XLOC_033549 (mRNA) -

Overview
NameXLOC_033549
Unique NameXLOC_033549
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000022_pilon:1697737..1706315-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033549 ID=XLOC_033549|Name=XLOC_033549|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8579bp|location=Sequence derived from alignment at sc0000022_pilon:1697737..1706315- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGTCCTTACACTGAAATTCATTTTGCTGTTGTTGGTGGAGTTCGG ACATTCGTTTGACGGTAAGTTAACTACGTCATCGGCCCTTTTTACACCGG CAACTTAACTACAATATCGGCCCTTTTTACACCGGCATTAATTGCGCTAA AGGTCAAATTTTTCCATCCCGATCCCTTACGCCGTCCCATATTACGCCAG CGACAAGAATTTAACGCCAACAAGGAGTAGTGTAAAAAGGGAAGATTAGG TATTATTATTTTGTGGAATTTTGGAGGTATTTGATTTGATCGGATAATAT TTTTTTGAAATTTTTGTTTTCTTCTAAAGGTAATCAAGGAACTTGGATGG ACAAATTTTCTTCCAAATAATTGTTTACCTAGTCATTTGGCAAATGCAAG ATTAGCAAAGAGATAACTTGTCATTTCTTTTTAAGAACAAAATATCTCTC TGGGATTTAAAGATACAGATTTTCCTGGTACCATATGATAGCTAAACTTT CCCATTCCCAGCCAAACATTCCTGGTGCATTTTAGCCTGGAGATCCATGC TATGATTTCTTATTCTATATACTGATGGCGAAATATATAGCATGGTATGG GCTGAGAGTTTGAATTTCCCAGATCCTAATAACAGTCGAAAACATAGAGA ATCAAATTTTGTTGTTCTTTTACTGGTTACACTTTCTTAGAGAAAGCGCA ACTTCCGAAATTTGTTTTTTATTTTAGTAAGTAAGGACAGCGCTAAATTC GAATTTCCCACTGTAATTTTTTTGAGGCAAATCTGTGCCTCACAGGTCAT ACCCGTCCTGTATACATCAGATTATAAAGATACAGGACGGGTCTCCTGTC TAGGCTCATTTCGGCATCTTTCCGCTGTTTTTCTTCTGATTATAACGGCA AAAAAACTTTTTTGACTATACGTGCAAATGTATGGACAACATGCAAAGGC CTAAAGATAAAGCTACTTTTGTCGTTACATGTTAAAGTTGCAAAAGTAAA GGAATGAGAAAGTTTACATCCTACGGTAGAGATAGTAATAAAATCTGTAT CCTTTACACTTTAGGAAACGCCAATTATGAAGGCTGTTACATTGTGTACA ATCAAGGTCGATTCAATGTCTCCTTTCAACTTCCAGCCAATGAAACAGTT CAAAATGATAACCATACAAGCTTTCAAGAAGACTACAAAAACCTCTACGA CATCCAACTGTTTTACTCAAACAACTCAAACAGATATGATTTCACGCCCG GGCGTTTTTGTCAAGTTACATTCATAACGCCCCAAAACGGATCGGTTCAA TGCCACTTGTTCCCATTGGAAGGGCGTGATATGTATCATATTAAATTGGT TGTCCAACGGCTGAGTGATGGGAAGATATTGATTGATCAATATATAAAAT CATATTTTAATACGTACCTAGACGGATTCAACTGTTCAATTGGTAAGTTT ACACGTTTTGTTTTTATTAATATATGAACAAACGATGTAAAAACAAGTTA AGAACATTTTGAGGCTTTGTAAAACACCCGATTTCTTAGAAAAGACAATT