|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000750_pilon:16716..19373- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020397 ID=XLOC_020397|Name=XLOC_020397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2658bp|location=Sequence derived from alignment at sc0000750_pilon:16716..19373- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACGCCTTGAAGTTGAAGACAGCGCTGAGAAATTCAGTATCAATCAC
TTCAAAGAGATGGTCAAGTGGCGCCATACCCTTTGATCCTACCATCATCC
TTGGAAATGTTGTACATCCTAAGAAATTTGTACCATTACAAAACATTGCA
GTCTACCAGCAACAGATTGATGGAGAAGAAGATGCTATGCACGATAACTT
ACGCGCAATAAGAAGCCTTCAGATGCTTGCTAAAGAGCTTGACTATAATG
AAGAAGATAAAGGCACGGAGTCGAAGTTAGGCAAGTCAATGAAAATGCTG
CACACAAACGTAGATTCGGCTGCTACAAATTATGCAGAGAAATTGCGAAC
AAATCTTCCCCTTATCAACAAGGAGAAGGCAAAGATTAGATTGATTGATG
ATCATGTTGAAAGCCCTTTGGATTTCAACAAGTCCCTGATCAAAACAGAT
TTACCAATCAGCTCAAACACCATCAAGTTGAATGCTCAATATTTTTCATT
CGACGATGAAAAGCAAGATAGCCAAACGACCATTATGAAAATGAAATCAT
TTGTTTCTGGAGAAGTGGATAGTATTTTTGACAGCAAAATCAGTGGAAAA
GTCTCAAATGCAGTCCATCAACAGACAGCTCAACAACGCGAGGAACATTC
AATCGTGGGAACTTTGGTCATCACAGCAACCTGTACTCATGCCAACGCGA
GTATTTTTTCTCCACTTGTTATCGATGCTGACAAAGCAGTAACGTCTTGG
AACGCGTGCTATACAGAAGATCTAATGGTTGATGATATTGATCAAATGAA
AGGATATGTCAGTGATAAAAAAACCTAAAACTGACACCCTCAAAGTTCTT
GAACCTGTTCAAGGCAAGGAAGAGACTGCGGAAGAAACAGATAAAAAAAT
AACACGACAATTGAAATTGGTTACAGGTGCAACTTATGGTTCGTGTTTTG
TTGGTATGGTTCATATGTTGAGAAGCACATCGACAACATCTAGCCAAGAA
ATGTTGGCAACAGCTGAATCATTAGAATCTCACTTTAAAATTGCTGCTTG
GTTTACTGACATGGAAGGAGGCTTTGGAATAAATTCATCATTTTCAAAAA
ATCTACTAGTACAAGCTCTACTGAGTCAGCAATCAATCTTATCCCATGTT
AGTTTGGTATGCGAGGGCCTTATCCCAACAATAACAAGTGAGAAGATCGC
AATTGGTGTGAAAGCCTTTAGTGAATTCGATCCTGCATCCACCATGAAAC
AATTGGCAACTTTGCACAATGAAACCCAGAATGCGAATCAAACCGTAAGC
AGTGCTGCTGATAATGCTCGTGAAGGAAAGAAAGTAACAGAGCTGCGTGC
AACTGACGTCAAAAGCACCATGGCTGCTCTTAGCGAGGTCGATGATGGAA
AGAATAGCGTTTTGACTGTCAACACAATCATGACAGCTATGGATGAATAC
ACAAAGGGAGCGAAAGAAGGAAAGATTGGTATTCCAATCAATTTCTTCTT
GAAGAGTCTTACCAAAGCAGATATCGCAAAAATGTGGTTATCCAAATATT
TCACTAAGGAAGAGCAAGAGAAGAAAGGAGAGCAAGGGAAGAAAGGAGAG
CAAGGGAAGAAAGAAGAGCAAGAGAAGAAAGGAGAGCAAGAGAAGAAAGG
AGAGCAAGAGAAGAAAGGTGAGCAAGAGAAGAAAGGAGAGCAAGAGAAGA
GAGGAGAGCAAGAAGACAAAAAGGAGAGCAAGAGAAGAAAGGAGAGCAAG
AGAAGAAAGGTGAGCAAGAGAAGAAAGGAGAGCAAGAGAAGAAAGGAGAG
CAAGAGAAGAAAGGAGAGCAAGAGAAGAAAGGTGAGCAAGAGAAGAAAGG
AGAGCAAGGAAGAAGAGAAGCAAAGAAGAAAGGAGAGCAGAGAAAAGAGC
AAGAGAAGAAAGAGAGCAAGAGAGAGAAAGGAGAGCAAGAGAAGAAAGGA
