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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:2031751..2035405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019070 ID=XLOC_019070|Name=XLOC_019070|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3655bp|location=Sequence derived from alignment at sc0000031_pilon:2031751..2035405+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGCTCATACCATAGCACACGAGTGTCTGCAGCATGGTTTTGTTCT
AGGACGGAGCCTAGGTGAGGGAGGGTACGGGCAAGTGAAGCAAGCGTCTT
ATGTGAACTTTAATTGCCCTATTGATCCTCTCGCTCGACGGCTCCGCTCC
TCTGGACGAAGTGACCAAGTAAGTTTATGTTGAACTCTGATTTGTGGTTT
ATACGAAACTGGTCGTGTTTTTAGTTAAGATACCTAAAGTTTCAAAGTTG
TTTGGCTTCATTGTTAGACAGTGACTTCAAAACGTTCAAAATCATATTAG
GGAAAGAAATTTGAACATCATTCCTCCTTTTTCATTGAAGGTTGCTATTA
AAGTCATGCCGACTTCACGTGGTATGGCACCCATAATAATGGAGCTTAAC
GCAATGAACTTGTTGAAAGGTTGTCAGAATGTTGTaagtatctttttttt
tcagatttataTACAAGTTGACGCattactattcgatacgctcctttATT
CCCttgaaatcgaattagagagtgtcaactgtaaacTTTTCGTGGAATTG
CCCGGACAGACACCGCTCCACGGAGAGCTACCCCAGAATATAAATATTAT
CAAATGAGCTTTCAGTACTTCCTAAGGTATACTGAAATCCCAGAAACTTA
TagtgaagaaattgaagaaacatattttttcatattttgttaaaCTTTAT
TGATAAAAGGCATTTAAAGTCACGccataaaataaataaattctagacga
gaagataaaaaaggccaataaaggaattggtcttattaaccgatttcgca
agcatgtgcctaggagatctctactaaccatttataaatctttcattagg
cctcatcttgattatggtgatatcgtatatgaccgcccgggaaatgctac
ctttgtgcagaagcttgaatctattcaatataatgcctgtttagctataa
caggctgttttcgtggaacgtctcaagaaaaactatattcagaacttggt
cttgaaagtcttgctgacaggcgctttgctagaagaatgacattcttcta
tggaattattaacaatttagccccttcgtatttacgtaactacctgccag
taagacttacagcaccaggtggccttagaacaagaaatcctatttatcct
cttaatatacgaactgggcgtttccgtaacactttttttccgtactgcat
atctcagtggaatgttctgggaggtaatatacgagatctaccttcaatta
aaactttcaaaaaagcagtctatgaatttttgagacccaagcaatctcat
gtttttgatgttcctgacattcaaggagtgatctttcttaatcgacttcg
ggtcggttgcagccatctcaacgagcataaatctagacatggcttccgcg
acaccttagaccctttctgtggttgccgaactaactctgttgaaaacact
cagcactttcttctgcactgctctatatattcccgtacaagacaatcttt
gttcgacaaacttcagaccctaggcattatttttatTGGAAATAATATTA
CGGCCTTACCAATAGAGTGAATTAGAACACGCCTGcgtcacagacccagt
gggtCTCTCTACTCACTGGAAAGTTtagccaaaattttgtctccgGTGGG
GAAAACACCCTAAGATTTCAGCTCCTCTAGAAAATCGACTTTGTTTTCTA
GAATGTCTATCACATTTGGAGTTTGATAGTAGTTTTCATCCCCGCTATGG
GAAAAAGTTcaaccagggctgtgagacaggggtgtattagaTCGTTACAT
ATGTGACAATTCACACTTTTTATCTTCCTATAGGTCCAGATGCTGGATTT
CTTTCATGGAGAAAATCATTGCTACCTAGTAATGGAGCTCTGCAAAGAAG
ACTTGATGACAACCTTAAACGAACGAATGCATACAAAGCCAAACATAAGT
GAAATCTTCACACAAGTTATGAATGGCGTTCATCAATGCCATTTGAAGAG
CATTGCTCACTGGTAAGATCTTCTTCACCATTGCATATTGGTAACctttt
taaagtctgtctcaaaataatttgcagctgagacaaaaattgCTGTAATT
TTTACtagaatttgaatcaagttgcgattgttctcgttgaaaaaatattt
gtgagtggaatattatcaagtaaaaatttagggaaaaaatgaaaaatgaa
aatgaaaaatgaagaagaaaaagatcaatttcttgtagaaatgtagCATG
ATTagcattttcacaggagtgattcttcatcTTCCTTCTATTGGGTGACA
TTTAGTATTAATTTTACACTCCTGTCTAACAGCCCTgttggaactttttt
ttcacCAGCGGAGATAAAACTTTATATCAAAAATTTAActttggacagaa
attctatgTATAGTATTGCTTCAAGCTGAAAAACCAGTTGGAATGAATGG
CCTTGGATTGCGATTCCTTTtatattgaaattcaaatgagGATGCAATTA
AAGTCGATTTCCcaccgggacgaaattttggccaaatcttTCAATGTGAC
GGGGTTTCACCGGGTCTGTGGCACAGGGTTGTAATTTTAATACTTTTAAT
ACATAGCTGCCAATTACGAGTATACCCTGCATAGTAGCAGAAGTACCATG
