTTTCTCTTTCAAATTTTGCA
TCAATGGTGCTGATATCGCATCACAGACTATCAAAAGGTCTGCAGGTGAG
GGCCGTTGGAAGGACGATTACACACGGCCCGAAGATGAGCAGAAAGGAAG
TGGCGGTTGGGGGACAACTATCAGCCACCGCAAATTGCCGAAAATCTTTG
AAGACGATACTATCACTTTCATATTTGAGATTGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:259629..262633 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 412-1269:859 |
| Aaloc | 172-408:1748 |
| Aaloc | 1-168:3006 |
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