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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000035_pilon:1996677..2001095+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018634 ID=XLOC_018634|Name=XLOC_018634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4419bp|location=Sequence derived from alignment at sc0000035_pilon:1996677..2001095+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTAATAACTGCATCGACGGCTTCCAATATATTACGCTTACCAAAATA
CAACAAAGCCAAATTCATTTTAAAGCACAACAACAAAGCGCACGCCACTT
CACCGTACAAAACAGAACCGGTACGCAATTTATACAAATGTCTCGATAAA
TGTACTTACGACACACAATGCAAATCTGTCAATTTTGATGAACGCAACCC
AAACTCCACGCAATGTCAGTATGTCGCTCAAGATCGGAACGACTTGGATA
GTTACGTGGACGCACCTGGGATACGACATTACGATACTGGTCGGACAACC
TTAACTAAATGGGTGATGACATCTTACACTAGTTTTTGCGTGGTGCCAGA
AACATACTCATGTGACGTCACATCTGCAAACCAGAAACTAATGATAACCA
GTTCGACAACACATTGTGAAGCCGAGTATGCATATTTTGATTATGACATT
GAATACGGCATACTTTACCATCATTGCTCAGGACGCGAAATAGGTTACAC
TGGTGATTACATCACCTTCGTCCCACAAAGCAAAGCCAACAAACTCACAA
ATTTCTATTGGGCATGGGTTAGAGATTGGAGTAAGTATCTCATCTATTCT
CAGCTGCCGTTCTACTTTTTCGTAAGGACGTAAGGAAAATTACAAACAGG
GTTCTGGAAAGCCTTCTGGttactttccttttttattctaaaaagaaaat
ccaGCACTGGTTCTTGTGGTCGTATATTTAAGTATTGTTTAGATTTTAAA
TTAAAGAGTTCTATAActgagaaattgaaaatttctgagATTTTAAATCA
CTGTAGACCGACGTTTTGAGTGACATACAAACATTGATATTTCTTTGCAG
AGAGTTTTTTAACCAAAAGCACTCACTGTATAAGGGTCGATTCGATCTCG
AATGGATTCCATCTGATGAAGAAAGATAACGAAGAATGCGAAACCACATC
TGCGTACTTCAAGTTCACTTTCCCCTCCTTACCAGGTATTAATGCTTTac
tacttaagggctctgaccatagtgaaattgtaatatttgccacttacaaa
gtttaaatttctacttgatgtagcacacaaaactatggcatgttatacat
attctgttagaccaattatccgtgagtctgaaaatttaagaatcacaatg
agaaaatttgatgaagaataaaatgaagatttttgcgaagaagagtattt
cacctttgaagagcttagttttggcgaagaaaaaacattttgaatctttt
atcgaactaaaattattttttcggaaaatatttctaaaagcttatttgct
tcaaaatcttaaaaatagtgctttttgaccaattttccatccaaattttt
catagaaaaacagccataacttttgatgcattaaggCGAGGCCAAATTAA
TTTTACGGACAGtttgaaaaggttttaaaacaaaaaggttaattacccat
taaaacttagtattttttataaaagaaagttaaaagtgttaaagaatcta
aaacataacttttatgttcagatactaaaatcaattttctgactatggtc
agagcccttaagtaatCATCTTCAGTCGCGTaaatcttctttgaaaatgT
GAAGTTTAATTTCGGCAGAATTTTAATCAACCATTTATAATATCTAACGC
TATCATATGTGCGCATTGACCTCAGTTTGATATGGTTTGATAGCGTTTTA
CTAAACTGAGGACTGGAGTGAGATTCAATTTCCAGTGTGGACTGAATATC
TCCTCGATCGGTAAAGCAGTTGCGCTAGTAATGCCAAAGTCATGAGTTCA
AATCTCACTTCAGTCCTCAGTTTAGTAGTTCGCTACGAAACTGAGGTCAA
TGTAAACATATATACGTGTTGgcacaaatgatttttttaattttttctgt
caTTAAGGCACGCGTAACAAAACAACGATAATGgtgaaaatattgaatta
aacAATTATTAatttaaatacaccttttcgaccatagccGCAAATTGCCG
CGTGAGCAGTTTTCTGTTtactttatcccactaaaaccgtcgcagtcctt
ttttcacacctatagaTAATaggaaaatgtgtcaaaaacgGATTAGATTG
AGTTTAgtgggataattaaataattgaGGGGCACCCGCCTGAACgcacga
ctacggtcgaaaaggtgtatcaacATTTAATTTACAGCCCCTTCCAAAGT
