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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:16499..19605- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033031 ID=XLOC_033031|Name=XLOC_033031|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3107bp|location=Sequence derived from alignment at sc0000049_pilon:16499..19605- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAGAAAAGCAGACAAACGAAAAAGGCGATCCGATGATGAATCTTC
ATCAGGAGCAAGCACTTCAAAAAATGCTAAAAATACCAAGAAAGGTAAGA
AAGTGATTGAAAAATGACCTTATTACAGTGTTCAAACTTCTATCGTCTCA
GAAGGATTTCTTTCTTGGTGAAGGAAATAAAGAGGTATTTCCCTCTCAAA
ATTGTGTATAATTCATCAAAATTTCAAGATTATGTGCTAAATTGCTATGT
AAGATCTGTTTTCTGTCTCACACCAAAAACCTCGGTTGATCACTGTCATT
ACCACTAATTGTTTAACCCATTTATCCTGGGGTTACTTTTGCGGCTTACA
ATCACCAATGGATTTGATTACATTTTCAAGGATTTCATAAGGGAAAGTAA
CTCCACTCTTTAAAATTTCACTCGCATTTTTATTTATGATTTGGAGTATT
GACAGTGGAGGCTAGTATAAAAATGGAATATAATGTAACAATTATGAGAA
AAAGCCTACTAAAAACACATGAACATTAAGTAGCATTGTATTATAATTTT
GTGGTTTTTTTATGTTAAGTTCTTTATGTTGAACAAAAAATAACTGGTAT
TGGTAATAAAATCACTGTTTTAAATTACTGTCTCCTTTCGATTCATCTTG
AAACGTTTTTGACATTATCAAGTTTTATACTCTTTTAAAATATCTTAAAA
TATTGAAAAGACTTACAACTCTTGGATTATGATTATTCCCATTTACTTTT
CACAATCATCTGCCATTGCTTTAAATTAGTTTTCTTTATATTTGAATTAT
ACTGAATTATACTTAGAAAAAAAGTAAAACTGTGATATACCGCTCTGTAA
ATTACAGTATTGAGTACTGTTGAATTTTTTTTAAAGTCAGTTGTACAATT
ATATTTGAATTATTTGATACTTCTTACTTCTCGCAGAAGAGACTCCAGCC
ATAGAAGAGGTGACAATCATCCCTGCGGTGTTCACCAAATCTGGCAAAGT
ATTAGCTTTTGGACAAGGAGATGTTGGACAGCTTGGTCTCGGTGATGAGG
TTTTGGAGAGGAAACGACCAGCTTTGGTTAAAGAAGTGGATGAATTCAAA
TTTATACAATCAGTATGCGGTGGAATGCATACTGTTATCTTGACTGAGGA
TGGAGAGGTTTGTGTTTTGTAGTAACTTGTTCAAGTCCTTAACGTGATCC
TTTCTTATTTGTCTAATACATTCAATAATGGACACCCCTTAAAAACTAGG
GGGTTCGACTTTTTGGGAAATTTTTTTTTGCAAAAAGGATGGTTTGACTT
TTGGGTAACGTTTAAAAAAATATTTTTCCGTTTGTCAACCTTTTTTGATT
GATACATTTTTTTAAAGCAGCAGAAAACTCTATAGTTTGATTGATTTTTA
GATATTGAGGCAGTATGGGAGTTAAGCATATAGGAGTTAAGCATATGAGG
GGATATTTTTGAGGGGCAGTTGAAACCCCTGTACCCACTATAAATTCGTA
TCTTTAACCCATCATGTATCTTGGGAGAGGGTCTCGAGGCTTTGGTGTAT
ATTTTGGCGTTTATGACGTTTTGACATAGAAAAAATGATCTCTTTTTAGT
TGTGCCCTTTCTGATAGCGATGGATTTATATACAAAACTTAGTACATTCA
ATTCTATTATAGGTCTACACTTTTGGGTGTAATGATGAAGGGGCACTGGG
ACGAGCCACCAGCGGTACAGATGATGAAGAATATTATGCAAGAAAAGTTG
CTCTCCCCGACGGTGTCAAAATTATACAAGTTTCTGCTGGTGACAGTCAT
ACTGCTGCCTTGTCAGATAAAGGAGAAGTTTATGCTTGGGGAGCATACAG
GGTAAGAATTTTTTTTTAGACCTAGCTGGAGCTCTTATAAATTAACCTGT
