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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000329_pilon:165049..168250+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026678 ID=XLOC_026678|Name=XLOC_026678|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3202bp|location=Sequence derived from alignment at sc0000329_pilon:165049..168250+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCATTTTTGCTGGACTAGACGACAGTAGTGGTTCGAATATTGACTT
TTCTTTATCATTATCTTATCAAGGATTGAATGAAATACCCGAAGATGTGA
TCAAGAAACATTCAAAGCAAACAACGTCACTTGATCTTAGTTACAACATT
TTCAAGTAtagttatatatttttattaaatacACCTATCCCGTATttgta
aaactaatgcgcgcgcattattttgatgctctccaccgtttggtctctgg
aggtaaacaaacccgtttttgcctgcgttcccttagggaaagttggtttt
ttgagcttttcttataAGTTCTgctgtcgaacaaaattccctcaaatttt
agtatgttcaatctattcatgatattataccgacctgaaaatattttgcc
aaacaatcttatacacaacggtggagcacATTGGTgctaaatcttcatga
tgcaccGGCCTTGCAAGTACACCGCGCGGGCAAAATATTGTGCGCGTAAG
CGCACAGGCGAGCGCAGCGTTTTGTTAGGGATAGGCAGCAGGCTGGCGAA
GCCAGCCTGCTGCTCATCCCTAACATGCACCCAGACGGCTGTGCACCCTC
CCGGTGGTGCACCCGTGTGTGGGGTCTTCCTGGAGGAATGGTgatcataa
cagttagcctaactcgtgaGGTCTGTTCACCTGTATATACTATATATGTC
ACTCTATAAATAACcttgaatttcggaaaattaGCAGCCGTCGTGGCCCA
GTGGTATAGAGTACGTGTTTCGTAATCGGAAACATGTAGGTTCGAACCGG
GGTAAagtattgaaaagtttcaaaaaattttctaagtctCCGTGCTTGTC
ggtgcatcatgaagatttagccataggttaaaaaaaggtctatttaacgC
AATTGAACAAAATCGAATAATCGCAATTCAATtgtcgaatcgcaatcgaa
tattacctagGGATTTGCCGCTCGATTGCTTCGATTTcgtttgattgtat
tcgattacgtgattgatttagattttattcgctttcgtacgatactttag
cgctcggccgcccacgctaaaactCATCAAACGTTAGCGTAATAGAACGA
AATCGAATATTAAtcaaatgtaattgacaatcaatcgaaccaatggaaca
tagtcaactattaatcgaaccaatctaaccttactcgaacgcaatcgaac
acaatcaaatattacccaggaattgaccgttcgattgagattcgattacg
ttcgacaatcgaatcgcaattattcaatagcgttcgattacgttcgattg
gttcgattgcgatttttgctcgaagttgttcgattgacaccgtctggtga
TTTTAAAACTGTGCTGTAAAACTCATTATCCTTGTCACTTTGCACATTCA
TTCTTTGAAAGTTTTAGAAAGATGCTCCTTGAAAATTCCTTgcgttttct
tttttcaaaggaaattgaCAATCCAACATCAAATCAAATACCTTAGGATC
GTTTAATATTgacatgcgtcttctaatttcgacaccggatctgtaaaata
atcaaaacaaaccttgaatgaaattcttggtatcattcttatcgaacaag
ttcatccatcaaactagaagttcagtaaacattgcaatcctttcaataaa
aaaaacagccaaattataagcagtttcacacaacacacgaaacgcatgca
aacttcctcgtaactttctcgtgtccatcattaaaattttacaactttat
tacgcttcaagtcacgtgataaaaataattcgggCGCTTAGTCAACCTGG
TTTCCCCGTCCTTATTGTTTATTACAAGCACACGCTTGACCGCTTGACAC
ACTCTAGGCGcgtttctcatattatattaacaatctgtgacgtgataggg
agagtacaatttagtgattgattgataacttgggtatgtatttgtttatg
tttgattttttatttcgaagaccagcctacagctatgtcgaaattagaag
acgtatgtcgatattagacgatcctacggtagTAATTTAGGAGAACCACC
CGATGGtctattgaatgacaaattactCATATAAATACTTATTGTATTTG
TTTTAGTCTGGAAAATAAatattgacatttttgtgaaaacttgCAATTTT
GAGTCATTTAGTGATAACggtatgaaatttaaaaaaaaaaagtagagaAT