AACAAAAATATTCACCAAATGGTGGCATAAGAACATGTTAAGGGAACATT TTTAGACTTAAAACTCAAAAAGTTAACAATATCCATCCGAAGGCTTTAAA AAATGTTCCTATAAAAACACGTGTATTCTTTAAAACACTTACCGACTGGC ACAGTACGCCCAATCATTATTTGATATTCTGATGGCGGATTGGCGGCCGC CTTCGTTGAAGATCTAGAGTGACGGGTCAATTTCTCATCGGTGAGAATTG AATAATAGTCGGTCTTCGGTTTTCCGCATCCCCAGTCGGGTTCAACGGCC CTTTGCGCGTTAACCTAAAAATATTTCAGTAATCCCAGAAAACAAAGGGT TAGGTTCAGACCTCCCTTGGCAAATCCCTCGACGTGCTCTGGCGAAATTA GGTAATCCAAACCCTCCAGCTGTTGAAAACCCTCCTTGATCTTTAGAACG TTAGAGTGCACTGCATGGCTGGTGAGCGAATTTACTGCAAGTCTCTAGAA AATTACTCTTCAGCCAATTGGAAATACTCTACAAGGACGCAACTAGTACA CAATAGTAGGGGGAAATTTGTAAAATAGTGTGACTTTTTTAGTCAAAGCA CTTGTTATACATTTTTTGGAAAGCTAAGGGGTAGGCAATCAAAATAACAT GGGTGCCAATTTTTTTTCGGATACTTTGATGTGTTGTTCGGACAAATATG ACGGTCTTAGGCAAAAATCATAGGGTCAAAATTTAATGAAAATTTTAGCT TGAGAAAAGAGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAATTA AGATTAGAGATATATTGCGAGTATTTGTGATTTCTGTACCTCATTCAAGA TTCTGACCCTGAAAATAGTGTTTTCAGCCAGAAACAGCTGTTTTGTCAGG GGGGGGGGGGGCACGCAGTTACTACAAGACAGTATGACACTTACTACCGT GGTGGTACTGTATTCAGAAGTTATGAAAGCAGTTACTACATAGTGTAGTA ACTGCTGTTTGGGGGTGGTGCCAAACACTAAAACTAGCACTTTTGGTGTA GTAAGTGCTTATATTTCAATTCTTTTTAAAGAACTTTCAAAATTTTTACA AAAAATGATTTTTTTTGTGAAAAAATTATTTGTTAAAAAAAATATTTTTG TTATAAATGGACGAAAAAAAATCTGAAATTTTTCTCAGACCCAACTTTGA AATTATGCTTTCCCTAATTTCATTAAAATGTTCTCAAAAGCTGTTAACCA AGTAAATCAAAAGAAAATCTAGCACAAAAATGGCTTTAGGTTGAAAAATA ATCGCAATTTAGGGTAATTTCGAGCATGTTTTTGATGATATCACTCAAAA ACAGGGGTGGTACCTGGAAATCTTTTCTGAAAACAGTTACTACCAAGGTG TAGTAACTGCAAAGGGTGGTGGTCCTGAAAAAAATTGTTGAAAAAGCACT TACTACACATCATGTCTTGTAGTAACTGCGTGCCCCCCCCCTGGTTTTGT CCACTTTTTGCACTCTTTGAAGCTCCCCTAACCCTTAACTTTCCAAAAAA TGTATAACAAGTGCTTTGACTAAAAAAGTCACACAATTTTACAAATTTCC CCCTACTATTGTGTACTAGTTGCGTCCTTGTAGAGTACTTCCAATTAGTT GAAGAGTAATTTTCTAGAGACTTGTAGTAAATTCGCTCTTCATCCACGTA GTGATTCAATCATTAGACCTGTAGAGGAAAGCGCGTGTCTTATCATCCTT GAATCTATCTCTTAATTTTGACTGTTGATTACATAGCAGCGATAATCAGT AAGATCGAAGCTTGACCAGCTTGGGATCAAACACTAAACGTTATCTAAAA AGGCCTTTTTACACTGTGTCACTGTCGTTAGTTGAGATGCTTCTTGAATA