TTGGACAACAGTTTTTGAAAGCACCTCGACATCTGCAGATTTTTGGTCAA
TTACGTCAGCATCAAGCTATCCAAATAGCTACACCCATTCAGGATACATG
GATGATTTTACAATCATCGCTTCATATAAAGATTACGCTGCTATTCGAAT
GCAAACATACTTTGTGGCTCCCAAGACAGGGTATGTTAAAGAAGAGTCAG
CCGGATAAAATTGCTTCGACATCTTTTGTTCATTAAATCGGAAGTTTTCA
GATAAAATTAGTTTTAGAATTGACTTTCGAGGTACGAAAACTTAAAAGAA
TAACAATGATTCGTTCGTCAAGTTCATCTTAGGTGCCTTTTGTTCtttta
atttagtttttaatAAATTATTGGATTAAGAACAAAACACCCAAAGCACC
TTTAATAATGAACCTTTCTTAAGAGCATGTAACTTTATGGTATTACACGA
TCAAACACAATATAAACAATGATCAGGCCGTACTTTTATGACAACCTTAC
ATCCATGATCATTCGGAATATTTCTCTTCAAGAAAAACGTGATTAAATAT
ACATAACATAGCAAAAATATATGGGTGGGAATCCACCAGGGGGGATTTTT
CTGGGTGGAAATTTTCCAGGTGGGAATTCACCAGAGGAGTGTTCAGTGGG
TGGGAAGGGTGATATTGATTCCGGGAATCATATATcgccatgctatgatt
tcttattctatatactgatggcgaaatatatagcatgttATGGGCCGAGA
GTTtaaatttcccagatcctaataacggtcgAAAACAtacccaaccaaat
tttgttattcttttactggtcacactttctcagagaaagcgcaacttccg
aaatttggtttttgttttagtaagtgaggacagcgctaaattcgaatttc
ccactgtataTTTTTTGAGGCAGATTTGTGCCTCACAGGTCATACCTCAG
ATACATTAGATTATAAAAATATACAGGACAGCTCTCCTGTCTAATACATT
CAATGTTGTTTCTATTTAGATATTATACATTTAATGTTGCTTGTAACGAG
CAATGCATTTTATACCACGGTGAAACAGAAAGTACAAAGCAACTCATCGT
CCAACAAACTACCTATGGACATTGGGTCAATTATGCAGAATGGCTAAAGT
AGGTTCCATATTTTTATCTCCCCTGTTGTTTTTTAAGAATTGCACTAATA
AGCATATCTATGCTCAGATATGGcaaaaaatttaagcatatgctaacGGC
CAACattttccagtttttgctctttttggctgggattttacggcttttca
gaatttctctaaaattttgcttggGATATAAGCATCCTACATCCTACTAT
TTTCAAACGCTCTATCTAAGTATCTCCGTTccagtttttcgatttttgta
tgcttatgaaaaaagtttacACTCTATACTGAAAGTTTGCAAGAGCTGTG
TGGTGTGGTGGGTTGAATCTTTACACCGTATCCAACAGCTTTCTCTCTAT
GAGGGTTTCCTTTAATTCTAACAAAATGATATCTGAATCCTATCACCCTT
actggcgttatttttgggctcgtgacgtaataagggccggcgtataAAGG
Gccagattttgcaattttaaccaaagtggagttaattttttatcattatt
tttcaatttaaaggattttaggtatgattcgaagacacAAATTATctatt
gttttactccatatttaaaaaaaacttcagtgaaatatttaatatattta
aaaaccagtgattttcgatggaatttttaacagtttactactgtaaaatg
acattttaatgtaaattttagtcaatATTTACTAATTTAAAGCACAAGTA
gccatttttacaaattttggcgttattaacggccctcattggcgtaagcc
caaaattaggctgtggcATAATAAGGGCCGGCGCAAAAGGGGCCAGCGTT
AAATTAGGGCCGGAGTAAAAATGGCCGATAAAACCAGttttacgaaaaaa
gaaaattccgcTAATACAAAAATGACATTCTATATTTTCTCTGATAGGTA
TCCCGCAGAACAACAATCAGCAGGAATATACATGGAGGAAGGACGTGACT
ATTACATGGAAGGCCTTTATCGTGAGACAGGAGGAAAAAGCCTGATGAAC
GTTGCATTTAGAGCACCAGGGTTTGATGTTTTTCGAATAGTATCTTACAG
ATATCTTAAGAAGTACTGA Coding sequence (CDS) from alignment at sc0000035_pilon:1996677..2001095+ >XLOC_018634 ID=XLOC_018634|Name=XLOC_018634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2418bp|location=Sequence derived from alignment at sc0000035_pilon:1996677..2001095+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTAATAACTGCATCGACGGCTTCCAATATATTACGCTTACCAAAATA
CAACAAAGCCAAATTCATTTTAAAGCACAACAACAAAGCGCACGCCACTT
