|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1591742..1596819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030416 ID=XLOC_030416|Name=XLOC_030416|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5078bp|location=Sequence derived from alignment at sc0000043_pilon:1591742..1596819- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATGCACACATTGCAGAACATCTTTTTGAATTCGACGTCAAGTCCGA
CAATCCATCAACAGCAGAACACAGAGGACGTCACAGAAGGGCTGCTATAT
ACGACGAAGAATATGAATGGGAACAAAACTCCAATGGAATGGTTTATATT
CCGTATCTCATTGGAAGTGACGTTGGTAAGAATTGAATTCTAATATAATG
GCTTCTTCTGATTCCATAGTCCTTAGCCAAAGCAACAAATTCTTAAACCA
AACTCTTTTCAAATTGGGGATATCCAAGTTTTAAGCTTTGAACATTTTAA
CAAGTTTTGCTTACATATACTAAATCTTTTGAGGGCATTTTGACACGCCT
TCTTCTTGTCTTCTCAGGACAAATTTTCTCTTTTCGGAACCATTTTAAAC
AATGCTACTTTATGAATTGAGCAAACATTAAAGACAAATATTGGATGCAA
AAATGATTGAATTTGAAAAATTTTCTTCAAATGAAGATTTTTAAATTTTT
ATTTTAAAAATTACGAAAAATTCTGAAGAAGATTCAAGAAATGATGAAAA
TCGCTAATTTTAGTAGCAATGTACTAAATTTCTCAAATTTTTGACTGCAT
GCCACCTTTTTGGTATTTCAGTATCCCATGGTACTAAACATATAGTATTT
AGCACAAAAAGAAAGGAAATCTTCTCAAAAGTATATGTGCTTCTCCTTGC
TGCATTGTCACTTTTTGATGATAATAAGAAAGATAGGCCCTCCTGTCGCT
CCTGTTTCTAACTTCCGTCTAGTAAGGCTCCACAGAATTTTGTTCTCGCT
TCTCTCTCATATATTGCCTGTCTCCTAATAGTGGATAGGTAATATGCCAT
AAGAATCCCTGTTTTAATGTATAATATGTTTCTTTCAATGCATAAATCCA
GCATTTATAAGCTTTGTTTTCCTATCGTATCAGCGCCAATAGTACGAGGT
GTAATGGCAGCAGCTATCCAAGACTTCAACCAGTACACATGCATTCGTTT
TGTACCCCGACAAAGTGAAAGTGATTTTGTTTACATCTTTACCTCTGGGT
TTGGGTACGTATCATTTGTTTCTTAATCTACTTGATACCAGTGCCGTAGG
AAGCATTTTCATATTGGGGGGGCTGAAGTTTAGTGACACCGCGAGGGCCA
ACCATGGTTTGGGCCGAGGGGGGAAATTTTGAAAATTTGAGCTCTAGATT
GCTTAAAAATACACTCAAAACATGCACATAAAGACAATTATGATAAATTA
AAAAAGAAAAACTTTGCATTTTGCAAAATAACCATTTTTGAAAAAATTAT
TGGGGGGCATAGCCCCCCCCCCTTGCCCCCCAGTTGCTACGGCACTGCTT
GATACAATCTTTTGTTATCAAATAAAAGTAATACCGCCTTAAGTTGGCGA
GAGGCTATACCAATAAAATTCAAAAGTGAAAATGAAGAATTTTGAGATTT
CCATGATATGATTATGTCAGGTTCTGTATTGAGAACCAACTGTCTTATGT
GCTATACTACCTTCCTGAGACACATCAAGTGCGTTTATCCGGCATGAACC
ACTAGGGAACAAGGTCAGGGTACTCACCTCGTGGAATCGACACCTAGCAC
ATTCACTCACCAAGTGAATCGCAGCACCGAGTGAGAGTCGAACCTCCGCC
TCCTGGACGGCAGTCAAGACTACACTACTTCACTACTATATTTCATTTCT
TATTTCAGTTGTTATGCCAACGTTGGTAAGCAGAAAGGATTGACACAAGT
TTCTTTGGACGAAATATGTGGACAGAAAGGTATTGCACTTCACGAATTGA
TGCATGTCCTGGGTTTCAGACATGAACAAGGTAGAAGAGATCGCGGACGA
TATATCACTATACATTATGATCGTATTAAGCCAGGTAAGTCGTTTATTCT
GTTTGATATTTGTTGTCCAGTATCAATAATATACTGCTTCTCTTTGATGT
TTCTCCTTCTAATAATTTCTTCCATTTGAAAGTTAAAACTGAGTTTATAT
ATGTGTGTTTTTCTGCGACGGAGACGGTAAGGTTCTTATTTGACTAGATT
CTGACCAGCTGAAGACGACGGTAAATCAACACTTTTGCCGTCCCGAATCG
CTTAAGTCACTTTACCGTCCTCAAAAACGTAAATACATAACTTGCTAAAA