CACCTAAATTTTGAATAAAAGTTAACTCTCAATACCTTCCCATTAAACTT CTTTGTAATACTTTGCAACTGAGCAGCAATGAAAAGAAAAGTATGAAAGA CATTTTGAAACGCTATTTTCACTATTGGATTCTAAAGGATTCTTGTGTTT TTCACTTTAGATCATGGGCCAACCTATGTTAAACTTTTGGAGACTTATGA TAATTTGATCAAATTAGAATGGCAATATCCTTTGTACGAACTTCAGTACC TTTCATCCACGCATAATGTCTCAATACGTGACAAACAAAATGTGACAGTT TTGGAGGTAAGAGCCAATCCTACTCAGAGCTTTTTTATGAAAACTCTACA ATTTGTATATACTCCAGAAAAAAAACCTTTGAAATGGTGGTCACAATATC TTCTTCTATCTTAGCAAAGTCACCTTAAAATGTGTCCATCACCCCAACAA GAAAGGTTTCCCGGGCTCTTCATTTTTTATAAGGCTGGATGTGACCACTT CTCCCAAAACTCGCTGAAATTGATCATGATTATATCCTTGAATTTTTTTA ATATTTAAGGTTTTATTTTTACATAAGTATTTCCGTTTCATATCAGACAC ATATATCATATCAGGACAGTGTCTTGCTATTGTTATATTATGCTGATATA AGCAAAAAAGTGTTTTCCTTTTCCTCTTTCTGACCAATCTTGCTCCACAT CCGTGTCGATGCAATGTGAAAAAGCTAAAATTGATGAGTAAGCGAACGAT ATAACTCTTAATTAAAAACAAAACCTTTAAGATATAGAAGGAAAGCGAAA TCTTGGTTGTTCTTCTGGTTTGAAAAATCTCGTTAAACAAGTGAAACGTA GATAATCTCTTATTTATAAAATATTTGAATAAAATCTCTCAAAAAAATGA AAATGTTGAAAATATTTTGAAATTTATCATAGTTTTTACAAAAGATTTTA ATAAATTTTGTCTATTGTCAAAGTTAATTTTTTTTTGTGAGGGCTTGTTG TGAGCTACGTGATTTCGACTTCAAATTAATAAATTTTTCTTTTTCCTTTC GAAATAATCAGACGACGTTTTAATGACTTTTAGCAACGTGCACTGCAGAT GGATTTCTAGCTAAATAGGTCTAAAACTGAATTAAAGAAAAAAACCCCGA CAGGGCAGTTTGAAATGAGACTTGAGTTGACTAACCTTTTCCTGACATCA GTCAATCGAATAAGCGTAGCTAGGAGATTGTTATTGTGACAAATTATTTT TGGATTTTTGATGAGGAGAAGTCACTAACACTAAGTTTTCCCTTGGGGGA AATTTGTATTAGGTGGTTTTTAATATTCGAAGGATGTCTCTTGAGTTTCA CGAGCTCCTTGCGTTTCTACCATCGAGTTTGAAAGTTCGAAGGGCTAGTG GGAAATCTTAAACCTTTTTCATGCGAGAAAAAGTGAAGCCTTAAGATTTG CACCGCTTTTGGAATGACTGATTGAACCGAGCGCTTTCTTTTATTTTCAC ACGGCATATATTCTCCAAAAAAGTTATAAGTTTTATTTTCAATCTACCAT TTGTGTGAAAACCACGTGTTTCAGATGGGAAATAAGCGGCTTCGTTTACC ATTCAAGGGTTTCAACTGTAGCACCTTCGAGGCTTTAAACAATGGCCCCC GTCACCGGGGGGGGGCCAGGGGGCCATGGCCCCCCCAATATTTTGCAAAG TATTTTTTTTTTTACTTTGAAAAATATTATATATACCGTTTAGAGGGGTG AAATAAGGGCAAAAAGTCGAAAATTTTCTTCGTCGCCCAACCATGGTGGG CGACATATTTTTTCGGCCCCCTCAATTCGATGCGCACGCCGGGGGCCATG TAAACTCCATGGATTCTACTATAATTACTCTAATCAGCAACCCGAATTTT ATTTCTTCTGAATTTCAAATAAGATTAAAGGTTTTATTTTTACATAAGTG TTCCCATCTCATATCAGACACATACTTCATATCAGGACAGTGTCTGTGTC