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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:273690..277238+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015693 ID=XLOC_015693|Name=XLOC_015693|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3549bp|location=Sequence derived from alignment at sc0000103_pilon:273690..277238+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTGCTGTGGAGCAgaagaaaaatggtcaaaaactcCGCCTACCCGGACT
TTCATTTTGGTTCATGTTTGATTGGCCTGAATACGCGCTAAGCTCATTTG
AAAACCTGCTGACCAAATTGTTCATGTCCATTGGTTTGGAACATTTGAGA
CGTAAAGCAATCAATGGAAGAGCTTTGTTCTCTGTTTCACTTATTACTGT
GTGGCTGATGtatctttttttgtatttccagTCTgcatataagaaatatt
ttaattgaatGAATGGCTTCGAGCTTTAGGGTTTTTGTTATGAATCTTTC
GCTCCCCTAGGTAACAAGATTtgtattttcttataatttctTCCACAGCT
AAGACCACCGTTTTGGAGAAATGTCTCGCTTCATTGTGCATCACTTTCAA
GGATCACGCCAACGATAGTCTTCTTCACTTTATGACGAAAAGCCAAACCC
GCTGTTTAAAAGAAGAAACCACCAAAGAAAATGTCGATCTTGAAACCGTT
GAGCTGACCGAAGGCACATACCACTCGAGCCAGCATCTAGCAACACTATT
TCTTTCAAAACGAATGAACCTGAAATGTGCCGAAGAGCTGGAGGCAGCAA
AAATCAACTTGCAGCAGTACCTCCAGCTGAAAATTGTGGACGAAAGTGGT
AAGTGCGCATATGATTTCTGATTAAGATTCCTGTGAGAATGGTCTAAAAA
CAATACTTTCACATTAATGATACAAAATTGTTTGCAGAGTCCTTATTCTt
acggtgctttattttaggagACACAGGCATCCCGCGGATGAAACCTTCAA
ACAAGTTGAATCAAGCTGTAGATATTGTGCGTCGGTACATGGAGAAATTC
AAATATGGCTTGTACGAAGGCTCCGTTTATAAAAAGCCACGCGTGGCCAA
GTTCACCTACGTTTATTGTTCAGACGTCCATTCATTTATCCATCATATTG
GGTAATTCTGAAGTTGCGGATGTCATTGTATCGTACGTCGTATTTTGTAC
ATCGTTTCCTTGCTTTCTGTAAAATCATGTCGGATGATCGACCCCATAGA
AATTGATTTTAATTACATCGAAGTCAAACCACTTGGGACATGCTTTAACA
TAGAAGGAAAACGCTTTGAGGTTGATCCTGCTAGTCTGAAAGgtaaattt
tggcaattttcaaaTATGCGACTTTCTCATAGGTTTCAAGTTATAAAGTG
GGTTTTAACAAGTCCATAATCGCGGTTTTCGTTGCACTTCTTTTAATGCT
TTTTAATATTCCTTTCGTCTTTACAGGCTCACCTAGAGCGTACGTGGACT
ACAATTATACGGGTGAAGAGCCGTGCGCTGAACCCTATGTCAATGGCATT
CGTAATTCGTTCCCCGATCCAAAAGAAAGACTGCTGTTTCTTCGCAAGTA
CTATCAGCTTTTGCTTCATGGAAAGTTtccacaaaaagaaaagaaattgt
gtCTTGTTGGGAAATCCGACAGTGGAAAGACCAGTTGGTTTGGTGCCTTT
CAAGGTGAGtttttttATTCAGTATCGGAATTTGGCCTTTCGTGTTGCAT