GAGCAAGAGAAGAAAAGGAGAGCAAGAGAAGAAATGAGACAAGAGAAAAG
AAAGGAGAAAGGAGAGAGCAAGAGAAGAAAGGTGAGCAATAGAGCAAGGA
GAGCAAAGAAGAAAGGTGAGCAAGAGAAGAAAGGAGCAAGAGAGAGAAAG
GAGAGCAAGAGAAGAAGGTGAGAGCAGAGAAGAAAGGTGAGAGCAAGAGA
AGAAAGGAGAGCAAGAGAAGAAAGGAGAGCAAGAGAAGAAAGGTGAGAAA
GAGAAGAAAGGAGAGCAAGAGAAGAAAGGAGAGCAAGAGAAGAAAGGTGA
GCAAGAGAAGAAAGGAGAGCAAGGGAAGAAAGGTGAGCAAGAGAAGAAAG
GAGAGCAAGAGAAGAAAGGAGAGCAAGAGAAGAAAGGAGAGCAAGAGAAG
AAAGGAGAGCAAGAGAAGAAAGGAGAGCAAAGAGAAAAAGAGAGGCAAGA
AAGAAAGGAGAGAGAAAGAAAGGGAGCAAGAGAAGAAAGGAGAGCAAGAG
AAGAAAGGAGAGCAAGAGAAGAAAGGAGAGCAAGAGAAGAAAGGTGAGCA
AGAGAAGAAAGGAGAGCAAGAGAAGAAAGATGACACACACACAAAGGGTG
AGTAGCCCAGGTAGTAGTAACCTCGGAAGTGGCGACCCAGGTAGAGACAA
CCCTGGAAGTGACAACCCAGGTAGTAGCAACCCTGGAAGCGGCAACGCAG
GTAGCAGT Coding sequence (CDS) from alignment at sc0000750_pilon:16716..19373- >XLOC_020397 ID=XLOC_020397|Name=XLOC_020397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3404bp|location=Sequence derived from alignment at sc0000750_pilon:16716..19373- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACGCCTTGAAGTTGAAGACAGCGCTGAGAAATTCAGTATCAATCAC
TTCAAAGAGATGGTCAAGTGGCGCCATACCCTTTGATCCTACCATCATCC
TTGGAAATGTTGTACATCCTAAGAAATTTGTACCATTACAAAACATTGCA
GTCTACCAGCAACAGATTGATGGAGAAGAAGATGCTATGCACGATAACTT
ACGCGCAATAAGAAGCCTTCAGATGCTTGCTAAAGAGCTTGACTATAATG
AAGAAGATAAAGGCACGGAGTCGAAGTTAGGCAAGTCAATGAAAATGCTG
CACACAAACGTAGATTCGGCTGCTACAAATTATGCAGAGAAATTGCGAAC
AAATCTTCCCCTTATCAACAAGGAGAAGGCAAAGATTAGATTGATTGATG
ATCATGTTGAAAGCCCTTTGGATTTCAACAAGTCCCTGATCAAAACAGAT
TTACCAATCAGCTCAAACACCATCAAGTTGAATGCTCAATATTTTTCATT
CGACGATGAAAAGCAAGATAGCCAAACGACCATTATGAAAATGAAATCAT
TTGTTTCTGGAGAAGTGGATAGTATTTTTGACAGCAAAATCAGTGGAAAA
GTCTCAAATGCAGTCCATCAACAGACAGCTCAACAACGCGAGGAACATTC
AATCGTGGGAACTTTGGTCATCACAGCAACCTGTACTCATGCCAACGCGA
GTATTTTTTCTCCACTTGTTATCGATGCTGACAAAGCAGTAACGTCTTGG
AACGCGTGCTATACAGAAGATCTAATGGTTGATGATATTGATCAAATGAA
AGGATATGTCAGTGATAAAAAAACCTAAAACTGACACCCTCAAAGTTCTT
GAACCTGTTCAAGGCAAGGAAGAGACTGCGGAAGAAACAGATAAAAAAAT
AACACGACAATTGAAATTGGTTACAGGTGCAACTTATGGTTCGTGTTTTG
TTGGTATGGTTCATATGTTGAGAAGCACATCGACAACATCTAGCCAAGAA
ATGTTGGCAACAGCTGAATCATTAGAATCTCACTTTAAAATTGCTGCTTG
GTTTACTGACATGGAAGGAGGCTTTGGAATAAATTCATCATTTTCAAAAA
ATCTACTAGTACAAGCTCTACTGAGTCAGCAATCAATCTTATCCCATGTT
AGTTTGGTATGCGAGGGCCTTATCCCAACAATAACAAGTGAGAAGATCGC
AATTGGTGTGAAAGCCTTTAGTGAATTCGATCCTGCATCCACCATGAAAC
AATTGGCAACTTTGCACAATGAAACCCAGAATGCGAATCAAACCGTAAGC
AGTGCTGCTGATAATGCTCGTGAAGGAAAGAAAGTAACAGAGCTGCGTGC
