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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000148_pilon:598762..603127+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013216 ID=XLOC_013216|Name=XLOC_013216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4366bp|location=Sequence derived from alignment at sc0000148_pilon:598762..603127+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTATCATGAAGAAACCTGCTTGctgaaatttcttttatttttggg
ttGTTTAGCAAAAGTAGCATCTGGTAATTTCACCTTATGTGATAGTAGCG
AGATACAAAATTTCACTGgtgtacaaactacagactcTACATTCCAGACT
TTAATTCGTCGTGACTATGATgcatcaaccaatcagattacAGGAATCGA
TCATGTGACTGTTCAAGAATGTATTAAGAAAAATTGCACACAAGTTTGTA
ATGAGTTGAAATGCGAGGCCGGACAAACAGCTTGGTATAACAAGACTTGG
ACATGCCTTGATGATTCGACTTTCTTGAAAGAACAAGGTAAGCGAGACAA
AAACCATTAATCACGCGTCCATAAAGGCTGTCTTGAAGTCCGTAACGTCG
ATGTAGGGGTGTAGGGCCTACGTCGCCGGGTCAAGCGAGGATATAGCTAC
CTCACttcgtttttgaaatttcacGATTCATACTTATTTCAATAGCTTCA
TTTTTGGGCAAAATCAGTCTGAAAGAAGGCCATTTCACAGCATATCGTGC
AAACCGTTGTCATTATAATTTTAGtctccccagctggcacacaacgttgt
tttaacgttcaaataacgttatttggacgttatgaatgtcaaatggacgt
tgttttgacgttgtgtgccagctgggtcacCTTTCAGATCATGGCGTGGG
TCCTCTCATACCATTGTTATTTTTTGGAGTTGACAATGTCATGAACTAAA
CATAGACAATTCTTCGATTGTTTGGCAGTCTAAAACAACATGCTCTTAAA
GCCTTGACCATTGAATCAATAAATTAGAACTTCTAAAGGCTAGAATAAAA
TCAAACCttttcgaaaaaagtggaacCTTAAGATATTTTGTAGTATGATG
CACGTCGGATTGAGGCTAGTGCCTTTCTTAGTTTTTCCTTGGTACATCCT
TTTTAATCTGGCGTGGTTTTTCAATCTACAGTTTATGCAAAAGCCGTGTG
GAAGCTGGTCATTTATGTTTGAAATAAGTAAGTAAATCTGCgacctacct
tatcggcccttttttgcgccggcctttattggcgttatttttgggctcgt
ggcgtaataagggccggtgttagaaggaccggcgtaaaaagggcccaAAA
GGTAGATAGTAGATGGTAGAGAAGAATGGTTTCACTCTTCCTCCTTGGAA
TGCTTCACTTATCCTTGATCTTTCACCTAATTCCCGAGTAACGAGCAGCT
CGGCGTCATGATCGGGATTACATATGATTGTATTGAATTATCCAGATTCT
CTCATAATTTAATAGTAGAATAGTAAGACCctcattttattatttcagaA
TGCAATGTCAACATCAATCCTAGTGACATCAAATTCCATATACCCACTCT
TCCGCCAAATGACACCCAACTCCGTCCTATGCATTTTTTATATCAAGCAA
AGCGAACAGAGTTATGGTTTAAATTTGACTTGTATAGATGCTCTATCATT
ACTTCAAAATGTATTTCCGCCCACTACGCCCACCAAAAGGGTGATGACTC
TGGAGGATATCATTCTGGTTGGGAATGCATTACTGGCTTAGAGAATTTGa
agaaatgttttgaatttgtaaAAGCGGGAAACAGTGGAAAAGGACTGAAA
TTCAAGgtaatttctatttttcatttaacCAGCACGATGACCCTTTATCA
TCAGTGATTCGATGAAAAGAAATTGTTGTCCTTacaattttgattgattt
gtgATTTTCATATACTATAGGATTCGTGTGTTCATTTGTTTTACAACTTA
AAAATCTATTAGCTGGCGATGAATTTTACACTTCTTGCTTGCTTCAAATA
GTATGAAATTTCTGATTTTGATAGATGTTTTCATCGATAAGGGTCCAATC
