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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3628545..3632209- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017844 ID=XLOC_017844|Name=XLOC_017844|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3665bp|location=Sequence derived from alignment at sc0000002_pilon:3628545..3632209- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGAAGAAAAATACAAAAAATGGATCCAGGACTGAGAAAACAACTCGG
TGTGAAGAAATGTATCTTTTCTAAGCTTTTCCTTTTGCATTTAATATATT
CACTTTGTTTTTTTCCAAACTATTTAATTTGATAGAAATATCAACCATCA
TCGTTTTCAATTAGAATTTGTACCTTAGTAACAACTTTATACCAAATATT
TAGCATTGCAAGCATTGGAACAAGTATCAAGCCCAAGTTATCGTTCAGCA
TCCCCACTTTTGAAAGAGGCTGGAACACCTGCTCCTTTTCTTCCTTCAAT
GAAGAAAGATTTATGTAAGTTTGTCGTTTTATAATTACTATAATCTATCG
TATCCAAATGTATTTTCTTTTTAAATCTTGCAATAATTTCAGGGATTTTT
CTTAGCCCCTTTCTGCCCCTTTTAGTATTTGAAATTTTTTTTTGTTGTTC
ACAAGCAAAAATAACTTACTTTAAGGGTTCCCGCCAAAATTAAATATTTT
GTTCACTCACCAAATAAGTTCCCCCCAAATTAAGTTCCCACCAAAATTAA
ATTTTTTGTTTCCTTGCCTAAATGACCCCTGAAATAGACCTTTTCATAAA
TTACGTCACGAACATCACTTGCCTCGTTTTGAAATTATTGCTATGGTGAT
TAACTCCCAGCGGATTTTAATAAAACTACTTTCTATTTATAAAAAAATCA
TTTAATGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAGG
CAAGCGGTGTTCGTGACGTAATTTATGAAAAGGTCTATTCATCAAAATTG
CTCAAAATAAGGCAAAATAGAACAGATTTACGCTGTCATTTGCCAAAATT
AGTTCCCGCCAAAATTTAGAATTTTTTAAATATTTGCTGCCCCCAAAATT
AGTTCCTGCCAAAAAAAGTTCCCTTAAGGTATATTATATCTACATATTCA
CCAAATTTTTTGGGAAATTTCACCCCCTAAACCCCCACCACGGCTTTGTC
CTGGACCCACTGGGGACTTTATAAGCCCCCTCCAGACCCTTAGCTTCATC
ATTAATGCCACAGTTTCGCTGAGCAGATGATCTTTTAGGTTGCTAAATTT
GGATGTTTTGTGTAAAAAGTATTTAAAAATAATTCTTGAAATTTATATTT
TTAGTTGCCAGTACAATTACAGAAAAACCTTCTCTCTTTGATGTGAGTGT
GTTTTCACTTTATTTCAATTTTTGGTGTGTTTTCTTATAAACCTAGCTAT
AGATAAAGACTCAACATGTTTAATTATGTATGTAATTTAAAGCCAGTGCA
TACATTTTGGCCGATTTCTTGTCTTGCAAAACAATAAAATTACTTATATC
TATTAAAATTGATACCATTTTTTGTAAAGAACTCAAAATGTTATTAATAA
ACAAGGTTGGTAATAACATTCATAAGATGTAAAAAAGAAAAGAGAATAAA
AGAGAGCTAAATATCAGGCAACAAGCCAGAACAAGCACTGGCAGAAATTA
GAATTTCTTAATAATGCAGATGGGGCTTTAACAATTTCAAAACAAAGTCT
GAATGAAGTCTGAAACCAGGCTCTATCAAAGTAAATCTTTTAAAAGAACA