CATTGCTGTGGGAGGTATTACATATATGTTGAGAGGCTGTTACAACATAT
CTAGGCGTGTCCAATGAATCCGAAATGGACTAATCACATGTTCTTCAATG
TAGGAAGGGTTCTTTGTCCGCAAAGAGTTTACCAGCTGTTTCAGTTAGCA
TGACTTTCTTCTGCTCTTTAAGCTATCTTGCTCACTGTCTACATGCCATT
TGATCAATGGGCAATTTGTAGGTGTACCTCCCTTTCTTTTTCTTGAGGCA
CGTAAGCCGGTCCTGTAGCTCGTATCGATTGAGCTTTGCTTAGCTCGTCT
TTGCCATCAGTTTTGATGATAGATTCATGCCGTTGTTACGGAAGCAGTTT
TGTTTAAGGTATTACAAAGTTTCAAAGGAATTACAAAGATTGAGAGGCGC
TGCAAAGCGTGAGAGACGTTACAAATTTTGAAAGGTACACCAAAGTTTTA
GAATCTTACAAAACTGGAATAGTTTTACAAAGGTTGAAAGTATTACAAAA
TTTCAGAAAAATTACAAAGATTGTGAGGTGTCATAAAGCTTTACAAACCG
TGAGAGGTATTACAAATTTTGAAAGATTTTATAAAAGAGATGTTACAATT
TTTGAGAGATAATAAAAAGTGAGCGGTATTACAAATTTTGAAAGGTATTA
CAAATTTTGAAAGATATTACAAATTTTGAAAGGTATTATAAATTTTGAAA
GGTAATTTAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAAAT
TTTGAAAGGTATTACAAATTTTGAAAGGTATTTCAAATTTTGAAAGGTAT
TACAAATTTTGAAAAGTATTACAAATTTTGAAAGGTATTACAAATTTTGA
AAGGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAA
ATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGT
ATTACAAATTTTGAAAGGTACTACAAATTTTGAAAGATATTACAAATTTT
GAAAGGTACTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTAC
AAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAA
GTATTACAAATTTGAAAGGTATTACAAATTTGAAAGGTATTACAAATTTT
GAAAGGTATTACAAATTTTGAAAGGTATTACAAATTTGAAAGGTATTACA
AATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGG
TATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAAATTT
TGAAAAGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTA
CAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAA
GGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATTACAAAT
TTTGAAAGGTATTACAAATTTTGAAAGTTATTACTAATTTTGAAAGTTAT
TACAAATTTTGAAAGGTATTACAATTTTGAAAGGTATTACAAATTTGAAA
GGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGTTATTACTAAT
TTTGAAAGTTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGTAT
TACAAATTTTGAAAGGTATTACAAATTTTGAAAGTATTATAGATTTTGAA
AGGTATTACAAATTTTGAAAGGTATTACAAATTTTGAAAGGTATCACAAA
GTATCAAAATAATAAAAATGTTTAATAGGTATTACAAAATGTGGCAGGTG
TATTATATGGTGTGTTATATAAAGTGCAAGAAGACGTAACAAAGTTTGCG
AGATATTACGAATTACGTAGTAGCCAGTAGATATGAATCTTCTTGTTGTC
GTGTTTGAAAACAATATGTTGATTTCCGGATTTTTATTTCTTTTTGTAAA
TATGATATTTGACGTCAAAATACATAATAACGCTGATTTTTTAAACACTC
CTATAAACCTTAAAACAGGTAGCGCTACACAGGCTTTACTTCTCATCCAA
ATGTTTTTTCTCTAGCCCCTTATGGTCATTTTTAAACTCGATGCAACAAC
AAGGTAGAAGTTTGATCGTCTTAATTTGGTGTAATACTATATTTAATAAA
ACTGTGTTAGGAATAATGACCGTTCAAGTGCCTACTTTCGATGAGATAAC
ATCTTAAGCTTTTCGAGCTAGGTTAAGCTAATAATGTGTAAACGTTTTTC
ATAGAATATCGGAATCAGTTCACTTTGGACGAATATGGAAAATATGTTGT
TTATGGTACTGAGTATGATGGACAAAGCTTAATGCATTACGGAAAGTGAG
TTTTACTCTCCTGGCGCTGGTTTTTTCCCCGGCCGGGGTGGTGCAACATT
