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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:2278909..2281837- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005312 ID=XLOC_005312|Name=XLOC_005312|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2929bp|location=Sequence derived from alignment at sc0000018_pilon:2278909..2281837- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAAGCAGTGTCACCACCAATCAATTCAAGTGTTACAATGATGCC
AGATTTTAATGCAGTTTTACTACCACAAGGAGCTATCAAAGAACTAAGTA
AGTTTGTTGCATATAATCTTTTTGTAACACTAAGAGCTCTACTCCTACCT
TGTACACTTGTAAATCTTGTATGCATTTGATGAAATTGCATACTTCTGAT
ATGACCATTATTTTCTTCTTTGATTTCTGCTTGACCTCCTATCTCCCTTG
CGCTTTGCATCCTTTTGTATTATAAACTTTAATTTTCCTTCTCAGAGCAT
GCATACTTAATGAATACATGCTTCCAGGGTCTTATAAAATTTTGCAATCA
GATTTTTAAGATGTTTTTATTATCAATACTCTTGGCACTTGAGATTATAA
GTTTGTGATTACAAATTTTCTACAGACACAAAGCTGATACCAACAGATGC
ACTAGCAAGAGATGTTCGATCACTAGCTGATAATCTTGGTTTCAGTAACA
CAGATATCAATTATCTTGTCAACAAACAGTATCCATTTATTTACATGTAC
GACCAATGGTTGAAAAGACATAAACAAGATGCCAAATTAAAAGCACTATA
TGCTGCTTTAATGGAAATCAGGAGGCCTGATGCTGCAGAAATTGTTGAGC
GGGTTTTGAAGGGTTTGTTTACCATGTTTTAATGATATTCAAAAAAAACT
TATTTAGAAATATGAAAAAAGTCCATTTCCTTTGATAATCGTGCACTGAA
TCTTGATTAGCTTGCCAGTTTTTTTATTAACCATGAAGATGGTCCTCAGT
CTCTTGGAAAAAAATGATGTGTCTAAGAAAAATAAAATTAAAGGGACATA
ACAGTACTTGCGAAATTTGTAAACAAACTGTATGCAGCGGATACAAAACC
AAAACAAATGTCACATGTCAAAATGAAAAATCAAACCAAATATGGGTAAT
TTTGATTGTTCAATTGTTTTACAAGTTTGTTTTGGACACGTGATTTTAAT
TGTTCTCTTTAATGACACGTGGTTCGCGCAATGTTTACATTTTACTACTT
TAATGTCCCTTTAAAGTAAGGCAAAAATAAAAAGATGAAGTGTTTCTGAA
AACTGGCTGGGTGAAAAAATCTTTTTTTCTGACCTGGCCGCAGACTATGA
GTTCATCTTAAAGAAAATCAAGTGGACTGTTCAAGCTATCAAACGTTGTT
TGGTTAGATATTCCCGTTTGTAAATCAAGTTTTGTTTGTTTTAGGCCGCA
TGAGAGCTTTTTTGTTTTTTTTTGTTTTAATAGTTTGAAAACATTATTTA
GACCTTCAAGAGCAAGATCCAAAAGAAACAATGAGGATAGAGGAAAGATA
CCTATCAACACTACAACGTTCTATTTCATGTACAACATTGGCCCTTCCTG
AGAGCTTTAATATTGCCTATGAAAGACAACAAAACTTTTCTCAAGGTGAG
TACTTTAGATATTCTTTAGATTCATCCTAGTTATAAGTGAGCTGAAGTGA
TTTGTGAAAAACACCTTGGTGGGTTCTCTGAGGCCTCAGTGAACTGAGAT
TGATTTTGAAAAGTAAAATTCTATCAATTTATAAGAAAAATCTCGAATCC
TCTCATCTGATAATAGGCCTATTCTTGGCAGGTTCATAAGACAGTTAAAA
