XLOC_030432 (mRNA) -

Overview
NameXLOC_030432
Unique NameXLOC_030432
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000043_pilon:1664022..1664867+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030432 ID=XLOC_030432|Name=XLOC_030432|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=846bp|location=Sequence derived from alignment at sc0000043_pilon:1664022..1664867+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACAAATAAGTTGCATCTCATACATAGCTATGAGATATTTTCTGACTTT CCATCCGACAGGCACatacaaaatacatcttttccTCAAATCACTCTTTT TCTTCATCACGTTTGGCATTCCTATACTCATTGAATATAAAGATGACTCC AATATAGAATTAAACTACATGGCCATAGGAATAATTATACTAACAGTTTT ATCCTTTCTTTTGATGATTCTTATCGGATCAAGAAATCGACCGTACGGGA ATAAACTTCAACACCATACTGTGTGGTTCTCTTTAGTGGCAACCACAACG AACACTTTACTCTGTGATTTAGACTTTGACATCGATTTTTACCAAGACTA TTATGAAAACAGTGTTTGGTCGCCAGAAATAATTGATATTCCACTACCAT CAACAATGTTGCTTTTCCCAATGGTCAGCTTGATAATCACCATCCTCGTt gataaaaatttgagaaaatcatATTTCGAATTCATGGACAATTTATCCAA CAAATGTCTTCAAATGTTAAAACGTTGTCAACCAAAAAACAACGAGAATG AACCGTTGCTAGGTAACCAAGGTGTCCGAAATTTGGATGACGAAGCTCGG ACATGCGCACACCAAGATCCATTTGAAGATCATGCTTGTTATGGTGCACA TGGTGTTAGAGAAGATGATGTTCGATCGATGCCGCATCAAGCACCCGAAC TTGATGTTGGTTGCGCCGCTCATTCGGCTCCTTTTGATGACCAAGCCGCT TTTGACGTCACTAAAGGTGCTCATGGACCACACGCTCAAATTCTCGGAAA ACGATCGACcgcaaatgaaaatgaaatagttAATGTGGAAAAATGA

Coding sequence (CDS) from alignment at sc0000043_pilon:1664022..1664867+

>XLOC_030432 ID=XLOC_030432|Name=XLOC_030432|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000043_pilon:1664022..1664867+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACAAATAAGTTGCATCTCATACATAGCTATGAGATATTTTCTGACTTT
CCATCCGACAGGCACatacaaaatacatcttttccTCAAATCACTCTTTT
TCTTCATCACGTTTGGCATTCCTATACTCATTGAATATAAAGATGACTCC
AATATAGAATTAAACTACATGGCCATAGGAATAATTATACTAACAGTTTT
ATCCTTTCTTTTGATGATTCTTATCGGATCAAGAAATCGACCGTACGGGA
ATAAACTTCAACACCATACTGTGTGGTTCTCTTTAGTGGCAACCACAACG
AACACTTTACTCTGTGATTTAGACTTTGACATCGATTTTTACCAAGACTA
TTATGAAAACAGTGTTTGGTCGCCAGAAATAATTGATATTCCACTACCAT
CAACAATGTTGCTTTTCCCAATGGTCAGCTTGATAATCACCATCCTCGTt
gataaaaatttgagaaaatcatATTTCGAATTCATGGACAATTTATCCAA
CAAATGTCTTCAAATGTTAAAACGTTGTCAACCAAAAAACAACGAGAATG
AACCGTTGCTAGGTAACCAAGGTGTCCGAAATTTGGATGACGAAGCTCGG
ACATGCGCACACCAAGATCCATTTGAAGATCATGCTTGTTATGGTGCACA
TGGTGTTAGAGAAGATGATGTTCGATCGATGCCGCATCAAGCACCCGAAC
TTGATGTTGGTTGCGCCGCTCATTCGGCTCCTTTTGATGACCAAGCCGCT
TTTGACGTCACTAAAGGTGCTCATGGACCACACGCTCAAATTCTCGGAAA
ACGATCGACcgcaaatgaaaatgaaatagttAATGTGGAAAAATGACAAC
AAATAAGTTGCATCTCATACATAGCTATGAGATATTTTCTGACTTTCCAT
CCGACAGGCACatacaaaatacatcttttccTCAAATCACTCTTTTTCTT
CATCACGTTTGGCATTCCTATACTCATTGAATATAAAGATGACTCCAATA
TAGAATTAAACTACATGGCCATAGGAATAATTATACTAACAGTTTTATCC
TTTCTTTTGATGATTCTTATCGGATCAAGAAATCGACCGTACGGGAATAA
ACTTCAACACCATACTGTGTGGTTCTCTTTAGTGGCAACCACAACGAACA
CTTTACTCTGTGATTTAGACTTTGACATCGATTTTTACCAAGACTATTAT
GAAAACAGTGTTTGGTCGCCAGAAATAATTGATATTCCACTACCATCAAC
AATGTTGCTTTTCCCAATGGTCAGCTTGATAATCACCATCCTCGTtgata
aaaatttgagaaaatcatATTTCGAATTCATGGACAATTTATCCAACAAA
TGTCTTCAAATGTTAAAACGTTGTCAACCAAAAAACAACGAGAATGAACC
GTTGCTAGGTAACCAAGGTGTCCGAAATTTGGATGACGAAGCTCGGACAT
GCGCACACCAAGATCCATTTGAAGATCATGCTTGTTATGGTGCACATGGT
GTTAGAGAAGATGATGTTCGATCGATGCCGCATCAAGCACCCGAACTTGA
TGTTGGTTGCGCCGCTCATTCGGCTCCTTTTGATGACCAAGCCGCTTTTG
ACGTCACTAAAGGTGCTCATGGACCACACGCTCAAATTCTCGGAAAACGA
TCGACcgcaaatgaaaatgaaatagttAATGTGGAAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_030432XLOC_030432-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000043_pilongenomesc0000043_pilon:1664022..1664867 +
Properties
Property NameValue
Aaloc376-840:382
Aaloc145-375:142
Aaloc1-141:1