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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:777553..780887+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018399 ID=XLOC_018399|Name=XLOC_018399|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3335bp|location=Sequence derived from alignment at sc0000006_pilon:777553..780887+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTGGTTCACAGGTGAACAAATTCTATGGTTTCTAATTATGGTGGA
TTTGCAAACAGTTTGTATCCTTGGGACTGATGAATTCATTGATGTCGAAT
ATAGTTCAAATGAAGTTGATAAATTTAAAATACACGGCTCGTCATTTGAA
GAGTCAGtttgcaaaacaaaatttaacgctAGATTAGAATATAAATGGTC
AGACGGTGTAGAATGTAAGTGTGCCGTAGGTGAAACATTTATCGCTTTGA
ATGGAGAAGTTCCTAAATGTCAAGTTGAAgatataaacaatagaattttc
ggTAGGTATATTTCATCAGTATCGCTTTAACAGTAATCCatgttttttaa
agaattaatgaaattataaaaagaGCTGCAATATGAGGATAATTATTTCT
CCTGCAACtgcgaaagaaaaagaaagaataagaaatactttcttttttgt
cattatgcatTCCACTTAACTTTTTTATTAGATTGTTCTTGCAGTGGGCA
ATGCTCTCAAAATTTAAAGCGACATTACCTTGGCAATGTCATTGGGAAGA
TTTCTTTAGGAGACTTGGACTGCTCGGGGAATCAATTTCAGGAGAGCATC
TACTCATGGAATGGTAAAAGGTTTATCCCAAGATCAACCTTTGCCGAAGA
TTTCActggaaaatttcaaacagcAAGCATTTTTAATGTCGAggtacttt
tttttgtttttgttaatcTTGATTTTGCTGAACATTTATTTCCTTTGAAT
TTGGCGTACTAAGTCAACTTAGATTTACTATGTCAACTTAGAATTGCCCA
GTCAACTTAGAATTACTAAGTCAACTTAGAAGTACTAAGTCAACTTAGAA
GTACTAAGTCAACTTAAAAGTACTAAGTCAACTTAGAAGTACTAAGTCAA
CTTGctgctttcagcccttgccgccgacaaatttcttcctacgcttatct
aactcctacgctcacttttcccgcctgataccgttccagcccgaccgGCA
TGCCAGTCTAGATTTTATAACTACTAAGTTGACTTAGTGCTTGTAAGTTG
ACTTAAAGAgaccccccagcggaccctcaattcatgcaatcacgcaattt
tttttcaaaattcatgcattcacgcaaattttccttgaGTTTCACACAAT
aatccgatttttcagaaaatcgggaaattttcgtgaaaaattggggaaac
attggaaaattaggaaaactacccataattggtagaaaaaaggggaaatt
cacgtattcacgcaaaaaatagcccagattcacgcattcacgcaatcaaa
aagtggattttcacgttcacgcaagttttttcaatacacgcattcacgca
attttttttcaattttcacgcattcacgcaaccaaaaatgcccattcacg
ccattcacgcaaaccgctgggggcccccTTAAAGAGGATAAGTATAAGTA
GTTTAAACATGGCGCTAATAAGCCACAGTATTTTTCTTCATCATTTCAAC
ATAATTGTTTctatttaaaaactttaatcgTAATTTTTCAGTGGGAGAAG
GATAGACCATCTGGTGTATACAGCAAGTACGAAGGCGTGTTGATTAAATA
CAAATTAACTTTCATTTGTGGTGGAAAAACGATCGAAAGATGTCTTATTT
GGAAAGGCGAAGGGAAACAGGAATCTAGTAAGTTTTTCAACGCATTTTCA
TGTTCGTAtttttttAATTCGCCTATTTGAATCATTACAAGTGCATTGGG
CTGTAATCTAGAGTCTTGCTTTTCGAGAAGACGAGGACGCTACTACTTTC
ATTACATAGCTCTCAACAAAATAGAGCCATTTCTCGATTGATCTTCAtgt
attgggctgttccattagaAAACaatacagggggtggacaaactatttca