ATGACTCCTTATGAGTCCTTATTCATATTATTTACTTTTGAAAGGTGTGC
CTGTGCCTCAAGAATTCCATAAAAGATTACAACTCAAAGATCCTGAGCAA
GTGGCACCGGATGTTTTTGTTGTCTATTTCCCTGATAGCGAAAAACATGT
CAGCAATATTGTCCGATTCATTAAAAGATGCCATAAATATGGTATTGATG
CAACAACTGATATCTTTGATCCAAAGCATGCGGAAGACCGTGGTGTTTAC
ATTTATTCAAGAATGGTTGAAGCGCAGTTTGTTTTTGTGGTTTGTTCTGA
GGGATTTTTCTCAAACTCAGAAGCAATTTACAAACCAAATGTTGCTGCAG
AAGCCAGTGGTATGATATGTTTTATTTTGGCTCTGTTTCTTATGTTCGAA
CTGGATTATTTATGTTTGATTTGCTACTAGTTTTTTACAAATTTAGTACT
TAGGCGAGACCAATTTGATTAGTTGTTTTACGGGGCCGACCGACCCTGAA
ATTCTAGAAATCGAAATAAAAATAAAATTGAATAATGAAATAAAACAAAA
AATAAATAAAACATTTTTATTTTCATCACTTTACAAATTCCAAAACTTTC
AAAATTTTGGTAGTTTTTCCAAGGTTTTGAAATTTTATTTTCAATTTTTT
TATCTTATTCATGATTTCCACCTTTTTGTGTTTTTTTATTTTATATTACG
CATTTTTGTCAAGAGTAGATTTTATAGGTGAAATTCTACTTCATTTCTAT
TTTTTTGCAACTGACCGACCCTCTTTTTTTGGTAGCTTGGCCCGTAAAAC
AAAAAATTAGATTGGCCTCGCCTTATTATCTCGTTGATATACCAAAACTG
AATATATTTTTTGAACAGGCTTTGCAAATGCCATTGATTTGGTAACAACG
TGAACCTGCTTGAAATGATACATGTATTGAACACGAAACAAAAATTTTGA
AAAAAAATGCAAAAATAATAATGATTTCACACTTTTTTATTTTAGCTAAA
GGAAAAGAAGTATCATTCATTATGAAGTTTATCCTGAATGAAATATATGA
TCTTGCTGGAAACAATCCCAAATTCATCCCAGTCCTTTTCCCACATGGCA
AAGAAGATTTTATTCCATCTGTACTAAAAAGTGCAACCACTTATAAAATG
CCTGTTGACTTTGATAACCTTAGAAGACGTGTCTTTGGTATTGAAAAATA
TAAGCTTGCACCTTTGCCAGCCACAAGACCAAAGATTATTCCAAAAGTGA
TTGGTGCCAAGAAAGGGTTTTTCAGGTAA Coding sequence (CDS) from alignment at sc0000018_pilon:2278909..2281837- >XLOC_005312 ID=XLOC_005312|Name=XLOC_005312|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2154bp|location=Sequence derived from alignment at sc0000018_pilon:2278909..2281837- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAAGCAGTGTCACCACCAATCAATTCAAGTGTTACAATGATGCC
AGATTTTAATGCAGTTTTACTACCACAAGGAGCTATCAAAGAACTAAATG
GAAGAAGCAGTGTCACCACCAATCAATTCAAGTGTTACAATGATGCCAGA
TTTTAATGCAGTTTTACTACCACAAGGAGCTATCAAAGAACTAAACACAA
AGCTGATACCAACAGATGCACTAGCAAGAGATGTTCGATCACTAGCTGAT
AATCTTGGTTTCAGTAACACAGATATCAATTATCTTGTCAACAAACAGTA
TCCATTTATTTACATGTACGACCAATGGTTGAAAAGACATAAACAAGATG
CCAAATTAAAAGCACTATATGCTGCTTTAATGGAAATCAGGAGGCCTGAT