TTTCTACTGTGGTTTTGAGTGCATAAACATCGAAGAGGCAAAAAAGATAA
attgatttatatttttctaggCATCATCCCAAGTCAGTTAATCGCCGGTG
TAATGAATGACGGTAAATTCTCGGCATCACTCATCACAGCACGTACTCAG
ATAGTGATGATGGACGAGTGGACGCCCGATAGCAAGAATGAACATTGTGC
AAGTCTATCTGAATGATATCTGcatttttgacatttcatttagttttagc
actttcattttctttaccctgacgagtttttGGAAGTTGAGATATGTAGC
GTATTCActtttgtatactattcacttttcttggagtagtttttaacacg
ttctttctttctttcttttaaccAAGCGGATTGATTTTCGTCCCACAGAA
GCATAAGGGTGCCTCAAGATTGAAATACAACTCGGGATTCTACATCGCAA
CTAACAATTACCCTGATTTTGGAAACGACAATGACAACAACGCAATCAAA
AATCCTTTGGAAATCTCTAATACAAAGTCTCTGACAAAGACCCACGGATT
TCTCGTAAGTGATTGCTTTACATGCATAAGATATATACGAGTCTAGAAAC
GGATTTTCAATGCAAAAACTCTGCTATTATTTTGTACAAAATATGACTGG
CATATGTCAAAAAGGAAAATCTTcataattgaaacttatttttATGTCGT
AATTACTTGATTTCTTTTCGCATTAACCAAATCAATCACATTGGGAATTG
AATGTCTTTTGATCAAACAAGgcattttcaactttttgtaatcTATATAT
TGAATGACTTTTCCGGAGACATAGTGTAGCATCATGTTTTCACTTTACCA
GGTTGGCTCCGTGTCAATTGCATGCTCGTTTTCCACTACGTTGCTCACAT
TTTGAGGAACGAACCACTTTTCGATACAAGCATGGAAGACGACAGTGACG
TATCAGATGGCGAAGACGGAAACTCTCTAGACGTCAACACCAGTGGCCGT
GGAGCCATTTACAATGACTTCGACAATGATCCTCAGGCGGCTCTATTCGA
AGAAGACGTCGACGAATTTTGTTTTTCACAAACATCAAATCTACGTCCGA
GCAACAGTAACGATAGCAGCGCGTCCGTACAAGAAGCTGTAGACCACGCT
GTTATGTCTGAAGACAGAGCCGTTGGAGTCATCTACAACCACCTGACTTG
GGAGTCAGAGCTTTTTGACAACACGTCTGACCACTGCGACAATGCATATT
GTGAGAAGCTGTTCGAGTTGGTGCAAAACGTTGATAACTGCTGGGATAAA
CTTGGTGTGAGTCCGGAGGCTGTAGCAATGTTCAAACGTCCTAATGAGAC
CAAGTGGGACCTGCCTGACATCGTCTATGACGCCTGGCTTGTGAAACATG
GACTCGAAAGACCGTTTTTCGACTACCACCTGTTCTTTGACATTCTCTAT
CCAGAGTTGGCAGACATGCTAATAAAAAATCTGACACAAAGCCAACAGAC
CCACAACGAAAACGACGAAACAATACCACCCTACAGGTCACAGTCGTCGG
CATCCGTCAGGGAGAACCAAAGCCAAGAAACTCGCccaagccaagaagct
cgcccaagccaagaagttcgcccgagccaaaaagttcgcccaagccaagA
AGTTCGGCCAACCCAAGAAGTTCGTCCAACCCAAGAAGTTCGCCCAACCC
AAGAAGCTCTCCCAAGCCAAGAAGCTCACCCAAACCAAGAAGTTCCCCAA
GAGGCCGATGATCACATACCATCGTATCAACTGCCATCATCAAAATCCAG
CTCAAGCTCTTCAGAGGACTCCGAAAATGAAAATAGCCCCCTTCGCAAGA
AGAGAAAGACGAGAACAGTCGTCTCTGAAACTGAAGACGAGGAGGCAACG
ATTACCGAGGCAGAGAAACTAAATTTCCTAACGCCCGTTCTGAATAGTAC