TACTTAGTGACACGGGGGGAGGGGCTATATGTATTTGCTGTACATGTATG
TACCCGATTTTCTAATGACCTTTGTGTGATAAAACTTGCATTATTGATGA
AAAGTTCATTGACAAAAATGGATGAAAAAATTGACGAATTCATCTACCGA
CGATAATATTTGGCAGACGAATATTTTTGCCaaatgatttttgataattt
cgaacatttttttctgttaaaatcaAATATTGTTAATTGCTAAGTTTCAG
GTTTATGTGCTGCTTCTATGACCAAGAATTGCCAGCAGACTGACCAGTAG
CGTGGCTGCCTCCCCCAGCGGCGttttttttgtggtgggggggggggagg
gggcacCGAAAAGGAAGGAGTGCAAAAGACCCTTCAAACAGTGATTTCAG
CTCCCCTTTCCTCTTTTTACCTCACAAATGGCTGTTTTTAGCCTTATGga
gaaatggagaaaaattgcCAATCCACCACGCTATTGACCGTACTTAGTAA
TGTATAAATGGTAGAAGACATAGCAAAAACGCATTTAAATCGAACAGAAA
TTTACCGATTATCACATTTAGCAAATCATATGATCTCACTAAGCCTTGTA
ACTTTTTGTCTAATGGACTGCCCATTTGGATGCTAATCCTCATAAATGTC
ATAAATACAACTCCAGATTACATAGCATTATCAAAACACACAATGCTACT
TACTATATTTTTCTTGCATTGAAAAATTTATCTGTCTTTGaatacatccc
cttctcacagactcggtaGGATTACtgcactctggtacagagtaggataa
aaataacgaaaatgaCCGGggatttcaatcttttttgttttcaagtcaga
aaattcagtggggatcggaaaaaatagcataatattttgcagcgaggatt
ggtttatttaattattttcagtggggaaaaCAATTagtgtataattttcc
accggggatgatattttggcaaatttttccagttggaaggggtcccagtg
ggtctgtgagaagggggtgttagtTTCGGTCATCCAAAAATTCAATTACT
TTGACAGATAAAGTTGACTTTGgggatttttttaatgaaaatttttttat
gacttggcAGACTAAACACGTAAGAAATAAAACGTGGGCCGTGTATGATT
agaatttatttgaaaatattaagagTTACCGAGGAACTCGAATGAAAACT
GAAACCGTAAGAGATATTCTCTATTCTCTAAACATTGTTGGGAATCGATG
TATCTTCCGCTCCCGGGGGTAATAGGTTTatgagatgacgggtatgtccg
agctaaagttcgaaaatcgacccatTGAGACTGAGTTTCGAAAATGTTCC
CATTTTTTGACGTGTTGACACGCTTGAGGGACTATTTACCACAAATTTCA
GccaacatttttaaattttagttcaaatttcaagaatttacgAGCCTTTG
AGAGATTTGATTTtggcatgaacatataaacgactggacgtctatctttt
attgtctctttgaagcaagcttcgttgccgcctgtatttcaaaattggta
tgaaaaatccgacaatattccgtcataattttattcctttgaattattta
ggtgaaaggattgatagagcttgaacattactcctaatgcacaaaaagat
tattttcaaattttttcacaagtttgcaatatattctatcgacattttca
actctaaaatgcagaatttcaactgcgtgtatacttttgaatcccttttg
tcactccaataattttttttatgacttaaaaaaatagcttgccaaagttg
agagcctgtttcataagaatatcgaaattaaaatgtgacactctctaaaa
ttattagacacttttaagtcaaaatctagaaatattagtcggagttttga
caagctgacgatgattttgcctttgttatctttgttatgatatagataaa
cgacttgagaagagtagaacaacagagactttcgtcgaagttttgatgtt
gttagcaaggtattcccaagcggtatatcatcaaaatctattgtttcatt
ttatgcttttaacgaggcggcaacgaagctagcagccttttctacaaaaa
gacaaaggatatggatgtccagtcgtttatttgTTCatgattttggtaat
tttgcaacccttacagagactaaattgctttttaatggttttgtacccct
ttgagggaaTTTCGAAGTGTGAAAAAGATACTGGCACCCATTTTACCTGa
gtagccccccccccgggcttccTAATTGAAAGTGTATGTATTGactattt