GCTCGTCCGTTTTCTCAGGATTGGCCTGAGACTAAGATACAAAATGGTAT
ATAATGCCCAAAATGTGACTGTCCCGGAAATATTGTCAATTATTCAATTT
TTACAATCAGGTAGGCCCATACAAGTATCACTTGTTTTTGCACAGTTTTG
TGTATTTTTCCTTAGGTTAATTTAGGAAGTATAACTAATTCGTTAAAGTG
TTTATTCATATCTTTAGTTTCAATTGAAAATTCCTACATATAGTATGCTG
TGACCCCTGCTTCGTTATATTGAGGCCTTTTTTATTGTGGGGCCTTTTAA
AAAACATTATCATCTTTAATTTTTCTTTCTCTAGGATGCCAGTGGTCAAA
TGGGTCTAACAGCAGCTTCTCTTGGCAAGAAGAACGAGATTAGAAAGATA
TACCCAAAAGGTGATGAAATAGAGGACCCAGCGATCAAAGTAGCTTCTGG
TAACGATCATACTGTCATTCTAACAAAAGATGGTTCGATATACACGAATG
GAACCGGTGAACAAGGCCAATTGGGTAGATTAAAGGAATGTTTTGGACAT
CGTGGTGGTCGACGTGGTTTAGATTTTCTTTTATCGCCACAATTGGTTCG
TTTTCGACGGAAAGTGAGATTCTCAGACATTTTCACTGGCAGCTTTTGCA
CTTTCGCCCTAAGTAGCGACACAAACGATGTCTACGCTTGGGGTCTGAAT
AATTATGGACAGTTAGGCTCTGGCACAAATGATAATTATTTCAACCCGAA
AGTTATAAAGCCTTTAACGGAAATACGGAACCAATCGAAGTCCAATCAGA
TGGTGATCCAAGGTGGTCAACACCATTCCATAATGGTGGATGGAGAAGGT
ATTGTTTATAGTTTTGGTCGCGCAGAATATGGTAGACTAGGACTTGGAAC
AGATGCAAAGGAAACTGCGGTACCTGTCAAAGTTCCAAAACTAGCAGATA
AAAAAGTCAAAGATGTTGCGTGTGGGGAATCAGTTAGTTATGCTGTAACC
GAGAAAGGCCAATTATATTCATGGGGTTTTGGAACCACACTGCAGTTAGG
TGTTGGCGATGATGATGATATTTACGAGCCAGAGCTGGTCAAATCGAAAA
ATCTTGATCCTGAAACCGATGAAGTTTTAACCATATCTGGTGGTGGCCAG
CACGTTTCCTTAGTTGTTTGTAAAAAAGAAAACATGGCAAATGGACATGA
AAGTTAA Coding sequence (CDS) from alignment at sc0000049_pilon:16499..19605- >XLOC_033031 ID=XLOC_033031|Name=XLOC_033031|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2754bp|location=Sequence derived from alignment at sc0000049_pilon:16499..19605- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAGAAAAGCAGACAAACGAAAAAGGCGATCCGATGATGAATCTTC
ATCAGGAGCAAGCACTTCAAAAAATGCTAAAAATACCAAGAAAGATGCCA
AGAAAAGCAGACAAACGAAAAAGGCGATCCGATGATGAATCTTCATCAGG
AGCAAGCACTTCAAAAAATGCTAAAAATACCAAGAAAGAAGAGACTCCAG
CCATAGAAGAGGTGACAATCATCCCTGCGGTGTTCACCAAATCTGGCAAA
GTATTAGCTTTTGGACAAGGAGATGTTGGACAGCTTGGTCTCGGTGATGA
GGTTTTGGAGAGGAAACGACCAGCTTTGGTTAAAGAAGTGGATGAATTCA
AATTTATACAATCAGTATGCGGTGGAATGCATACTGTTATCTTGACTGAG
GATGGAGAGAAGAGACTCCAGCCATAGAAGAGGTGACAATCATCCCTGCG
GTGTTCACCAAATCTGGCAAAGTATTAGCTTTTGGACAAGGAGATGTTGG
ACAGCTTGGTCTCGGTGATGAGGTTTTGGAGAGGAAACGACCAGCTTTGG
TTAAAGAAGTGGATGAATTCAAATTTATACAATCAGTATGCGGTGGAATG
CATACTGTTATCTTGACTGAGGATGGAGAGGTCTACACTTTTGGGTGTAA
TGATGAAGGGGCACTGGGACGAGCCACCAGCGGTACAGATGATGAAGAAT
ATTATGCAAGAAAAGTTGCTCTCCCCGACGGTGTCAAAATTATACAAGTT