TCCAGAAAAAAGACAATCGACAACTTGAGCGGAACACAACAATCTTGTC Coding sequence (CDS) from alignment at sc0000103_pilon:273690..277238+ >XLOC_015693 ID=XLOC_015693|Name=XLOC_015693|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5106bp|location=Sequence derived from alignment at sc0000103_pilon:273690..277238+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTGCTGTGGAGCAgaagaaaaatggtcaaaaactcCGCCTACCCGGACT
TTCATTTTGGTTCATGTTTGATTGGCCTGAATACGCGCTAAGCTCATTTG
AAAACCTGCTGACCAAATTGTTCATGTCCATTGGTTTGGAACATTTGAGA
CGTAAAGCAATCAATGGAAGAGAGTGCTGTGGAGCAgaagaaaaatggtc
aaaaactcCGCCTACCCGGACTTTCATTTTGGTTCATGTTTGATTGGCCT
GAATACGCGCTAAGCTCATTTGAAAACCTGCTGACCAAATTGTTCATGTC
CATTGGTTTGGAACATTTGAGACGTAAAGCAATCAATGGAAGAGCTAAGA
CCACCGTTTTGGAGAAATGTCTCGCTTCATTGTGCATCACTTTCAAGGAT
CACGCCAACGATAGTCTTCTTCACTTTATGACGAAAAGCCAAACCCGCTG
TTTAAAAGAAGAAACCACCAAAGAAAATGTCGATCTTGAAACCGTTGAGC
TGACCGAAGGCACATACCACTCGAGCCAGCATCTAGCAACACTATTTCTT
TCAAAACGAATGAACCTGAAATGTGCCGAAGAGCTGGAGGCAGCAAAAAT
CAACTTGCAGCAGTACCTCCAGCTGAAAATTGTGGACGAAAGTGCTAAGA
CCACCGTTTTGGAGAAATGTCTCGCTTCATTGTGCATCACTTTCAAGGAT
CACGCCAACGATAGTCTTCTTCACTTTATGACGAAAAGCCAAACCCGCTG
TTTAAAAGAAGAAACCACCAAAGAAAATGTCGATCTTGAAACCGTTGAGC
TGACCGAAGGCACATACCACTCGAGCCAGCATCTAGCAACACTATTTCTT
TCAAAACGAATGAACCTGAAATGTGCCGAAGAGCTGGAGGCAGCAAAAAT
CAACTTGCAGCAGTACCTCCAGCTGAAAATTGTGGACGAAAGTGgagACA
CAGGCATCCCGCGGATGAAACCTTCAAACAAGTTGAATCAAGCTGTAGAT
ATTGTGCGTCGGTACATGGAGAAATTCAAATATGGCTTGTACGAAGGCTC
CGTTTATAAAAAGCCACGCGTGGCCAAGTTCACCTACGTTTATTGTTCAG
ACGTCCATTCATTTATCCATCATATTGGGTAATTCTGAAGTTGCGGATGT
CATTGTATCGTACGTCGTATTTTGTACATCGTTTCCTTGCTTTCTGTAAA
ATCATGTCGGATGATCGACCCCATAGAAATTGATTTTAATTACATCGAAG
TCAAACCACTTGGGACATGCTTTAACATAGAAGGAAAACGCTTTGAGGTT
GATCCTGCTAGTCTGAAAGgagACACAGGCATCCCGCGGATGAAACCTTC
AAACAAGTTGAATCAAGCTGTAGATATTGTGCGTCGGTACATGGAGAAAT
TCAAATATGGCTTGTACGAAGGCTCCGTTTATAAAAAGCCACGCGTGGCC
AAGTTCACCTACGTTTATTGTTCAGACGTCCATTCATTTATCCATCATAT
TGGGTAATTCTGAAGTTGCGGATGTCATTGTATCGTACGTCGTATTTTGT
ACATCGTTTCCTTGCTTTCTGTAAAATCATGTCGGATGATCGACCCCATA