AACTGGAGACTACAAACAAACTTGGTGAAGTGGGTAGTAGAACGAACGGG
TAAAGGATGTTAACTTAAATTTTACGGATTTTACAAAATTCATGTTTTTA
TGTTTCAGTGATTTGAAATTAGAGAATGTTCTCATTGATCACAATGGAGC
TGTAAAAATTACAGGTACGTTCTGTTCTCAATGTTTTCATGAGCCATACC
AGTCAAAATTCATTccaataatatttcaaaacaagTCTTTTATACTAAGT
GTGAAGATGtaaatacaaaattttagaACTCCACCAAATAAGACGCTATG
ATAAGCTGTACTTATAAACCACTTATATATATATCTTTTGATGGAGGTCT
GAAACCTGCTGGAGATTACAGCAATTAAAATATTCAGATtataaacaaat
caaaaatatataattttttttctcatttcagaCTTTGGTCTTGGAATCAT
TCCAACCTTGTCCGGTAACGGTTGCAAAACATTTTGTGGCACACCGGAAT
ACATGGCTCCTGAGGTCCTACGTGGATACATAGGCTTCGATAACACGCCA
TACAACCCTTTCAAAGCAGACATGTGGAGCTTGTAAGCTAATGCTTTTCT
CTTTGATTTTAAACTCATCTTTAACAGTTCTTCCATAGCAACCTGTGTCT
TGTGATGTAGATCCTGACGTGATTGATGAGAGCCGATTAATTCAAAACTG
CATTACTCTTTCTGGAAAAGACGAAAGTGACTAGGGTTaaaaaaaGATTG
AACTGAATAAAATTTAATCATTGCTTTCAATAGATTGTGTATAAGAATCC
CGCTCCTATATTTTATCTTTCAGTTCCTCTATTTCCCTGCTTTTATGCAT
CAAAACTCGTAAACGctgttttttaaatcaatcagaaTTTTGCTTTCCCA
CGGCCACTATAATATTGTAATATgcttttacattttctttttgctttcat
tttcaggGGCGCCATTTTGTATGCAATGTTGACAGGAAAGTTTCTTCCCA
TTAAT Coding sequence (CDS) from alignment at sc0000031_pilon:2031751..2035405+ >XLOC_019070 ID=XLOC_019070|Name=XLOC_019070|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1392bp|location=Sequence derived from alignment at sc0000031_pilon:2031751..2035405+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGCTCATACCATAGCACACGAGTGTCTGCAGCATGGTTTTGTTCT
AGGACGGAGCCTAGGTGAGGGAGGGTACGGGCAAGTGAAGCAAGCGTCTT
ATGTGAACTTTAATTGCCCTATTGATCCTCTCGCTCGACGGCTCCGCTCC
TCTGGACGAAGTGACCAAATGGTAGCTCATACCATAGCACACGAGTGTCT
GCAGCATGGTTTTGTTCTAGGACGGAGCCTAGGTGAGGGAGGGTACGGGC
AAGTGAAGCAAGCGTCTTATGTGAACTTTAATTGCCCTATTGATCCTCTC
GCTCGACGGCTCCGCTCCTCTGGACGAAGTGACCAAGTTGCTATTAAAGT
CATGCCGACTTCACGTGGTATGGCACCCATAATAATGGAGCTTAACGCAA
TGAACTTGTTGAAAGGTTGTCAGAATGTTGTTGCTATTAAAGTCATGCCG
ACTTCACGTGGTATGGCACCCATAATAATGGAGCTTAACGCAATGAACTT
GTTGAAAGGTTGTCAGAATGTTGTCCAGATGCTGGATTTCTTTCATGGAG
AAAATCATTGCTACCTAGTAATGGAGCTCTGCAAAGAAGACTTGATGACA
ACCTTAAACGAACGAATGCATACAAAGCCAAACATAAGTGAAATCTTCAC
ACAAGTTATGAATGGCGTTCATCAATGCCATTTGAAGAGCATTGCTCACT
GGTCCAGATGCTGGATTTCTTTCATGGAGAAAATCATTGCTACCTAGTAA
TGGAGCTCTGCAAAGAAGACTTGATGACAACCTTAAACGAACGAATGCAT
ACAAAGCCAAACATAAGTGAAATCTTCACACAAGTTATGAATGGCGTTCA
TCAATGCCATTTGAAGAGCATTGCTCACTGTGATTTGAAATTAGAGAATG
TTCTCATTGATCACAATGGAGCTGTAAAAATTACAGTGATTTGAAATTAG
AGAATGTTCTCATTGATCACAATGGAGCTGTAAAAATTACAGaCTTTGGT
CTTGGAATCATTCCAACCTTGTCCGGTAACGGTTGCAAAACATTTTGTGG
CACACCGGAATACATGGCTCCTGAGGTCCTACGTGGATACATAGGCTTCG
ATAACACGCCATACAACCCTTTCAAAGCAGACATGTGGAGCTTaCTTTGG
TCTTGGAATCATTCCAACCTTGTCCGGTAACGGTTGCAAAACATTTTGTG
GCACACCGGAATACATGGCTCCTGAGGTCCTACGTGGATACATAGGCTTC
GATAACACGCCATACAACCCTTTCAAAGCAGACATGTGGAGCTTgGGCGC
CATTTTGTATGCAATGTTGACAGGAAAGTTTCTTCCCATTAATgGGCGCC
ATTTTGTATGCAATGTTGACAGGAAAGTTTCTTCCCATTAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:2031751..2035405 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 649-696:3608 |
| Aaloc | 499-645:3084 |
| Aaloc | 442-495:2760 |
| Aaloc | 262-438:1834 |
| Aaloc | 169-261:341 |
| Aaloc | 1-168:1 |
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