TACCTATTGTTATATTATGCTTATATAAGCAAAAAAAATGTTTTTCTTTT CCTCTTTCTGACCAATCTTGCTCCATAGTCGTGTCAATCCAATGTGAAAA AGCTTTAGTAAGTAAATGTTATCACTGTTATTTAAAAAAAACTTTTAAAT TAGATTTAGTTTTGCATCTACTTTTCCAGAAACCATGTCGATGTAGAAGT TTAGAATGTGAGTGTACCATATCTGGTGACAACTTGATCGAACCTTGTCA AACATACACTTTATGTCTATCTACGGTGTACAAGTTTCATAAAGAGATGG AAAATTGTCAACCTTTTTACGCTAATCACAACAAGGTGAGGTGTAATCTT AAACTGTTCATAAAACAAAATGGGCTATTCCAGAAAAAATTGTACCCCTA TGTTGAGGAGATTCTTTTATGAAAAGGATCCCCTGGATTTTTTTTTTAAT TTTCAGGACCCCCTTGGATTTCTTTTCTCACTTTTCGAACCACCCTGGTT TTTCAACCTCATTTACTGACCACCCTGGTTTTTCAACCTCATTTACTGAC CACCCTGATCGTCACATCTCCTCAACATGGGAGGGGCCAACTATTTCTGG AACAGCCCAATTTATGATCAAACCTGTGCGGGCAACACAAAAATCAGAAC AAAAAGTAGCACTATTTTTTACCCATTTTTCTTCTTTTTTTCTTACCGAA TAATAAACTTTAAAATCTTAAACAGGCCTTTAGGGATAACCACTTAGCTT TGTGATAGAAATGCCCTTACTATAGCAATCTTACGCAACACAATCATTAA CCTTCGACAACCACAACACTTAAGCATGGCCTAGGAAAAACCTATTGTAC ACAGAAGTAAAGAAAAACGCATTGAAATAACTTAGAATACTGTCAAATGT AGCATTAGTGTGCTACATACACTAAACACCTTATTTTGAGAATATAAATA AAAGACGAATAACCTAAACCTAGTGTGTTTCTTGTATTGCAGGCGAAGAA AATTGTCAACAAATTTCTCCAGAAGAAGGTGAACCCCTTTTCCCTGGTTT TCTATAAAGTTTTTCAACGACATTCCCAATAAGTCACATTCCTTAGAAAA TATTAAGAATCGAAAAAGGTCATTTAATTGTTATAGCTTGAGGTATTTAA CGCTATTTGACCCTTTTAAACTCTAGTCTAAACATTCAAGAACTTCAGGT CATGGCATCGTAGGGGATCTGGCCAGTTTTGGGGGACGCTTTGATGTTTT TCATCCAAATTTCGGATAAACATTAACTTAAAACTTCTAAGCGTGGCGAT CGGCTAAAGCAAAACAATCACGCAAATGTAACGCCAATTACAAACATAAA CTATAGAACTCTTCGCTTTCACAGTTTGTTTTGAATGTTTTAGCTGAGCA ACTAGACAAGATCATCACAGTTGCAACATCCCCTTTAGAGCAGGTTTTGA CCAAAACTTAGTCTTTACCATTTTAGAATTTTTCTAATGAAACATTTATC AACTTTCTTTAGACCAATGGAAGACACTGTCAATTGTTGGGATTGCCACA CCCATTTCTGTTGCAATTGCTATTATTGTTTTTGTCAAAATCTATCTACG GTAAGCTACCTGAACCTGATATGGCTAGAAATAAGGAATTTCGTGACCTT TTAAGGCCTTTTTTAAGTTGTAAAGCTCTTTTTAATGTCAAAAATTCGTA CGTGGTGTCCAAATTATTTTCGATATAGACTTTGAAGTTCTCTTCCGTTT TTTGTGACCTCACTCTTCGGTATCTTTCACCTTTTAAACCTTTGTAAGCC AAATTAATGAGAAATATGTAAATGATTTCTTTTAAATGACCATTTTTTGG CATGGAAATTACCTATGCATGCGTCTATGCATGAATTATTTTGGCTACTA TTTTTATATAACTGATTCCTATTCTTTTTGTTCTCTCGCCAGACGTTGCA