tcattcatttatttttcagCTTGGATGTGAGGAAGAGCAACTGTCTAAAT
ACAGTGGACTGTTACTCAAAGTTCCCTTGTTTTGCACATATCAATTTGGA
AGTAGTATCATCAATAAAGAATCTTGCTTGATTGTGAAAATTTCGGGAAC
GCAGACAGGtatgtaa Coding sequence (CDS) from alignment at sc0000148_pilon:598762..603127+ >XLOC_013216 ID=XLOC_013216|Name=XLOC_013216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1584bp|location=Sequence derived from alignment at sc0000148_pilon:598762..603127+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTATCATGAAGAAACCTGCTTGctgaaatttcttttatttttggg
ttGTTTAGCAAAAGTAGCATCTGGTAATTTCACCTTATGTGATAGTAGCG
AGATACAAAATTTCACTGgtgtacaaactacagactcTACATTCCAGACT
TTAATTCGTCGTGACTATGATgcatcaaccaatcagattacAGGAATCGA
TCATGTGACTGTTCAAGAATGTATTAAGAAAAATTGCACACAAGTTTGTA
ATGAGTTGAAATGCGAGGCCGGACAAACAGCTTGGTATAACAAGACTTGG
ACATGCCTTGATGATTCGACTTTCTTGAAAGAACAAGATGACTTATCATG
AAGAAACCTGCTTGctgaaatttcttttatttttgggttGTTTAGCAAAA
GTAGCATCTGGTAATTTCACCTTATGTGATAGTAGCGAGATACAAAATTT
CACTGgtgtacaaactacagactcTACATTCCAGACTTTAATTCGTCGTG
ACTATGATgcatcaaccaatcagattacAGGAATCGATCATGTGACTGTT
CAAGAATGTATTAAGAAAAATTGCACACAAGTTTGTAATGAGTTGAAATG
CGAGGCCGGACAAACAGCTTGGTATAACAAGACTTGGACATGCCTTGATG
ATTCGACTTTCTTGAAAGAACAAGaATGCAATGTCAACATCAATCCTAGT
GACATCAAATTCCATATACCCACTCTTCCGCCAAATGACACCCAACTCCG
TCCTATGCATTTTTTATATCAAGCAAAGCGAACAGAGTTATGGTTTAAAT
TTGACTTGTATAGATGCTCTATCATTACTTCAAAATGTATTTCCGCCCAC
TACGCCCACCAAAAGGGTGATGACTCTGGAGGATATCATTCTGGTTGGGA
ATGCATTACTGGCTTAGAGAATTTGaagaaatgttttgaatttgtaaAAG
CGGGAAACAGTGGAAAAGGACTGAAATTCAAGaATGCAATGTCAACATCA
ATCCTAGTGACATCAAATTCCATATACCCACTCTTCCGCCAAATGACACC
CAACTCCGTCCTATGCATTTTTTATATCAAGCAAAGCGAACAGAGTTATG
GTTTAAATTTGACTTGTATAGATGCTCTATCATTACTTCAAAATGTATTT
CCGCCCACTACGCCCACCAAAAGGGTGATGACTCTGGAGGATATCATTCT
GGTTGGGAATGCATTACTGGCTTAGAGAATTTGaagaaatgttttgaatt
tgtaaAAGCGGGAAACAGTGGAAAAGGACTGAAATTCAAGCTTGGATGTG
AGGAAGAGCAACTGTCTAAATACAGTGGACTGTTACTCAAAGTTCCCTTG
TTTTGCACATATCAATTTGGAAGTAGTATCATCAATAAAGAATCTTGCTT
GATTGTGAAAATTTCGGGAACGCAGACAGGtatgtaaCTTGGATGTGAGG
AAGAGCAACTGTCTAAATACAGTGGACTGTTACTCAAAGTTCCCTTGTTT
TGCACATATCAATTTGGAAGTAGTATCATCAATAAAGAATCTTGCTTGAT
TGTGAAAATTTCGGGAACGCAGACAGGtatgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000148_pilon | genome | sc0000148_pilon:598762..603127 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-792:4220 |
| Aaloc | 340-645:1351 |
| Aaloc | 1-336:1 |
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