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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000048_pilon:402825..405328- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021964 ID=XLOC_021964|Name=XLOC_021964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2504bp|location=Sequence derived from alignment at sc0000048_pilon:402825..405328- (Clytia hemisphaerica_ch_hm2_pilon)
CAATACTTAATAAAGCATGTTGTTCTCGTTTTTGATCCACCTAAGAATCA
AGACGAGTCCAGATTGAATATGGAAGTTCCTGAATCTCAAAAAGAAGTTT
TTACAGATGATGTTGCAGATGATGTTACAGATGATGTTACAGATGATGTT
CCTAATGATGTTACAGATGATGTTCCTAAAACTTCAGCCAAAAATATTGC
CTTTGAGAGATTCAAAGGTCTGTTACGCAAGGAGTGTAACAAGAAAAATG
GAAATCCCAAGGCAATATGTCTATATCTAAACAAAACTTTTGAGGGGAGG
AGATATTTTTTAGAATCTCTAAAGGCTTCTACAAAGAAATCACCAGCCAA
CATCGTAGCTGAGTTCATCCAAGAATATCCAGCATTCAAATATCCTATTG
ATGTATGGTCTTTCCACGTACAACAAAATTTTCTTTATAATAATAGTGAA
TGTGGTGATGAACTAATTTCGTTTTAGAGTGTCTATATTTTTTGCCTAGT
GCTTTGAGCATTGTTATGTTATTTTTTGAACTAACCTCGATTTTGAAATA
GTATAGAGCCAGTTGTAAATTAAATAGTGTCCCCCTCCTCTAAAGAGTGG
TGTTTTGAAAAAATGCCAAAAGGATGAACAAAGGTCTTTTTGAAAATCAA
GGGGTAAAAATCAGATGCAATGGAAAATCTCTAGGTAGGGGAGGAATTTC
CAGAATTCTCAAGGGGGCAGCCAATCCAATGAGTTTTTAAAGCCCGAAGG
GCTAGATCCGCGGCCTTGTAAGAAAAGTGAAGCAAATATTTAGGATTTCC
TACCAAGGTCACGTGACTAGAATCACTGTGTGGAGGATTGCGCGAGCGTT
CTCAGAGAGAATCTCTGAGAAACCCAAAACGCTTCGTTCTTCGAAACAAT
TAAAATATATTTTTCAATCTATCATTCGGAGAAAATAGTTTTGGCGCCAA
AGTCGTGCTTCACTTTTTTTGCTGGAGAAAGCTTATAGTTGCACATCTAG
CCCTTCTGGCTTTATAAATCTGTGATCCAACCCCCTGGGACCCAATGAAA
TTCGCTTGAAATTTGCCTAATTCTTTTTCAGCACGTTTGTATTTCAGCAA
GTTAGGTAATTGGTGCAAGTTTTTCCGACATGAATTTTTGGGATTAAACT
TTAATTTTTTTAACTTTTTTTCCTTCGCAGATCGTGAATGAAGTCGGAAA
AATAAACAAAACGAAAGAATTTTTAACCGAGGATGGATACATGAATGTAT
GTACGCAGAGACTCCAACAACATTTGGACAACATCATTTACTTTGGGATG
AGCAAACGTGCTATCAAACCACCAAAGCAGTGTTCAAGTGGTATATTTTT
TTATTTTATTTTCTTTTTTATTTGAGACGAATTTTGGACCTCTGAGTTTA
CTTTGATACTCTCTCACAGATAGTAAAACACCCATTGGAGTCTTTCCTTA
AAATCCTTTGTTATTCCCATGTGGTTTTAACTTTTCTCGAAACCATTGTG
AAACGGATGCACACTTCTTTAGGGCTCTGACCTTAGTGCAAAATAGGCAA
CCCTAATTTTCGGGAAGCAAACCATTTTGTGAGTGGGGAACATCTTTTCT
AATGGAGGATTTTCAAGAGAGATGGAAACTCCTCTGCGCGTTATTGTATA
TGTGCAAATCGATGTTTTTTATTCTTATTTAGATGGTAAACTCCTTCACA
TGTTGACCTATCTCCCAACGATCTTCACAGTTTCGAAGAGAGTCGTCAAG
AAAAAGCTCATCATTGAAATTGAGGTAAGCATCAGCTTATGCTTTTCCTT
ACTGAAATTTTCAGAAAATTTTTGTTCTTGTGATTCTAGCTTGAGATTGT
CAATTTGTACCAAAGTGTCCAAAATTAAATCGTACCCTCTCTAGGTTCGA
CTCTATACATTAGCTTTTCAAAAATCAGGATTCTTACAGGTCCTGGTTGC
AGATTTTTTCTGTTTTGTAAAAGCGACCATGTTCTTTGTCTGCACAGACG
TGCTAGACGACTTTTTTTATATTAACATTTGGGTCAAAAAGGTCATAAAA
ATGGATGGTGGTTTCTCCGCCGAAAATGCGATTTCAAATGGCATGAATGA
GGCTATCCCAAACGATTTCGCGAGTTTTATTTTCGCGAAAATGGCGAAAA
TAAATCCGATTAAAGTAAAATGTTTTCAATCTCTTCCATTTGTAGAATCA
CGAAGACCCCGAAAAAGTAGTTGGTAAACTGCAGTCGAGTCATCCGATTT
TAGTAGTCGATAATAGTAAAGCTCATCTCCTCGTGCACAAGACAATTGTA