AACTGACGTCAAAAGCACCATGGCTGCTCTTAGCGAGGTCGATGATGGAA
AGAATAGCGTTTTGACTGTCAACACAATCATGACAGCTATGGATGAATAC
ACAAAGGGAGCGAAAGAAGGAAAGATTGGTATTCCAATCAATTTCTTCTT
GAAGAGTCTTACCAAAGCAGATATCGCAAAAATGTGGTTATCCAAATATT
TCACTAAGGAAGAGCAAGAGAAGAAAGGAGAGCAAGGGAAGAAAGGAGAG
CAAGATGTACGCCTTGAAGTTGAAGACAGCGCTGAGAAATTCAGTATCAA
TCACTTCAAAGAGATGGTCAAGTGGCGCCATACCCTTTGATCCTACCATC
ATCCTTGGAAATGTTGTACATCCTAAGAAATTTGTACCATTACAAAACAT
TGCAGTCTACCAGCAACAGATTGATGGAGAAGAAGATGCTATGCACGATA
ACTTACGCGCAATAAGAAGCCTTCAGATGCTTGCTAAAGAGCTTGACTAT
AATGAAGAAGATAAAGGCACGGAGTCGAAGTTAGGCAAGTCAATGAAAAT
GCTGCACACAAACGTAGATTCGGCTGCTACAAATTATGCAGAGAAATTGC
GAACAAATCTTCCCCTTATCAACAAGGAGAAGGCAAAGATTAGATTGATT
GATGATCATGTTGAAAGCCCTTTGGATTTCAACAAGTCCCTGATCAAAAC
AGATTTACCAATCAGCTCAAACACCATCAAGTTGAATGCTCAATATTTTT
CATTCGACGATGAAAAGCAAGATAGCCAAACGACCATTATGAAAATGAAA
TCATTTGTTTCTGGAGAAGTGGATAGTATTTTTGACAGCAAAATCAGTGG
AAAAGTCTCAAATGCAGTCCATCAACAGACAGCTCAACAACGCGAGGAAC
ATTCAATCGTGGGAACTTTGGTCATCACAGCAACCTGTACTCATGCCAAC
GCGAGTATTTTTTCTCCACTTGTTATCGATGCTGACAAAGCAGTAACGTC
TTGGAACGCGTGCTATACAGAAGATCTAATGGTTGATGATATTGATCAAA
TGAAAGGATATGTCAGTGATAAAAAAACCTAAAACTGACACCCTCAAAGT
TCTTGAACCTGTTCAAGGCAAGGAAGAGACTGCGGAAGAAACAGATAAAA
AAATAACACGACAATTGAAATTGGTTACAGGTGCAACTTATGGTTCGTGT
TTTGTTGGTATGGTTCATATGTTGAGAAGCACATCGACAACATCTAGCCA
AGAAATGTTGGCAACAGCTGAATCATTAGAATCTCACTTTAAAATTGCTG
CTTGGTTTACTGACATGGAAGGAGGCTTTGGAATAAATTCATCATTTTCA
AAAAATCTACTAGTACAAGCTCTACTGAGTCAGCAATCAATCTTATCCCA
TGTTAGTTTGGTATGCGAGGGCCTTATCCCAACAATAACAAGTGAGAAGA
TCGCAATTGGTGTGAAAGCCTTTAGTGAATTCGATCCTGCATCCACCATG
AAACAATTGGCAACTTTGCACAATGAAACCCAGAATGCGAATCAAACCGT
AAGCAGTGCTGCTGATAATGCTCGTGAAGGAAAGAAAGTAACAGAGCTGC
GTGCAACTGACGTCAAAAGCACCATGGCTGCTCTTAGCGAGGTCGATGAT
GGAAAGAATAGCGTTTTGACTGTCAACACAATCATGACAGCTATGGATGA
ATACACAAAGGGAGCGAAAGAAGGAAAGATTGGTATTCCAATCAATTTCT
TCTTGAAGAGTCTTACCAAAGCAGATATCGCAAAAATGTGGTTATCCAAA
TATTTCACTAAGGAAGAGCAAGAGAAGAAAGGAGAGCAAGGGAAGAAAGG
AGAGCAAGGTAGTAGTAACCTCGGAAGTGGCGACCCAGGTAGAGACAACC
CTGGAAGTGACAACCCAGGTAGTAGCAACCCTGGAAGCGGCAACGCAGGT
AGCAGTGTAGTAGTAACCTCGGAAGTGGCGACCCAGGTAGAGACAACCCT
GGAAGTGACAACCCAGGTAGTAGCAACCCTGGAAGCGGCAACGCAGGTAG
CAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000750_pilon | genome | sc0000750_pilon:16716..19373 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1597-1692:97 |
| Aaloc | 1102-1593:1548 |
| Aaloc | 817-1101:1839 |
| Aaloc | 1-816:2659 |
|