GCTGCAGAAATTGTTGAGCGGGTTTTGAAGGACACAAAGCTGATACCAAC
AGATGCACTAGCAAGAGATGTTCGATCACTAGCTGATAATCTTGGTTTCA
GTAACACAGATATCAATTATCTTGTCAACAAACAGTATCCATTTATTTAC
ATGTACGACCAATGGTTGAAAAGACATAAACAAGATGCCAAATTAAAAGC
ACTATATGCTGCTTTAATGGAAATCAGGAGGCCTGATGCTGCAGAAATTG
TTGAGCGGGTTTTGAAGGACCTTCAAGAGCAAGATCCAAAAGAAACAATG
AGGATAGAGGAAAGATACCTATCAACACTACAACGTTCTATTTCATGTAC
AACATTGGCCCTTCCTGAGAGCTTTAATATTGCCTATGAAAGACAACAAA
ACTTTTCTCAAGACCTTCAAGAGCAAGATCCAAAAGAAACAATGAGGATA
GAGGAAAGATACCTATCAACACTACAACGTTCTATTTCATGTACAACATT
GGCCCTTCCTGAGAGCTTTAATATTGCCTATGAAAGACAACAAAACTTTT
CTCAAGGTGTGCCTGTGCCTCAAGAATTCCATAAAAGATTACAACTCAAA
GATCCTGAGCAAGTGGCACCGGATGTTTTTGTTGTCTATTTCCCTGATAG
CGAAAAACATGTCAGCAATATTGTCCGATTCATTAAAAGATGCCATAAAT
ATGGTATTGATGCAACAACTGATATCTTTGATCCAAAGCATGCGGAAGAC
CGTGGTGTTTACATTTATTCAAGAATGGTTGAAGCGCAGTTTGTTTTTGT
GGTTTGTTCTGAGGGATTTTTCTCAAACTCAGAAGCAATTTACAAACCAA
ATGTTGCTGCAGAAGCCAGTGGTGTGCCTGTGCCTCAAGAATTCCATAAA
AGATTACAACTCAAAGATCCTGAGCAAGTGGCACCGGATGTTTTTGTTGT
CTATTTCCCTGATAGCGAAAAACATGTCAGCAATATTGTCCGATTCATTA
AAAGATGCCATAAATATGGTATTGATGCAACAACTGATATCTTTGATCCA
AAGCATGCGGAAGACCGTGGTGTTTACATTTATTCAAGAATGGTTGAAGC
GCAGTTTGTTTTTGTGGTTTGTTCTGAGGGATTTTTCTCAAACTCAGAAG
CAATTTACAAACCAAATGTTGCTGCAGAAGCCAGTGCTAAAGGAAAAGAA
GTATCATTCATTATGAAGTTTATCCTGAATGAAATATATGATCTTGCTGG
AAACAATCCCAAATTCATCCCAGTCCTTTTCCCACATGGCAAAGAAGATT
TTATTCCATCTGTACTAAAAAGTGCAACCACTTATAAAATGCCTGTTGAC
TTTGATAACCTTAGAAGACGTGTCTTTGGTATTGAAAAATATAAGCTTGC
ACCTTTGCCAGCCACAAGACCAAAGATTATTCCAAAAGTGATTGGTGCCA
AGAAAGGGTTTTTCAGGTAACTAAAGGAAAAGAAGTATCATTCATTATGA
AGTTTATCCTGAATGAAATATATGATCTTGCTGGAAACAATCCCAAATTC
ATCCCAGTCCTTTTCCCACATGGCAAAGAAGATTTTATTCCATCTGTACT
AAAAAGTGCAACCACTTATAAAATGCCTGTTGACTTTGATAACCTTAGAA
GACGTGTCTTTGGTATTGAAAAATATAAGCTTGCACCTTTGCCAGCCACA
AGACCAAAGATTATTCCAAAAGTGATTGGTGCCAAGAAAGGGTTTTTCAG
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:2278909..2281837 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 796-1077:283 |
| Aaloc | 481-792:1234 |
| Aaloc | 337-477:1627 |
| Aaloc | 100-333:2503 |
| Aaloc | 1-96:2930 |
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