TTCACTGAAGAAAATATTTCAAGGGCGATTGTAGCGCTGGTTGTCACGTT
CTATATGCTGAACGTAGATTATCCTCAAGAATTGGAGCTGTGCTTGACCA
TTTTACAATTCTTGTTGTTCGAGGATTTTCAAGCGCCAGCCTCGATCTTA
AATCAAGCTAATGAACACTGGAAATGTTTCCAAGATTATATTCTTGATGC
TTAA Coding sequence (CDS) from alignment at sc0000048_pilon:402825..405328- >XLOC_021964 ID=XLOC_021964|Name=XLOC_021964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000048_pilon:402825..405328- (Clytia hemisphaerica_ch_hm2_pilon)
CAATACTTAATAAAGCATGTTGTTCTCGTTTTTGATCCACCTAAGAATCA
AGACGAGTCCAGATTGAATATGGAAGTTCCTGAATCTCAAAAAGAAGTTT
TTACAGATGATGTTGCAGATGATGTTACAGATGATGTTACAGATGATGTT
CCTAATGATGTTACAGATGATGTTCCTAAAACTTCAGCCAAAAATATTGC
CTTTGAGAGATTCAAAGGTCTGTTACGCAAGGAGTGTAACAAGAAAAATG
GAAATCCCAAGGCAATATGTCTATATCTAAACAAAACTTTTGAGGGGAGG
AGATATTTTTTAGAATCTCTAAAGGCTTCTACAAAGAAATCACCAGCCAA
CATCGTAGCTGAGTTCATCCAAGAATATCCAGCATTCAAATATCCTATTG
ATCAATACTTAATAAAGCATGTTGTTCTCGTTTTTGATCCACCTAAGAAT
CAAGACGAGTCCAGATTGAATATGGAAGTTCCTGAATCTCAAAAAGAAGT
TTTTACAGATGATGTTGCAGATGATGTTACAGATGATGTTACAGATGATG
TTCCTAATGATGTTACAGATGATGTTCCTAAAACTTCAGCCAAAAATATT
GCCTTTGAGAGATTCAAAGGTCTGTTACGCAAGGAGTGTAACAAGAAAAA
TGGAAATCCCAAGGCAATATGTCTATATCTAAACAAAACTTTTGAGGGGA
GGAGATATTTTTTAGAATCTCTAAAGGCTTCTACAAAGAAATCACCAGCC
AACATCGTAGCTGAGTTCATCCAAGAATATCCAGCATTCAAATATCCTAT
TGATATCGTGAATGAAGTCGGAAAAATAAACAAAACGAAAGAATTTTTAA
CCGAGGATGGATACATGAATGTATGTACGCAGAGACTCCAACAACATTTG
GACAACATCATTTACTTTGGGATGAGCAAACGTGCTATCAAACCACCAAA
GCAGTGTTCAAGTGATCGTGAATGAAGTCGGAAAAATAAACAAAACGAAA
GAATTTTTAACCGAGGATGGATACATGAATGTATGTACGCAGAGACTCCA
ACAACATTTGGACAACATCATTTACTTTGGGATGAGCAAACGTGCTATCA
AACCACCAAAGCAGTGTTCAAGTGATGGTAAACTCCTTCACATGTTGACC
TATCTCCCAACGATCTTCACAGTTTCGAAGAGAGTCGTCAAGAAAAAGCT
CATCATTGAAATTGAGATGGTAAACTCCTTCACATGTTGACCTATCTCCC
AACGATCTTCACAGTTTCGAAGAGAGTCGTCAAGAAAAAGCTCATCATTG
AAATTGAGAATCACGAAGACCCCGAAAAAGTAGTTGGTAAACTGCAGTCG
AGTCATCCGATTTTAGTAGTCGATAATAGTAAAGCTCATCTCCTCGTGCA
CAAGACAATTGTATTCACTGAAGAAAATATTTCAAGGGCGATTGTAGCGC
TGGTTGTCACGTTCTATATGCTGAACGTAGATTATCCTCAAGAATTGGAG
CTGTGCTTGACCATTTTACAATTCTTGTTGTTCGAGGATTTTCAAGCGCC
AGCCTCGATCTTAAATCAAGCTAATGAACACTGGAAATGTTTCCAAGATT
ATATTCTTGATGCTTAAAATCACGAAGACCCCGAAAAAGTAGTTGGTAAA
CTGCAGTCGAGTCATCCGATTTTAGTAGTCGATAATAGTAAAGCTCATCT
CCTCGTGCACAAGACAATTGTATTCACTGAAGAAAATATTTCAAGGGCGA
TTGTAGCGCTGGTTGTCACGTTCTATATGCTGAACGTAGATTATCCTCAA
GAATTGGAGCTGTGCTTGACCATTTTACAATTCTTGTTGTTCGAGGATTT
TCAAGCGCCAGCCTCGATCTTAAATCAAGCTAATGAACACTGGAAATGTT
TCCAAGATTATATTCTTGATGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000048_pilon | genome | sc0000048_pilon:402825..405328 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1561-1869:310 |
| Aaloc | 1471-1560:821 |
| Aaloc | 1309-1467:1325 |
| Aaloc | 907-1308:2505 |
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