TTTTAGCTAAATTAATAAAATTTTACAGACTGGAGCAATTTTTCCCCGAT
AAGATATATCCTTATAAATCATTCAATTGTGATTTCTTGGTGTTTGTGAT
TTCTTGGTGTTTGTGTTGATTAGAGTACCTTTTAAGATGGGAAAATATTA
GGCTGCTTGCATCCTCTAACGAATTCGTGCATCTTTTTATACTACCTGCG
ATTTTGTAGAGGTCTGCGATTCAGACTAGGAAAATATAAAATAGTCTTTT
CGATCGTTTTATCGGAGAGGTATGTCATCCTTATACTCAAGATGGATGAA
GATTGAAATCTTTTAAGAAGAAATTTTAAGCTGTTTTGAGGAATTTTACC
TTGTGAATATTTTCTCCATTCCAGCCGTGTTGGAGGACTTACACCAGACC
TGGTCACAATCAGTTCAAAGGTTGACCCTTCTCAAACGTTCGGTCAACGG
AACGGATTCTCAACGCTCGATTTACGGGAGATCAATTTGAAGTATAAATG
TGGAAAACAATATGTCAATTACGATTGA Coding sequence (CDS) from alignment at sc0000043_pilon:1591742..1596819- >XLOC_030416 ID=XLOC_030416|Name=XLOC_030416|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1434bp|location=Sequence derived from alignment at sc0000043_pilon:1591742..1596819- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATGCACACATTGCAGAACATCTTTTTGAATTCGACGTCAAGTCCGA
CAATCCATCAACAGCAGAACACAGAGGACGTCACAGAAGGGCTGCTATAT
ACGACGAAGAATATGAATGGGAACAAAACTCCAATGGAATGGTTTATATT
CCGTATCTCATTGGAAGTGACGTTGTTAGATGCACACATTGCAGAACATC
TTTTTGAATTCGACGTCAAGTCCGACAATCCATCAACAGCAGAACACAGA
GGACGTCACAGAAGGGCTGCTATATACGACGAAGAATATGAATGGGAACA
AAACTCCAATGGAATGGTTTATATTCCGTATCTCATTGGAAGTGACGTTG
CGCCAATAGTACGAGGTGTAATGGCAGCAGCTATCCAAGACTTCAACCAG
TACACATGCATTCGTTTTGTACCCCGACAAAGTGAAAGTGATTTTGTTTA
CATCTTTACCTCTGGGTTTGGCGCCAATAGTACGAGGTGTAATGGCAGCA
GCTATCCAAGACTTCAACCAGTACACATGCATTCGTTTTGTACCCCGACA
AAGTGAAAGTGATTTTGTTTACATCTTTACCTCTGGGTTTGGTTGTTATG
CCAACGTTGGTAAGCAGAAAGGATTGACACAAGTTTCTTTGGACGAAATA
TGTGGACAGAAAGGTATTGCACTTCACGAATTGATGCATGTCCTGGGTTT
CAGACATGAACAAGGTAGAAGAGATCGCGGACGATATATCACTATACATT
ATGATCGTATTAAGCCAGTTGTTATGCCAACGTTGGTAAGCAGAAAGGAT
TGACACAAGTTTCTTTGGACGAAATATGTGGACAGAAAGGTATTGCACTT
CACGAATTGATGCATGTCCTGGGTTTCAGACATGAACAAGGTAGAAGAGA
TCGCGGACGATATATCACTATACATTATGATCGTATTAAGCCAGAATATC
GGAATCAGTTCACTTTGGACGAATATGGAAAATATGTTGTTTATGGTACT
GAGTATGATGGACAAAGCTTAATGCATTACGGAAAAATATCGGAATCAGT
TCACTTTGGACGAATATGGAAAATATGTTGTTTATGGTACTGAGTATGAT
GGACAAAGCTTAATGCATTACGGAAACCGTGTTGGAGGACTTACACCAGA
CCTGGTCACAATCAGTTCAAAGGTTGACCCTTCTCAAACGTTCGGTCAAC
GGAACGGATTCTCAACGCTCGATTTACGGGAGATCAATTTGAAGTATAAA
TGTGGAAAACAATATGTCAATTACGATTGACCGTGTTGGAGGACTTACAC
CAGACCTGGTCACAATCAGTTCAAAGGTTGACCCTTCTCAAACGTTCGGT
CAACGGAACGGATTCTCAACGCTCGATTTACGGGAGATCAATTTGAAGTA
TAAATGTGGAAAACAATATGTCAATTACGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1591742..1596819 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-717:154 |
| Aaloc | 475-561:673 |
| Aaloc | 298-471:3370 |
| Aaloc | 178-294:4144 |
| Aaloc | 1-174:5079 |
|