aatcaaaaaataattattggaaatgtgtggatacctcCTAGAAAATGGCA
AGATTTGCTAAAACacctttgaaaaaattattttcataccttaaagtgag
gatGCAAGAAGTAAAATCAATACCCCCTGGAGATTTTTCTTGGATTACCC
TCTGAAAATGTTCGTCCATCCACCTgtcctgtatggatataaaatggaat
ggcccgcTGCATGCCCATTGCaatcaaatattttatcttaattttaaaat
taaaaaaaaaagacataaagCAATGCAATGCCCTGTATAAGTCATCAGTC
AGAATTTTCAAGTTAGAATTCTATAAGTGTATAAATTTCAGTCAGAATCA
ACTATGATATCATTACACCACCCACCACCCAATCAACCATTCCACCTAAC
ACTCCATccacaaagccaacaactactacgacaaccacacaatcaaaaac
acccacaacgacaaccacacaatcaaaaacaccgacaacgacggcaaaTC
CTGAACGCACAACAAATAGCAATAATATTGACCATTCAAAGACATTTGAC
ACCACCACCAAACCGATGATGACGACGCGTTCTATCAGCGGTAGCGATAC
AACGACACAAGACTCTTCAACAACGACGATCGTTATCGGCAGTTTGGTCG
GCGTTGTCGTGCTTCTCATAATCGTCATTGTTTTGGTGATTGTTTGTTGT
ATCAAGAAAAGGTAAGACTAAAAAGACacgatatacacgtttttttataa
gaatattcaaaaattttaagcctttggatgctctttttttttagttttaa
tcctaaaaatgttcttagaatgttcgtaattttaccattttatgagtatt
tttgcgCAATTTCCTTAGAAATTTGGTATCcagaaagccttaaaatgttc
ttaattagttcttaatatttttgcacTCGAAGCCTTTTGTTATGTTCATA
TAGTTTAAGGTTTTGTGCATCAAGGCCTCTCATTTTCCCTGAATAAAATT
TcgaaatgaaaattataatagAGACTATGTGCTGTTTTTGTAGAAGTAAG
TAATGGaaaatatttgttcttttctattAAACATTTAGACCGTTCATCCC
TATTCTTATGTTACACATCTCAAGGCATACTAACTTAGTAATGGTTTGTT
ATGTCTTCTGTTTCTGTTAGGGAAGGCgaagtaaacaaaaacaaagcacC
AGTCCGATTTCACGCTAATAATCCTGCATTCAAAGCATCCACACAAAgtc
aacaacaacacaacaatTATGAATATCAATACCCTGAAGTTGGACCTGCA
TCGAATGTCCATCCGAACCAACAACCGAGAACTACTGGATATGAGTTTGA
TCCTGGAGATGAAGAAAACTCACAGTACCAGCCATACCTCAAACCGGTCA
CCTCATTATACGAAACCATACCTTACAACGATTGA Coding sequence (CDS) from alignment at sc0000006_pilon:777553..780887+ >XLOC_018399 ID=XLOC_018399|Name=XLOC_018399|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2568bp|location=Sequence derived from alignment at sc0000006_pilon:777553..780887+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTGGTTCACAGGTGAACAAATTCTATGGTTTCTAATTATGGTGGA
TTTGCAAACAGTTTGTATCCTTGGGACTGATGAATTCATTGATGTCGAAT
ATAGTTCAAATGAAGTTGATAAATTTAAAATACACGGCTCGTCATTTGAA
GAGTCAGtttgcaaaacaaaatttaacgctAGATTAGAATATAAATGGTC
AGACGGTGTAGAATGTAAGTGTGCCGTAGGTGAAACATTTATCGCTTTGA
ATGGAGAAGTTCCTAAATGTCAAGTTGAAgatataaacaatagaattttc
gATGAGGTGGTTCACAGGTGAACAAATTCTATGGTTTCTAATTATGGTGG
ATTTGCAAACAGTTTGTATCCTTGGGACTGATGAATTCATTGATGTCGAA
TATAGTTCAAATGAAGTTGATAAATTTAAAATACACGGCTCGTCATTTGA
AGAGTCAGtttgcaaaacaaaatttaacgctAGATTAGAATATAAATGGT
CAGACGGTGTAGAATGTAAGTGTGCCGTAGGTGAAACATTTATCGCTTTG