GAAATTGATTTTAATTACATCGAAGTCAAACCACTTGGGACATGCTTTAA
CATAGAAGGAAAACGCTTTGAGGTTGATCCTGCTAGTCTGAAAGGCTCAC
CTAGAGCGTACGTGGACTACAATTATACGGGTGAAGAGCCGTGCGCTGAA
CCCTATGTCAATGGCATTCGTAATTCGTTCCCCGATCCAAAAGAAAGACT
GCTGTTTCTTCGCAAGTACTATCAGCTTTTGCTTCATGGAAAGTTtccac
aaaaagaaaagaaattgtgtCTTGTTGGGAAATCCGACAGTGGAAAGACC
AGTTGGTTTGGTGCCTTTCAAGGCTCACCTAGAGCGTACGTGGACTACAA
TTATACGGGTGAAGAGCCGTGCGCTGAACCCTATGTCAATGGCATTCGTA
ATTCGTTCCCCGATCCAAAAGAAAGACTGCTGTTTCTTCGCAAGTACTAT
CAGCTTTTGCTTCATGGAAAGTTtccacaaaaagaaaagaaattgtgtCT
TGTTGGGAAATCCGACAGTGGAAAGACCAGTTGGTTTGGTGCCTTTCAAG
gCATCATCCCAAGTCAGTTAATCGCCGGTGTAATGAATGACGGTAAATTC
TCGGCATCACTCATCACAGCACGTACTCAGATAGTGATGATGGACGAGTG
GACGCCCGATAgCATCATCCCAAGTCAGTTAATCGCCGGTGTAATGAATG
ACGGTAAATTCTCGGCATCACTCATCACAGCACGTACTCAGATAGTGATG
ATGGACGAGTGGACGCCCGATAtttttaacacgttctttctttctttctt
ttaaccAAGCGGATTGATTTTCGTCCCACAGAAGCATAAGGGTGCCTCAA
GATTGAAATACAACTCGGGATTCTACATCGCAACTAACAATTACCCTGAT
TTTGGAAACGACAATGACAACAACGCAATCAAAAATCCTTTGGAAATCTC
TAATACAAAGTCTCTGACAAAGACCCACGGATTTCTCGTAAtttttaaca
cgttctttctttctttcttttaaccAAGCGGATTGATTTTCGTCCCACAG
AAGCATAAGGGTGCCTCAAGATTGAAATACAACTCGGGATTCTACATCGC
AACTAACAATTACCCTGATTTTGGAAACGACAATGACAACAACGCAATCA
AAAATCCTTTGGAAATCTCTAATACAAAGTCTCTGACAAAGACCCACGGA
TTTCTCGTAAGTTGGCTCCGTGTCAATTGCATGCTCGTTTTCCACTACGT
TGCTCACATTTTGAGGAACGAACCACTTTTCGATACAAGCATGGAAGACG
ACAGTGACGTATCAGATGGCGAAGACGGAAACTCTCTAGACGTCAACACC
AGTGGCCGTGGAGCCATTTACAATGACTTCGACAATGATCCTCAGGCGGC
TCTATTCGAAGAAGACGTCGACGAATTTTGTTTTTCACAAACATCAAATC
TACGTCCGAGCAACAGTAACGATAGCAGCGCGTCCGTACAAGAAGCTGTA
GACCACGCTGTTATGTCTGAAGACAGAGCCGTTGGAGTCATCTACAACCA
CCTGACTTGGGAGTCAGAGCTTTTTGACAACACGTCTGACCACTGCGACA
ATGCATATTGTGAGAAGCTGTTCGAGTTGGTGCAAAACGTTGATAACTGC
TGGGATAAACTTGGTGTGAGTCCGGAGGCTGTAGCAATGTTCAAACGTCC
TAATGAGACCAAGTGGGACCTGCCTGACATCGTCTATGACGCCTGGCTTG
TGAAACATGGACTCGAAAGACCGTTTTTCGACTACCACCTGTTCTTTGAC
ATTCTCTATCCAGAGTTGGCAGACATGCTAATAAAAAATCTGACACAAAG
CCAACAGACCCACAACGAAAACGACGAAACAATACCACCCTACAGGTCAC
AGTCGTCGGCATCCGTCAGGGAGAACCAAAGCCAAGAAACTCGCccaagc