AAAACATTAAGTGTGAAAACGAAAATAACACACAGACAAAATTAGATACA
AACTACGACTATTAATATATAGAAGTGTCAATTAATCTAAGTTTTTGCAA
GCTCATGATAATTATTTTAGTCATTCAATTCGAAGGCAAATGAATCTAGA
GGATCAGAATCAAGTTTTTATCATCAGGTATGTTCTTTGTATTATTTTTG
ATACAACTTCTCTACTCAAAGTTTTTATCAATTTTTTTGTTCTGTCATTC
CTTTTGATTTAGAAATTGAAAAGTATTGACTCGTACTCTTAGGTGCCAAA
TAAACGGGGGGGAATCGAATAAATGGGGGTTTAGAAAAAATTTTCAAATT
AAATAAATGGGGGGGACTTAATTACCGGGGGGTTGGAAAATGGACCTTTA
AAAACCCTAAAAAGGGTCTAAATAGGAATTTTCCTTTTTGTAGCTGGGAA
TTTTTTCAAAAATTAATAAACGGGGGGGGGGCCTAATAAGGTCCGGGGGG
GTTGGAAAAAAATCGAAAAATTAACGGGGGGGGGGGGGCGTTATTTGGCA
CCTAAGAGTATCTTATTTTGTTTTGTATATTAGAAAAACGATTTTCTTTT
ATCATTATAGCAATCATTCTTAAATGACAGTAATGCTACAAGAAATGACA
CAATGAATTTCTCGCTGAGAGCAGATCCACAGGATCCTCAGATTGAAAGT
AAAACCTCAAATTTATTTGGAGGAATATTGAAGTTGTAATTTTGATAAAT
GAATACCAAATATTGTCTCTGGCCTTCAGAAGGGCTACATACACTAAGCA
ATATATTATCAGGCAATATGTTGTGAAGTGCTCATCTACAATATATTGCC
AGATCCCTTTGCTCTGTTTTTTGTTTATTTTATAAAGTACAGTTCACACT
ATACTGTCTAATATTATTGTTCACCTATATCTTTTGTAGTCTAAGTAACT
TTTAAAGTTTTCTATATATTGTTTTGTTTCCAGATTGTATGGGAATGTTT
GGTCAATTCATGGACCTTTATTCAAACCATCCACATTCTGGTGATATCTT
TGAATTGATTGACCAATATGAACAAGTAAATAAATCATTACTTTTTCATC
TCTTACTGTCCCTTCTCGAAATTTAGTTCACACTCTACTTTCATACATAT
CCATTGTGATTATTGTACTAAGCGAAGCTGCCAATTCTCGTGAAAGTCAT
TTTAAGATCACTGTCGTTTGAATCAGTCCAATCAAAGCCAAGACTTGAAC
ACGTCAGCTTTGAATTTTATACCAATCATAGAACGATTGTAGAACATATG
TTCTTTCTAAAGGATTTCATCCCTTATTGATCTTTTTGTTTTATTTCTCT
TAAAGACATGTCGGAAAAATATCAAGCAATTATTGGAATTTATCAATAAG
ACTGACCCTAGTCGCAAAAGGTACATGATTACAAATTACGAGATTTTGTG
ATGTTTTGCAAAGGTTTCTTTGTACAGATTGAATATTACACATGATTATA
TGTGAATCTCCAAGCAATTTTGAGTACATAAAAATTCTTCTGGTTTGATA
CTGGCAAATCTATTGGTATATTGCCGGCAACACTCCTGTTGAGCGATCTA
TCAATTACATGAGCTATAGGAATAACTTCCAAAAGCTTTACAGAATCTTT
TTCAATACAGAATGAAGAAAGCAATCAACCTTTTGAATCAACTTTATCAA
GAATGTTACACTTGGAGGCTTCTTGGATCTCTAGTACAGTAAGTTAAAGA
TTTGAAAAACTCTCTTCAAGTATACTCAAATCACTTCACTTTATTATTAA
GTACCAGACCATAGCCTGGAGACTGTCATAGCTTTTCCCAGTCCTCTTTG
CACTTAAACGCCATCAGGCTAAAAAATTCCCAGTATAAAATCATATGTAG
CAATTGTAGGTTAGTGTTTTATTTCTCAATGTTATTTCTTCTCTTAAAAA
CCTGACTTTCTATTCCAGTGACCGTTTGATGACAGAATCTATGGAGGAAA
TGGATGAGGACTTGGATGAACCAACCTACATTGTAATTCTATTGTTTTTT