CACCGTACAAAACAGAACCGGTACGCAATTTATACAAATGTCTCGATAAA
TGTACTTACGACACACAATGCAAATCTGTCAATTTTGATGAACGCAACCC
AAACTCCACGCAATGTCAGTATGTCGCTCAAGATCGGAACGACTTGGATA
GTTACGTGGACGCACCTGGGATACGACATTACGATACTGGTCGGACAACC
TTAACTAAATGGGTGATGACATCTTACACTAGTTTTTGCGTGGTGCCAGA
AACATACTCATGTGACGTCACATCTGCAAACCAGAAACTAATGATAACCA
GTTCGACAACACATTGTGAAGCCGAGTATGCATATTTTGATTATGACATT
GAATACGGCATACTTTACCATCATTGCTCAGGACGCGAAATAGGTTACAC
TGGTGATTACATCACCTTCGTCCCACAAAGCAAAGCCAACAAACTCACAA
ATTTCTATTGGGCATGGGTTAGAGATTGGACTTTTAATAACTGCATCGAC
GGCTTCCAATATATTACGCTTACCAAAATACAACAAAGCCAAATTCATTT
TAAAGCACAACAACAAAGCGCACGCCACTTCACCGTACAAAACAGAACCG
GTACGCAATTTATACAAATGTCTCGATAAATGTACTTACGACACACAATG
CAAATCTGTCAATTTTGATGAACGCAACCCAAACTCCACGCAATGTCAGT
ATGTCGCTCAAGATCGGAACGACTTGGATAGTTACGTGGACGCACCTGGG
ATACGACATTACGATACTGGTCGGACAACCTTAACTAAATGGGTGATGAC
ATCTTACACTAGTTTTTGCGTGGTGCCAGAAACATACTCATGTGACGTCA
CATCTGCAAACCAGAAACTAATGATAACCAGTTCGACAACACATTGTGAA
GCCGAGTATGCATATTTTGATTATGACATTGAATACGGCATACTTTACCA
TCATTGCTCAGGACGCGAAATAGGTTACACTGGTGATTACATCACCTTCG
TCCCACAAAGCAAAGCCAACAAACTCACAAATTTCTATTGGGCATGGGTT
AGAGATTGGAAGAGTTTTTTAACCAAAAGCACTCACTGTATAAGGGTCGA
TTCGATCTCGAATGGATTCCATCTGATGAAGAAAGATAACGAAGAATGCG
AAACCACATCTGCGTACTTCAAGTTCACTTTCCCCTCCTTACCAGAGAGT
TTTTTAACCAAAAGCACTCACTGTATAAGGGTCGATTCGATCTCGAATGG
ATTCCATCTGATGAAGAAAGATAACGAAGAATGCGAAACCACATCTGCGT
ACTTCAAGTTCACTTTCCCCTCCTTACCAGCCCCTTCCAAAGTTTGGACA
ACAGTTTTTGAAAGCACCTCGACATCTGCAGATTTTTGGTCAATTACGTC
AGCATCAAGCTATCCAAATAGCTACACCCATTCAGGATACATGGATGATT
TTACAATCATCGCTTCATATAAAGATTACGCTGCTATTCGAATGCAAACA
TACTTTGTGGCTCCCAAGACAGGCCCCTTCCAAAGTTTGGACAACAGTTT
TTGAAAGCACCTCGACATCTGCAGATTTTTGGTCAATTACGTCAGCATCA
AGCTATCCAAATAGCTACACCCATTCAGGATACATGGATGATTTTACAAT
CATCGCTTCATATAAAGATTACGCTGCTATTCGAATGCAAACATACTTTG
TGGCTCCCAAGACAGGATATTATACATTTAATGTTGCTTGTAACGAGCAA
TGCATTTTATACCACGGTGAAACAGAAAGTACAAAGCAACTCATCGTCCA
ACAAACTACCTATGGACATTGGGTCAATTATGCAGAATGGCTAAAATATT
ATACATTTAATGTTGCTTGTAACGAGCAATGCATTTTATACCACGGTGAA
ACAGAAAGTACAAAGCAACTCATCGTCCAACAAACTACCTATGGACATTG
GGTCAATTATGCAGAATGGCTAAAGTATCCCGCAGAACAACAATCAGCAG
GAATATACATGGAGGAAGGACGTGACTATTACATGGAAGGCCTTTATCGT
GAGACAGGAGGAAAAAGCCTGATGAACGTTGCATTTAGAGCACCAGGGTT
TGATGTTTTTCGAATAGTATCTTACAGATATCTTAAGAAGTACTGAGTAT
CCCGCAGAACAACAATCAGCAGGAATATACATGGAGGAAGGACGTGACTA
TTACATGGAAGGCCTTTATCGTGAGACAGGAGGAAAAAGCCTGATGAACG
TTGCATTTAGAGCACCAGGGTTTGATGTTTTTCGAATAGTATCTTACAGA
TATCTTAAGAAGTACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000035_pilon | genome | sc0000035_pilon:1996677..2001095 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1039-1209:4249 |
| Aaloc | 910-1035:3221 |
| Aaloc | 718-906:2190 |
| Aaloc | 583-714:853 |
| Aaloc | 1-579:1 |
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