AGTCATCAAGTGTCGAAAGCGAGGACCCCGAGGTATTTATTTTTCTAAAT CTATTCAAAGTCTTTCCTCAATCTCAAAGCAATGTTCTTTTGTTTTCATT TTTCTGTTCCACCATAGCCGTACCTAGAATGATATGATAACATCTGAATT TCTGGGCCCAGACTCAAAGATATCTAAAGGGCTACTTAGACTACACAATA TATTGACGAGCAATATTTGACAATATCGTTTTCGGACCGTAACGAAGTAA ATAACAAGTGCTCTATTATAAAAAGCAAGCAATATATCATCAATATTGTG TAGTGTTGTAACCCTTAACATCAAAACTTTGTTGTGAAGGAAAATATGAG AGAAATTCCAAAAACTACTATCTACCAAGAATAAACTGGCATAATTGTCG TTCTTATAGAGTCAACTAACTGAAAATACAATGCGGTGAACATTCCAGCC ACGGCTTTCTTACGCTATGGTTCCACTCCAAATCTACCGTTTCCATTTGT TGATGATAAGTTGTTAAAAAAGGAATAGGAATCTTATCTTTAGGAACTTC AGTGAAGGGATTTTTTTCAGATATTCAGCCCCTTCACAATCATTTCTCTT AGAAACAGTACTTTTTACACTTTAACTAATCAAGCATTTGACCGGGGAAA ATGAATGCGATAATTCATTCACGTGAAAGTCAGGGTATTCGAAAATCAGC TCGGCTCAAATTCTGTTTTACGTTAACGGCTGTAATTTGCGTTAATAGCT TAAGCAGTTATATAAGTGTCACAAGGTGATTATTCTCCTCATTTAAGAGC CATGTCTAAAAGTCATTTTGTATTCTTTTGTTTTGAAAATCCGAACCTTA AGCCGTTTTTTATTTGCTCTAAACAAAATTGAGCCTAGCTATCTAAGATT AAAATAAGCCTTTTTCATACAGTCTTACCGTGCAATAAACCATTTCAGAA ATTTAAAATTGTGAGTCTTTTGTACTTTTGTGTTATTGAGAGTCGACAGT TTTTAAGAAATCTAAAATGTTTTTCGATATCCCTTTCTTTTTTGCAGATT TTCCCAGTGGTGCAAGAAGGGGAAGAAAGCACCTTACGTCCAAGAAATCC GGAAGGTTTAGAACCGATCTATGAAACTATACCGGACATAAGTGTCCGAA ACTACGATACTTTAAATGGTATGACGTGA

Coding sequence (CDS) from alignment at sc0000022_pilon:1697737..1706315-

>XLOC_033549 ID=XLOC_033549|Name=XLOC_033549|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2082bp|location=Sequence derived from alignment at sc0000022_pilon:1697737..1706315- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGTCCTTACACTGAAATTCATTTTGCTGTTGTTGGTGGAGTTCGG
ACATTCGTTTGACGATGTGGGTCCTTACACTGAAATTCATTTTGCTGTTG
TTGGTGGAGTTCGGACATTCGTTTGACGGAAACGCCAATTATGAAGGCTG
TTACATTGTGTACAATCAAGGTCGATTCAATGTCTCCTTTCAACTTCCAG
CCAATGAAACAGTTCAAAATGATAACCATACAAGCTTTCAAGAAGACTAC
AAAAACCTCTACGACATCCAACTGTTTTACTCAAACAACTCAAACAGATA
TGATTTCACGCCCGGGCGTTTTTGTCAAGTTACATTCATAACGCCCCAAA
ACGGATCGGTTCAATGCCACTTGTTCCCATTGGAAGGGCGTGATATGTAT
CATATTAAATTGGTTGTCCAACGGCTGAGTGATGGGAAGATATTGATTGA