caagaagctcgcccaagccaagaagttcgcccgagccaaaaagttcgccc
aagccaagAAGTTCGGCCAACCCAAGAAGTTCGTCCAACCCAAGAAGTTC
GCCCAACCCAAGAAGCTCTCCCAAGCCAAGAAGCTCACCCAAACCAAGAA
GTTCCCCAAGAGGCCGATGATCACATACCATCGTATCAACTGCCATCATC
AAAATCCAGCTCAAGCTCTTCAGAGGACTCCGAAAATGAAAATAGCCCCC
TTCGCAAGAAGAGAAAGACGAGAACAGTCGTCTCTGAAACTGAAGACGAG
GAGGCAACGATTACCGAGGCAGAGAAACTAAATTTCCTAACGCCCGTTCT
GAATAGTACTCCAGAAAAAAGACAATCGACAACTTGAGCGGAACACAACA
ATCTTGTCGTTGGCTCCGTGTCAATTGCATGCTCGTTTTCCACTACGTTG
CTCACATTTTGAGGAACGAACCACTTTTCGATACAAGCATGGAAGACGAC
AGTGACGTATCAGATGGCGAAGACGGAAACTCTCTAGACGTCAACACCAG
TGGCCGTGGAGCCATTTACAATGACTTCGACAATGATCCTCAGGCGGCTC
TATTCGAAGAAGACGTCGACGAATTTTGTTTTTCACAAACATCAAATCTA
CGTCCGAGCAACAGTAACGATAGCAGCGCGTCCGTACAAGAAGCTGTAGA
CCACGCTGTTATGTCTGAAGACAGAGCCGTTGGAGTCATCTACAACCACC
TGACTTGGGAGTCAGAGCTTTTTGACAACACGTCTGACCACTGCGACAAT
GCATATTGTGAGAAGCTGTTCGAGTTGGTGCAAAACGTTGATAACTGCTG
GGATAAACTTGGTGTGAGTCCGGAGGCTGTAGCAATGTTCAAACGTCCTA
ATGAGACCAAGTGGGACCTGCCTGACATCGTCTATGACGCCTGGCTTGTG
AAACATGGACTCGAAAGACCGTTTTTCGACTACCACCTGTTCTTTGACAT
TCTCTATCCAGAGTTGGCAGACATGCTAATAAAAAATCTGACACAAAGCC
AACAGACCCACAACGAAAACGACGAAACAATACCACCCTACAGGTCACAG
TCGTCGGCATCCGTCAGGGAGAACCAAAGCCAAGAAACTCGCccaagcca
agaagctcgcccaagccaagaagttcgcccgagccaaaaagttcgcccaa
gccaagAAGTTCGGCCAACCCAAGAAGTTCGTCCAACCCAAGAAGTTCGC
CCAACCCAAGAAGCTCTCCCAAGCCAAGAAGCTCACCCAAACCAAGAAGT
TCCCCAAGAGGCCGATGATCACATACCATCGTATCAACTGCCATCATCAA
AATCCAGCTCAAGCTCTTCAGAGGACTCCGAAAATGAAAATAGCCCCCTT
CGCAAGAAGAGAAAGACGAGAACAGTCGTCTCTGAAACTGAAGACGAGGA
GGCAACGATTACCGAGGCAGAGAAACTAAATTTCCTAACGCCCGTTCTGA
ATAGTACTCCAGAAAAAAGACAATCGACAACTTGAGCGGAACACAACAAT
CTTGTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:273690..277238 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2851-3024:3376 |
| Aaloc | 1876-2847:2404 |
| Aaloc | 1657-1872:1892 |
| Aaloc | 1546-1653:1623 |
| Aaloc | 1318-1542:1279 |
| Aaloc | 1171-1314:998 |
| Aaloc | 1126-1170:948 |
| Aaloc | 946-1122:770 |
| Aaloc | 646-942:351 |
| Aaloc | 472-642:1 |
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