AATGGAGAAGTTCCTAAATGTCAAGTTGAAgatataaacaatagaatttt
cgATTGTTCTTGCAGTGGGCAATGCTCTCAAAATTTAAAGCGACATTACC
TTGGCAATGTCATTGGGAAGATTTCTTTAGGAGACTTGGACTGCTCGGGG
AATCAATTTCAGGAGAGCATCTACTCATGGAATGGTAAAAGGTTTATCCC
AAGATCAACCTTTGCCGAAGATTTCActggaaaatttcaaacagcAAGCA
TTTTTAATGTCGAgATTGTTCTTGCAGTGGGCAATGCTCTCAAAATTTAA
AGCGACATTACCTTGGCAATGTCATTGGGAAGATTTCTTTAGGAGACTTG
GACTGCTCGGGGAATCAATTTCAGGAGAGCATCTACTCATGGAATGGTAA
AAGGTTTATCCCAAGATCAACCTTTGCCGAAGATTTCActggaaaatttc
aaacagcAAGCATTTTTAATGTCGAgTGGGAGAAGGATAGACCATCTGGT
GTATACAGCAAGTACGAAGGCGTGTTGATTAAATACAAATTAACTTTCAT
TTGTGGTGGAAAAACGATCGAAAGATGTCTTATTTGGAAAGGCGAAGGGA
AACAGGAATCTATGGGAGAAGGATAGACCATCTGGTGTATACAGCAAGTA
CGAAGGCGTGTTGATTAAATACAAATTAACTTTCATTTGTGGTGGAAAAA
CGATCGAAAGATGTCTTATTTGGAAAGGCGAAGGGAAACAGGAATCTATC
AGAATCAACTATGATATCATTACACCACCCACCACCCAATCAACCATTCC
ACCTAACACTCCATccacaaagccaacaactactacgacaaccacacaat
caaaaacacccacaacgacaaccacacaatcaaaaacaccgacaacgacg
gcaaaTCCTGAACGCACAACAAATAGCAATAATATTGACCATTCAAAGAC
ATTTGACACCACCACCAAACCGATGATGACGACGCGTTCTATCAGCGGTA
GCGATACAACGACACAAGACTCTTCAACAACGACGATCGTTATCGGCAGT
TTGGTCGGCGTTGTCGTGCTTCTCATAATCGTCATTGTTTTGGTGATTGT
TTGTTGTATCAAGAAAAGTCAGAATCAACTATGATATCATTACACCACCC
ACCACCCAATCAACCATTCCACCTAACACTCCATccacaaagccaacaac
tactacgacaaccacacaatcaaaaacacccacaacgacaaccacacaat
caaaaacaccgacaacgacggcaaaTCCTGAACGCACAACAAATAGCAAT
AATATTGACCATTCAAAGACATTTGACACCACCACCAAACCGATGATGAC
GACGCGTTCTATCAGCGGTAGCGATACAACGACACAAGACTCTTCAACAA
CGACGATCGTTATCGGCAGTTTGGTCGGCGTTGTCGTGCTTCTCATAATC
GTCATTGTTTTGGTGATTGTTTGTTGTATCAAGAAAAGGGAAGGCgaagt
aaacaaaaacaaagcacCAGTCCGATTTCACGCTAATAATCCTGCATTCA
AAGCATCCACACAAAgtcaacaacaacacaacaatTATGAATATCAATAC
CCTGAAGTTGGACCTGCATCGAATGTCCATCCGAACCAACAACCGAGAAC
TACTGGATATGAGTTTGATCCTGGAGATGAAGAAAACTCACAGTACCAGC
CATACCTCAAACCGGTCACCTCATTATACGAAACCATACCTTACAACGAT
TGAGGAAGGCgaagtaaacaaaaacaaagcacCAGTCCGATTTCACGCTA
ATAATCCTGCATTCAAAGCATCCACACAAAgtcaacaacaacacaacaat
TATGAATATCAATACCCTGAAGTTGGACCTGCATCGAATGTCCATCCGAA
CCAACAACCGAGAACTACTGGATATGAGTTTGATCCTGGAGATGAAGAAA
ACTCACAGTACCAGCCATACCTCAAACCGGTCACCTCATTATACGAAACC
ATACCTTACAACGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:777553..780887 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1021-1284:3072 |
| Aaloc | 652-1017:2244 |
| Aaloc | 514-648:1542 |
| Aaloc | 304-513:484 |
| Aaloc | 1-300:1 |
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