TCTGCTGGTGACAGTCATACTGCTGCCTTGTCAGATAAAGGAGAAGTTTA
TGCTTGGGGAGCATACAGGGTCTACACTTTTGGGTGTAATGATGAAGGGG
CACTGGGACGAGCCACCAGCGGTACAGATGATGAAGAATATTATGCAAGA
AAAGTTGCTCTCCCCGACGGTGTCAAAATTATACAAGTTTCTGCTGGTGA
CAGTCATACTGCTGCCTTGTCAGATAAAGGAGAAGTTTATGCTTGGGGAG
CATACAGGGATGCCAGTGGTCAAATGGGTCTAACAGCAGCTTCTCTTGGC
AAGAAGAACGAGATTAGAAAGATATACCCAAAAGGTGATGAAATAGAGGA
CCCAGCGATCAAAGTAGCTTCTGGTAACGATCATACTGTCATTCTAACAA
AAGATGGTTCGATATACACGAATGGAACCGGTGAACAAGGCCAATTGGGT
AGATTAAAGGAATGTTTTGGACATCGTGGTGGTCGACGTGGTTTAGATTT
TCTTTTATCGCCACAATTGGTTCGTTTTCGACGGAAAGTGAGATTCTCAG
ACATTTTCACTGGCAGCTTTTGCACTTTCGCCCTAAGTAGCGACACAAAC
GATGTCTACGCTTGGGGTCTGAATAATTATGGACAGTTAGGCTCTGGCAC
AAATGATAATTATTTCAACCCGAAAGTTATAAAGCCTTTAACGGAAATAC
GGAACCAATCGAAGTCCAATCAGATGGTGATCCAAGGTGGTCAACACCAT
TCCATAATGGTGGATGGAGAAGGTATTGTTTATAGTTTTGGTCGCGCAGA
ATATGGTAGACTAGGACTTGGAACAGATGCAAAGGAAACTGCGGTACCTG
TCAAAGTTCCAAAACTAGCAGATAAAAAAGTCAAAGATGTTGCGTGTGGG
GAATCAGTTAGTTATGCTGTAACCGAGAAAGGCCAATTATATTCATGGGG
TTTTGGAACCACACTGCAGTTAGGTGTTGGCGATGATGATGATATTTACG
AGCCAGAGCTGGTCAAATCGAAAAATCTTGATCCTGAAACCGATGAAGTT
TTAACCATATCTGGTGGTGGCCAGCACGTTTCCTTAGTTGTTTGTAAAAA
AGAAAACATGGCAAATGGACATGAAAGTTAAGATGCCAGTGGTCAAATGG
GTCTAACAGCAGCTTCTCTTGGCAAGAAGAACGAGATTAGAAAGATATAC
CCAAAAGGTGATGAAATAGAGGACCCAGCGATCAAAGTAGCTTCTGGTAA
CGATCATACTGTCATTCTAACAAAAGATGGTTCGATATACACGAATGGAA
CCGGTGAACAAGGCCAATTGGGTAGATTAAAGGAATGTTTTGGACATCGT
GGTGGTCGACGTGGTTTAGATTTTCTTTTATCGCCACAATTGGTTCGTTT
TCGACGGAAAGTGAGATTCTCAGACATTTTCACTGGCAGCTTTTGCACTT
TCGCCCTAAGTAGCGACACAAACGATGTCTACGCTTGGGGTCTGAATAAT
TATGGACAGTTAGGCTCTGGCACAAATGATAATTATTTCAACCCGAAAGT
TATAAAGCCTTTAACGGAAATACGGAACCAATCGAAGTCCAATCAGATGG
TGATCCAAGGTGGTCAACACCATTCCATAATGGTGGATGGAGAAGGTATT
GTTTATAGTTTTGGTCGCGCAGAATATGGTAGACTAGGACTTGGAACAGA
TGCAAAGGAAACTGCGGTACCTGTCAAAGTTCCAAAACTAGCAGATAAAA
AAGTCAAAGATGTTGCGTGTGGGGAATCAGTTAGTTATGCTGTAACCGAG
AAAGGCCAATTATATTCATGGGGTTTTGGAACCACACTGCAGTTAGGTGT
TGGCGATGATGATGATATTTACGAGCCAGAGCTGGTCAAATCGAAAAATC
TTGATCCTGAAACCGATGAAGTTTTAACCATATCTGGTGGTGGCCAGCAC
GTTTCCTTAGTTGTTTGTAAAAAAGAAAACATGGCAAATGGACATGAAAG
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:16499..19605 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 505-1377:874 |
| Aaloc | 316-504:1446 |
| Aaloc | 97-315:2170 |
| Aaloc | 1-93:3108 |
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