GGTCTTTTTGATTGTGTGAGTGTAAGGAAGAAACTAAAAAGCATTCAGTC
CATGTCTCGTGCCTGATTCATACAGGTATTATtacaaagtttaatttttt
caagGTGCTTGATATCGTTACGACAATTTGACCAGTTGCATACTGTTATT
TTGGATCATAATGCCTTGGATGAACATTTTTGCTTCCCTGGAAAATTCCC
TGCCATCAAACTCCTCTCAGTAAATGGAAACAAGATCGCGAATTTGAGTG
TCTTTGTAAACAGAATGTCGCAAGATTTACCTAATCTGACATTTCTAAGT
ATGATGAAAAATGACGCAGCTCCAAGCTACTTTAATGGAGgcacaaaatc
acaaaatgaaGATTACAGGTTAGATTTCATCATTCTTTGTTTACATAGTC
TTGTCCAAAACATTTACCCAATTGTTTACTGAAGTTCTCTCCATAAATTT
TGTCCAATTATTtgagatgagctggagtttttacaagatacttcactaat
tggtcatttgaagtgatagaaatgacgcgttctttagaaaaagtaataag
attcttttattactggttaacgaccaatcaaatcaaataagagcttgtaa
aaactccagcttgtcccaattaTTTACTTACCCCCTATCTTTATTTGACC
TCACCCCTAGAAGCTGAAACCCCCCATTTTGATTATAAATTAAGGAAGGG
AGTCAAAGGTTCACACTGTAGCATTTTCTGAAATCTTTTCCTCAAGAGTC
AACCcaaaaaaacttgttaaaataaAGTGTTAAATAATAAGCTTAGAATT
GCTTATCGTctcaaaaaagtataaaatagttattcaaagttttttttaaa
aatattttgttaggTCCTATGTCATCAGCCATTTCCCAAAACTAAGGAAC
TTAGATGGATGGCCCATCCTTGATGGAGAACGTGAACAAGCATATAGACT
ATATGGAAAGAGATGGAAGATCAAAAAGAGAACTGCAAGCAGTTACACAT
GA Coding sequence (CDS) from alignment at sc0000329_pilon:165049..168250+ >XLOC_026678 ID=XLOC_026678|Name=XLOC_026678|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000329_pilon:165049..168250+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCATTTTTGCTGGACTAGACGACAGTAGTGGTTCGAATATTGACTT
TTCTTTATCATTATCTTATCAAGGATTGAATGAAATACCCGAAGATGTGA
TCAAGAAACATTCAAAGCAAACAACGTCACTTGATCTTAGTTACAACATT
TTCAAATGTCCATTTTTGCTGGACTAGACGACAGTAGTGGTTCGAATATT
GACTTTTCTTTATCATTATCTTATCAAGGATTGAATGAAATACCCGAAGA
TGTGATCAAGAAACATTCAAAGCAAACAACGTCACTTGATCTTAGTTACA
ACATTTTCAAGTGCTTGATATCGTTACGACAATTTGACCAGTTGCATACT
GTTATTTTGGATCATAATGCCTTGGATGAACATTTTTGCTTCCCTGGAAA
ATTCCCTGCCATCAAACTCCTCTCAGTAAATGGAAACAAGATCGCGAATT
TGAGTGTCTTTGTAAACAGAATGTCGCAAGATTTACCTAATCTGACATTT
CTAAGTATGATGAAAAATGACGCAGCTCCAAGCTACTTTAATGGAGgcac
aaaatcacaaaatgaaGATTACAGGTGCTTGATATCGTTACGACAATTTG
ACCAGTTGCATACTGTTATTTTGGATCATAATGCCTTGGATGAACATTTT
TGCTTCCCTGGAAAATTCCCTGCCATCAAACTCCTCTCAGTAAATGGAAA
CAAGATCGCGAATTTGAGTGTCTTTGTAAACAGAATGTCGCAAGATTTAC
CTAATCTGACATTTCTAAGTATGATGAAAAATGACGCAGCTCCAAGCTAC
TTTAATGGAGgcacaaaatcacaaaatgaaGATTACAGgTCCTATGTCAT
CAGCCATTTCCCAAAACTAAGGAACTTAGATGGATGGCCCATCCTTGATG
GAGAACGTGAACAAGCATATAGACTATATGGAAAGAGATGGAAGATCAAA
AAGAGAACTGCAAGCAGTTACACATGAgTCCTATGTCATCAGCCATTTCC
CAAAACTAAGGAACTTAGATGGATGGCCCATCCTTGATGGAGAACGTGAA
CAAGCATATAGACTATATGGAAAGAGATGGAAGATCAAAAAGAGAACTGC
AAGCAGTTACACATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000329_pilon | genome | sc0000329_pilon:165049..168250 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 421-558:3065 |
| Aaloc | 157-417:2306 |
| Aaloc | 1-153:1 |
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