ACCATTGTAATGTAA Coding sequence (CDS) from alignment at sc0000002_pilon:3628545..3632209- >XLOC_017844 ID=XLOC_017844|Name=XLOC_017844|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000002_pilon:3628545..3632209- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGAAGAAAAATACAAAAAATGGATCCAGGACTGAGAAAACAACTCGG
TGTGAAGAAATTTTAGAAGAAAAATACAAAAAATGGATCCAGGACTGAGA
AAACAACTCGGTGTGAAGAAATCATTGCAAGCATTGGAACAAGTATCAAG
CCCAAGTTATCGTTCAGCATCCCCACTTTTGAAAGAGGCTGGAACACCTG
CTCCTTTTCTTCCTTCAATGAAGAAAGATTTATCATTGCAAGCATTGGAA
CAAGTATCAAGCCCAAGTTATCGTTCAGCATCCCCACTTTTGAAAGAGGC
TGGAACACCTGCTCCTTTTCTTCCTTCAATGAAGAAAGATTTATTTGCCA
GTACAATTACAGAAAAACCTTCTCTCTTTGATTTGCCAGTACAATTACAG
AAAAACCTTCTCTCTTTGATTCATTCAATTCGAAGGCAAATGAATCTAGA
GGATCAGAATCAAGTTTTTATCATCAGTCATTCAATTCGAAGGCAAATGA
ATCTAGAGGATCAGAATCAAGTTTTTATCATCAGCAATCATTCTTAAATG
ACAGTAATGCTACAAGAAATGACACAATGAATTTCTCGCTGAGAGCAGAT
CCACAGGATCCTCAGATTGAAACAATCATTCTTAAATGACAGTAATGCTA
CAAGAAATGACACAATGAATTTCTCGCTGAGAGCAGATCCACAGGATCCT
CAGATTGAAAATTGTATGGGAATGTTTGGTCAATTCATGGACCTTTATTC
AAACCATCCACATTCTGGTGATATCTTTGAATTGATTGACCAATATGAAC
AAATTGTATGGGAATGTTTGGTCAATTCATGGACCTTTATTCAAACCATC
CACATTCTGGTGATATCTTTGAATTGATTGACCAATATGAACAAACATGT
CGGAAAAATATCAAGCAATTATTGGAATTTATCAATAAGACTGACCCTAG
TCGCAAAAGACATGTCGGAAAAATATCAAGCAATTATTGGAATTTATCAA
TAAGACTGACCCTAGTCGCAAAAGAATGAAGAAAGCAATCAACCTTTTGA
ATCAACTTTATCAAGAATGTTACACTTGGAGGCTTCTTGGATCTCTAGTA
CAAATGAAGAAAGCAATCAACCTTTTGAATCAACTTTATCAAGAATGTTA
CACTTGGAGGCTTCTTGGATCTCTAGTACATGACCGTTTGATGACAGAAT
CTATGGAGGAAATGGATGAGGACTTGGATGAACCAACCTACATTGTAATT
CTATTGTTTTTTACCATTGTAATGTAATGACCGTTTGATGACAGAATCTA
TGGAGGAAATGGATGAGGACTTGGATGAACCAACCTACATTGTAATTCTA
TTGTTTTTTACCATTGTAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3628545..3632209 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 592-687:97 |
| Aaloc | 514-588:405 |
| Aaloc | 448-510:711 |
| Aaloc | 358-447:1081 |
| Aaloc | 268-354:1456 |
| Aaloc | 211-267:1946 |
| Aaloc | 175-210:2510 |
| Aaloc | 64-171:3461 |
| Aaloc | 1-60:3666 |
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