TCAATATATAAAATCATATTTTAATACGTACCTAGACGGATTCAACTGTT
CAATTGGAAACGCCAATTATGAAGGCTGTTACATTGTGTACAATCAAGGT
CGATTCAATGTCTCCTTTCAACTTCCAGCCAATGAAACAGTTCAAAATGA
TAACCATACAAGCTTTCAAGAAGACTACAAAAACCTCTACGACATCCAAC
TGTTTTACTCAAACAACTCAAACAGATATGATTTCACGCCCGGGCGTTTT
TGTCAAGTTACATTCATAACGCCCCAAAACGGATCGGTTCAATGCCACTT
GTTCCCATTGGAAGGGCGTGATATGTATCATATTAAATTGGTTGTCCAAC
GGCTGAGTGATGGGAAGATATTGATTGATCAATATATAAAATCATATTTT
AATACGTACCTAGACGGATTCAACTGTTCAATTGATCATGGGCCAACCTA
TGTTAAACTTTTGGAGACTTATGATAATTTGATCAAATTAGAATGGCAAT
ATCCTTTGTACGAACTTCAGTACCTTTCATCCACGCATAATGTCTCAATA
CGTGACAAACAAAATGTGACAGTTTTGGAGATCATGGGCCAACCTATGTT
AAACTTTTGGAGACTTATGATAATTTGATCAAATTAGAATGGCAATATCC
TTTGTACGAACTTCAGTACCTTTCATCCACGCATAATGTCTCAATACGTG
ACAAACAAAATGTGACAGTTTTGGAGAAACCATGTCGATGTAGAAGTTTA
GAATGTGAGTGTACCATATCTGGTGACAACTTGATCGAACCTTGTCAAAC
ATACACTTTATGTCTATCTACGGTGTACAAGTTTCATAAAGAGATGGAAA
ATTGTCAACCTTTTTACGCTAATCACAACAAGGAAACCATGTCGATGTAG
AAGTTTAGAATGTGAGTGTACCATATCTGGTGACAACTTGATCGAACCTT
GTCAAACATACACTTTATGTCTATCTACGGTGTACAAGTTTCATAAAGAG
ATGGAAAATTGTCAACCTTTTTACGCTAATCACAACAAGGGCGAAGAAAA
TTGTCAACAAATTTCTCCAGAAGAAGGCGAAGAAAATTGTCAACAAATTT
CTCCAGAAGAAGACCAATGGAAGACACTGTCAATTGTTGGGATTGCCACA
CCCATTTCTGTTGCAATTGCTATTATTGTTTTTGTCAAAATCTATCTACG
ACCAATGGAAGACACTGTCAATTGTTGGGATTGCCACACCCATTTCTGTT
GCAATTGCTATTATTGTTTTTGTCAAAATCTATCTACGACGTTGCAAGTC
ATCAAGTGTCGAAAGCGAGGACCCCGAGACGTTGCAAGTCATCAAGTGTC
GAAAGCGAGGACCCCGAGATTTTCCCAGTGGTGCAAGAAGGGGAAGAAAG
CACCTTACGTCCAAGAAATCCGGAAGGTTTAGAACCGATCTATGAAACTA
TACCGGACATAAGTGTCCGAAACTACGATACTTTAAATGGTATGACGTGA
ATTTTCCCAGTGGTGCAAGAAGGGGAAGAAAGCACCTTACGTCCAAGAAA
TCCGGAAGGTTTAGAACCGATCTATGAAACTATACCGGACATAAGTGTCC
GAAACTACGATACTTTAAATGGTATGACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_033549XLOC_033549-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000022_pilongenomesc0000022_pilon:1697737..1706315 -
Properties
Property NameValue
Aaloc910-1041:133
Aaloc871-909:1187
Aaloc784-867:1616
Aaloc748-780:2136
Aaloc589-744:2951
Aaloc445-588:4968
Aaloc67-441:7514
Aaloc1-63:8580